EnhancerDB
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  3. NPTX2[ENSG00000106236.3]
Enhancers that regulate NPTX2[ENSG00000106236.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr7 98141725 98147255 enh108121 98246609 99354
Blood (T-cell)
chr7 98178925 98201595 enh9926 98246609 45014
Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube)
chr7 98189463 98189580 vista56682 98246609 57029
VISTA
chr7 98199346 98199589 vista56683 98246609 47020
VISTA
chr7 98207086 98207310 vista56684 98246609 39299
VISTA
chr7 98230525 98234935 enh56405 98246609 11674
Large Intestine
chr7 98247636 98247817 vista56685 98246609 1027
VISTA
chr7 98266945 98273675 enh9927 98246609 20336
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr7 98286893 98287005 vista56686 98246609 40284
VISTA
chr7 98309246 98313634 enh61504 98246609 62637
Blood (OCI-LY7)
chr7 98324925 98335630 enh9928 98246609 78316
Blood (OCI-LY7) Pancreas Blood (Karpas-422)
Transcript facotrs that regulate NPTX2[ENSG00000106236.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr7 98247369 98247779 GATA2 UCSC Txn Factor no Conserved 98246609 760 108544912
chr7 98247636 98247647 TFAP2A JASPAR yes 98246609 1027 26101500
chr7 98247636 98247647 TFAP2B JASPAR yes 98246609 1027 26101501
chr7 98247636 98247647 TFAP2C JASPAR yes 98246609 1027 26101502
chr7 98247637 98247646 TFAP2A JASPAR yes 98246609 1028 26101503
chr7 98247641 98247656 RUNX2 JASPAR yes 98246609 1032 26101504
chr7 98247642 98247646 LFA1 TRANSFAC yes 98246609 1033 26101505
chr7 98247643 98247653 TFEB JASPAR yes 98246609 1034 26101506
chr7 98247663 98247677 RORA JASPAR yes 98246609 1054 26101507
chr7 98247665 98247685 ESR1 JASPAR yes 98246609 1056 26101508
chr7 98247668 98247686 ESR2 JASPAR yes 98246609 1059 26101509
chr7 98247669 98247686 ESR1 JASPAR yes 98246609 1060 26101510
chr7 98247669 98247687 ESR1 JASPAR yes 98246609 1060 26101511
chr7 98247669 98247687 ESR2 JASPAR yes 98246609 1060 26101512
chr7 98247670 98247685 ESR2 JASPAR yes 98246609 1061 26101513
chr7 98247670 98247690 ESR1 JASPAR yes 98246609 1061 26101514
chr7 98247671 98247675 ESR1 TRANSFAC yes 98246609 1062 26101515
chr7 98247688 98247695 SP1 TRANSFAC yes 98246609 1079 26101516
chr7 98247688 98247701 ELF1 JASPAR yes 98246609 1079 26101517
chr7 98247690 98247695 SP1 TRANSFAC yes 98246609 1081 26101518
chr7 98247691 98247701 ETV6 JASPAR yes 98246609 1082 26101519
chr7 98247691 98247701 GABPA JASPAR yes 98246609 1082 26101520
chr7 98247693 98247699 ETS1 JASPAR yes 98246609 1084 26101521
chr7 98247693 98247699 SPI1 JASPAR yes 98246609 1084 26101522
chr7 98247697 98247709 INSM1 JASPAR yes 98246609 1088 26101523
chr7 98247701 98247716 NR2C2 JASPAR yes 98246609 1092 26101524
chr7 98247702 98247709 SP1 TRANSFAC yes 98246609 1093 26101525
chr7 98247702 98247712 SP1 JASPAR yes 98246609 1093 26101526
chr7 98247702 98247723 ZNF263 JASPAR yes 98246609 1093 26101527
chr7 98247704 98247709 SP1 TRANSFAC yes 98246609 1095 26101528
chr7 98247706 98247718 ZBTB7A JASPAR yes 98246609 1097 26101529
chr7 98247710 98247727 RXRA JASPAR yes 98246609 1101 26101530
chr7 98247725 98247739 GLIS2 JASPAR yes 98246609 1116 26101531
chr7 98247731 98247744 NR2F1 JASPAR yes 98246609 1122 26101532
chr7 98247735 98247739 ESR1 TRANSFAC yes 98246609 1126 26101533
chr7 98247742 98247754 ZBTB7A JASPAR yes 98246609 1133 26101534
chr7 98247743 98247755 ZBTB7C JASPAR yes 98246609 1134 26101535
chr7 98247759 98247763 YY1 TRANSFAC yes 98246609 1150 26101536
chr7 98247767 98247771 LFA1 TRANSFAC yes 98246609 1158 26101537
chr7 98247781 98247784 MYB TRANSFAC yes 98246609 1172 26101538
chr7 98247781 98247795 TCF7L2 JASPAR yes 98246609 1172 26101539
chr7 98247781 98247796 LEF1 JASPAR yes 98246609 1172 26101540
chr7 98247785 98247791 TCF1 TRANSFAC yes 98246609 1176 26101541
SNPs associated with NPTX2[ENSG00000106236.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr7 97402274 rs6974244 C T 844335 Heart 0.0759639 9970940
chr7 98393775 rs67312107 G A,T 134595 Pancreas 0.00906108 9975023
chr7 98234542 rs1603122 G C 12067 Uterus 0.30866 9974552
chr7 98754561 rs397768789 C CT 495381 Adrenal 0.222334 9976999
Details of NPTX2[ENSG00000106236.3]
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Genomic Location chr7:98246609-98259180[+]
TSS 98246609
Gene Name NPTX2
Ensembl ID ENSG00000106236.3
ENTREZID 4885
Uniprot
P47972
Protein Name
Neuronal pentraxin-2
Expression levels of NPTX2[ENSG00000106236.3]
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