Enhancers that regulate ALMS1[ENSG00000116127.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 73542865 73547015 enh76299 73612886 65871
chr2 73549725 73553875 enh112714 73612886 59011
chr2 73562785 73574795 enh5641 73612886 38091
chr2 73581945 73586095 enh76300 73612886 26791
chr2 73613683 73613856 vista32056 73612886 797
chr2 73639985 73645295 enh33447 73612886 27099

Transcript facotrs that regulate ALMS1[ENSG00000116127.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 73612387 73614036 POLR2A UCSC Txn Factor no Conserved 73612886 499 108432974
chr2 73612940 73613740 PHF8 UCSC Txn Factor no Conserved 73612886 54 108432975
chr2 73613686 73613691 TFAP2A TRANSFAC yes 73612886 800 22082710
chr2 73613686 73613692 MZF1 JASPAR yes 73612886 800 22082711
chr2 73613703 73613714 ESRRB JASPAR yes 73612886 817 22082712
chr2 73613727 73613738 EBF1 JASPAR yes 73612886 841 22082713
chr2 73613728 73613740 TFAP2A JASPAR yes 73612886 842 22082714
chr2 73613728 73613740 TFAP2B JASPAR yes 73612886 842 22082715
chr2 73613728 73613740 TFAP2C JASPAR yes 73612886 842 22082716
chr2 73613728 73613743 TFAP2A JASPAR yes 73612886 842 22082717
chr2 73613728 73613743 TFAP2C JASPAR yes 73612886 842 22082718
chr2 73613745 73613751 ZNF354C JASPAR yes 73612886 859 22082719
chr2 73613747 73613752 GATA2 JASPAR yes 73612886 861 22082720
chr2 73613783 73613797 ZIC1 JASPAR yes 73612886 897 22082721
chr2 73613783 73613798 ZIC3 JASPAR yes 73612886 897 22082722
chr2 73613783 73613798 ZIC4 JASPAR yes 73612886 897 22082723
chr2 73613792 73613802 RELA JASPAR yes 73612886 906 22082724
chr2 73613792 73613802 REL JASPAR yes 73612886 906 22082725
chr2 73613792 73613803 NFKB1 JASPAR yes 73612886 906 22082726
chr2 73613815 73613819 YY1 TRANSFAC yes 73612886 929 22082727
chr2 73613821 73613832 CDX2 JASPAR yes 73612886 935 22082728
chr2 73613823 73613832 CDX1 JASPAR yes 73612886 937 22082729
chr2 73613829 73613842 NFKB1 JASPAR yes 73612886 943 22082730
chr2 73613829 73613842 NFKB2 JASPAR yes 73612886 943 22082731
chr2 73613830 73613841 NFKB1 JASPAR yes 73612886 944 22082732
chr2 73613836 73613842 MZF1 JASPAR yes 73612886 950 22082733

Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 73550810 rs10206188 A C 62076 Esophagus 0.0259264 5848626
chr2 73613789 rs6546829 C G 0 Heart 0.00261372 5848842
chr2 74542525 rs140046409 C T 704605 Breast 0.0575427 5851989
chr2 73613789 rs6546829 C G 0 Thyroid 0.00639984 5848842
chr2 73613789 rs6546829 C G 0 Stomach 3.83565e-05 5848842

Genomic Location chr2:73612886-73837920[+]
TSS 73612886
Gene Name ALMS1
Ensembl ID ENSG00000116127.13
ENTREZID 7840
Uniprot
Q8TCU4
Protein Name
isoform CRA_c
Alstrom syndrome 1
Alstrom syndrome 1 splice variant
Alstrom syndrome protein 1