EnhancerDB

Enhancers that regulate SNCA[ENSG00000145335.11]

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Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears	More
chr4	90657011	90670495	enh21688	90759466	88971	Cervix (HeLa-S3) Prostate (RWPE1) Placenta Muscle (Myotube) Uterus
chr4	90671885	90680515	enh21689	90759466	78951	Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr4	90685123	90689439	enh36810	90759466	70027	Astrocyte Thyroid Prostate (RWPE1)
chr4	90716305	90724095	enh36811	90759466	35371	Esophagus Astrocyte Prostate (PC-3) Prostate (RWPE1)
chr4	90767117	90771387	enh59361	90759466	7651	Skin (Keratinocyte)
chr4	90810435	90810754	vista45397	90759466	50969	VISTA
chr4	90819588	90819848	vista45398	90759466	60122	VISTA
chr4	90834358	90839415	enh71286	90759466	74892	Neural Stem Cells (H9) Epithelial (MCF-7)
chr4	90837558	90837802	vista45399	90759466	78092	VISTA
chr4	90850750	90851156	vista45400	90759466	91284	VISTA
chr4	90859305	90863455	enh113595	90759466	99839	Brain (SK-N-MC)

Transcript facotrs that regulate SNCA[ENSG00000145335.11]

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Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id	More

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id	More
chr4	90278921	rs12642215	T	C	366329	Esophagus	0.307766	7681699
chr4	90835558	rs17806425	C	T	76092	Esophagus	0.212564	7683647
chr4	90757272	rs3756059	G	A	0	Heart	2.26323e-09	7683504
chr4	90494856	rs201567173	CT	C	150394	Ovary	0.0509952	7682731

Genomic Location	chr4:90645250-90759466[-]
TSS	90759466
Gene Name	SNCA
Ensembl ID	ENSG00000145335.11
ENTREZID	6622
Uniprot
	H6UYS5
	P37840
Protein Name
Protein Name	Alpha-synuclein