EnhancerDB
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  3. CCSER1[ENSG00000184305.10]
Enhancers that regulate CCSER1[ENSG00000184305.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 90991065 90995215 enh8091 91048686 53471
Blood (Karpas-422)
chr4 90997725 91006775 enh8092 91048686 41911
Brain (SK-N-MC) Blood (Karpas-422)
chr4 91012765 91018395 enh8093 91048686 30291
Prostate (PC-3) Blood (Karpas-422)
chr4 91019025 91023255 enh8094 91048686 25431
Skin (Keratinocyte) Placenta Blood (Karpas-422)
chr4 91032005 91037215 enh97493 91048686 11471
Epithelial (MCF-7)
chr4 91037765 91043435 enh54845 91048686 5251
Peripheral Blood (MM.1S) Large Intestine
chr4 91039777 91039927 vista45401 91048686 8759
VISTA
chr4 91049597 91049943 vista45402 91048686 911
VISTA
chr4 91056845 91060995 enh97494 91048686 8159
Epithelial (MCF-7)
chr4 91079325 91083475 enh97495 91048686 30639
Epithelial (MCF-7)
chr4 91093885 91098195 enh83192 91048686 45199
Stomach Prostate (PC-3) Lung (PC-9) Epithelial (MCF-7)
chr4 91100905 91108035 enh21690 91048686 52219
Placenta Large Intestine Epithelial (MCF-7)
chr4 91110369 91110717 vista45403 91048686 61683
VISTA
chr4 91117350 91121500 enh71288 91048686 68664
Neural Stem Cells (H9)
chr4 91129145 91138735 enh21691 91048686 80459
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript facotrs that regulate CCSER1[ENSG00000184305.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr4 91048336 91049929 POLR2A UCSC Txn Factor no Conserved 91048686 350 108533107
chr4 91049485 91049900 E2F1 UCSC Txn Factor no Conserved 91048686 799 108533108
chr4 91049605 91049620 RUNX2 JASPAR yes 91048686 919 49259150
chr4 91049608 91049614 SOX10 JASPAR yes 91048686 922 49259151
chr4 91049619 91049633 NR2F1 JASPAR yes 91048686 933 49259152
chr4 91049638 91049658 RREB1 JASPAR yes 91048686 952 49259153
chr4 91049644 91049664 RREB1 JASPAR yes 91048686 958 49259154
chr4 91049646 91049666 RREB1 JASPAR yes 91048686 960 49259155
chr4 91049648 91049668 RREB1 JASPAR yes 91048686 962 49259156
chr4 91049650 91049670 RREB1 JASPAR yes 91048686 964 49259157
chr4 91049652 91049672 RREB1 JASPAR yes 91048686 966 49259158
chr4 91049666 91049677 NRF1 JASPAR yes 91048686 980 49259159
chr4 91049667 91049678 NRF1 JASPAR yes 91048686 981 49259160
chr4 91049668 91049679 NRF1 JASPAR yes 91048686 982 49259161
chr4 91049669 91049680 NRF1 JASPAR yes 91048686 983 49259162
chr4 91049670 91049681 NRF1 JASPAR yes 91048686 984 49259163
chr4 91049671 91049682 NRF1 JASPAR yes 91048686 985 49259164
chr4 91049672 91049683 NRF1 JASPAR yes 91048686 986 49259165
chr4 91049674 91049685 NRF1 JASPAR yes 91048686 988 49259166
chr4 91049690 91049693 MYB TRANSFAC yes 91048686 1004 49259167
chr4 91049696 91049714 ESR1 JASPAR yes 91048686 1010 49259168
chr4 91049704 91049713 ZEB1 JASPAR yes 91048686 1018 49259169
chr4 91049707 91049712 USF2 TRANSFAC yes 91048686 1021 49259170
chr4 91049719 91049733 PAX6 JASPAR yes 91048686 1033 49259171
chr4 91049736 91049745 RUNX2 JASPAR yes 91048686 1050 49259172
chr4 91049736 91049746 RUNX3 JASPAR yes 91048686 1050 49259173
chr4 91049740 91049751 USF1 JASPAR yes 91048686 1054 49259174
chr4 91049740 91049751 USF2 JASPAR yes 91048686 1054 49259175
chr4 91049753 91049771 ESR1 JASPAR yes 91048686 1067 49259176
chr4 91049808 91049823 NR2C2 JASPAR yes 91048686 1122 49259177
chr4 91049809 91049823 RXRB JASPAR yes 91048686 1123 49259178
chr4 91049809 91049823 RXRG JASPAR yes 91048686 1123 49259179
chr4 91049890 91049895 GATA2 JASPAR yes 91048686 1204 49259180
chr4 91049906 91049924 SRF JASPAR yes 91048686 1220 49259181
chr4 91049908 91049923 MEF2A JASPAR yes 91048686 1222 49259182
chr4 91049908 91049926 SRF JASPAR yes 91048686 1222 49259183
chr4 91049909 91049924 MEF2C JASPAR yes 91048686 1223 49259184
chr4 91049910 91049922 MEF2A JASPAR yes 91048686 1224 49259185
chr4 91049910 91049922 MEF2B JASPAR yes 91048686 1224 49259186
chr4 91049910 91049922 MEF2D JASPAR yes 91048686 1224 49259187
chr4 91049911 91049921 MEF2A JASPAR yes 91048686 1225 49259188
chr4 91049912 91049916 YY1 TRANSFAC yes 91048686 1226 49259189
chr4 91049912 91049923 HOXA10 JASPAR yes 91048686 1226 49259190
chr4 91049913 91049922 CDX1 JASPAR yes 91048686 1227 49259191
chr4 91049913 91049924 CDX2 JASPAR yes 91048686 1227 49259192
chr4 91049916 91049936 TBX19 JASPAR yes 91048686 1230 49259193
chr4 91049918 91049934 T JASPAR yes 91048686 1232 49259194
chr4 91049925 91049936 TBX20 JASPAR yes 91048686 1239 49259195
chr4 91049925 91049938 EOMES JASPAR yes 91048686 1239 49259196
chr4 91049926 91049937 CEBPA JASPAR yes 91048686 1240 49259197
chr4 91049927 91049937 CEBPB JASPAR yes 91048686 1241 49259198
chr4 91049927 91049937 CEBPD JASPAR yes 91048686 1241 49259199
chr4 91049927 91049937 CEBPE JASPAR yes 91048686 1241 49259200
chr4 91049927 91049938 CEBPB JASPAR yes 91048686 1241 49259201
SNPs associated with CCSER1[ENSG00000184305.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 90333972 rs138290969 T G 714714 Heart 0.218765 7681924
chr4 90204484 rs10516831 G C 844202 Breast 0.369546 7681112
chr4 91106823 rs145108320 A G 0 Lung 0.167359 7684592
Details of CCSER1[ENSG00000184305.10]
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Genomic Location chr4:91048686-92523064[+]
TSS 91048686
Gene Name CCSER1
Ensembl ID ENSG00000184305.10
ENTREZID 401145
Uniprot
Q9C0I3
Protein Name
Serine-rich coiled-coil domain-containing protein 1
Expression levels of CCSER1[ENSG00000184305.10]
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