EnhancerDB
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Enhancers that regulate SYT3[ENSG00000213023.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 51089845 51093995 enh91235 51171651 77656
Bone Marrow (K562)
chr19 51102945 51107095 enh91236 51171651 64556
Bone Marrow (K562)
chr19 51104864 51105235 vista29815 51171651 66416
VISTA
chr19 51111018 51111676 vista29816 51171651 59975
VISTA
chr19 51149630 51149985 vista29817 51171651 21666
VISTA
chr19 51151399 51151595 vista29818 51171651 20056
VISTA
chr19 51166998 51167396 vista29819 51171651 4255
VISTA
chr19 51182448 51182932 vista29820 51171651 10797
VISTA
chr19 51197974 51198378 vista29821 51171651 26323
VISTA
chr19 51198423 51198838 vista29822 51171651 26772
VISTA
chr19 51221435 51221859 vista29823 51171651 49784
VISTA
chr19 51224129 51224276 vista29824 51171651 52478
VISTA
chr19 51229595 51234075 enh18148 51171651 57944
Bone Marrow (K562) Muscle (A673) Placenta Brain (SK-N-SH)
chr19 51241425 51255455 enh18149 51171651 69774
Bone Marrow (K562) Placenta
chr19 51260405 51265375 enh18150 51171651 88754
Bone Marrow (K562) Placenta
Transcript facotrs that regulate SYT3[ENSG00000213023.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 51166613 51167480 ZNF274 GTRD no Blood (GM12878) 51171651 4171 108425162
chr19 51166642 51167112 CTCF UCSC Txn Factor no Conserved 51171651 4539 108425163
chr19 51166670 51168097 ZNF274 GTRD no Bone Marrow (K562) 51171651 3554 108425164
chr19 51166689 51167808 ZNF274 GTRD no Blood (GM12878) 51171651 3843 108425165
chr19 51166728 51167018 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 51171651 4633 108425166
chr19 51166752 51167002 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 51171651 4649 108425167
chr19 51166765 51167009 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 51171651 4642 108425168
chr19 51166767 51167023 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 51171651 4628 108425169
chr19 51166798 51167028 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 51171651 4623 108425170
chr19 51166817 51167737 ZNF274 GTRD no Blood (GM12878) 51171651 3914 108425171
chr19 51166828 51167567 ZNF274 GTRD no Bone Marrow (K562) 51171651 4084 108425172
chr19 51166838 51167665 ZNF274 GTRD no Bone Marrow (K562) 51171651 3986 108425173
chr19 51166871 51167697 ZNF274 GTRD no Bone Marrow (K562) 51171651 3954 108425174
chr19 51166876 51167546 ZNF274 GTRD no Bone Marrow (K562) 51171651 4105 108425175
chr19 51166876 51167645 ZNF274 GTRD no Blood (GM12878) 51171651 4006 108425176
chr19 51166909 51167585 ZNF274 GTRD no Bone Marrow (K562) 51171651 4066 108425177
chr19 51166922 51167519 ZNF274 GTRD no Bone Marrow (K562) 51171651 4132 108425178
chr19 51166932 51167570 ZNF274 GTRD no Blood (GM12878) 51171651 4081 108425179
chr19 51166942 51167641 ZNF274 GTRD no Blood (GM12878) 51171651 4010 108425180
chr19 51166952 51167455 ZNF274 GTRD no Bone Marrow (K562) 51171651 4196 108425181
chr19 51166954 51167605 ZNF274 GTRD no Blood (GM12878) 51171651 4046 108425182
chr19 51166966 51167481 ZNF274 GTRD no Blood (GM12878) 51171651 4170 108425183
chr19 51166969 51167505 ZNF274 GTRD no Bone Marrow (K562) 51171651 4146 108425184
chr19 51166977 51167546 ZNF274 GTRD no Bone Marrow (K562) 51171651 4105 108425185
chr19 51166979 51167443 ZNF274 GTRD no Bone Marrow (K562) 51171651 4208 108425186
chr19 51166987 51167488 ZNF274 GTRD no Bone Marrow (K562) 51171651 4163 108425187
chr19 51166998 51167013 FOXP1 JASPAR yes 51171651 4638 70869715
chr19 51166998 51167019 IRF1 JASPAR yes 51171651 4632 70869716
chr19 51166999 51167014 FOXP1 JASPAR yes 51171651 4637 70869717
chr19 51167001 51167016 FOXP1 JASPAR yes 51171651 4635 70869718
chr19 51167002 51167023 IRF1 JASPAR yes 51171651 4628 70869719
chr19 51167003 51167018 FOXP1 JASPAR yes 51171651 4633 70869720
chr19 51167003 51167024 IRF1 JASPAR yes 51171651 4627 70869721
chr19 51167007 51167028 IRF1 JASPAR yes 51171651 4623 70869722
chr19 51167008 51167023 FOXP1 JASPAR yes 51171651 4628 70869723
chr19 51167008 51167029 IRF1 JASPAR yes 51171651 4622 70869724
chr19 51167009 51167030 IRF1 JASPAR yes 51171651 4621 70869725
chr19 51167009 51167580 ZNF274 GTRD no Bone Marrow (K562) 51171651 4071 108425188
chr19 51167010 51167568 ZNF274 GTRD no Bone Marrow (K562) 51171651 4083 108425189
chr19 51167013 51167028 FOXP1 JASPAR yes 51171651 4623 70869726
chr19 51167013 51167034 IRF1 JASPAR yes 51171651 4617 70869727
chr19 51167013 51167482 ZNF274 GTRD no Bone Marrow (K562) 51171651 4169 108425190
chr19 51167014 51167029 FOXP1 JASPAR yes 51171651 4622 70869728
chr19 51167015 51167585 ZNF274 GTRD no Blood (GM12878) 51171651 4066 108425191
chr19 51167030 51167511 ZNF274 GTRD no Blood (GM12878) 51171651 4140 108425192
chr19 51167039 51167042 MYB TRANSFAC yes 51171651 4609 70869729
chr19 51167039 51167055 ZNF143 JASPAR yes 51171651 4596 70869730
chr19 51167047 51167054 NKX3-1 JASPAR yes 51171651 4597 70869731
chr19 51167048 51167492 ZNF274 GTRD no Bone Marrow (K562) 51171651 4159 108425193
chr19 51167049 51167564 ZNF274 GTRD no Blood (GM12878) 51171651 4087 108425194
chr19 51167057 51167424 ZNF274 GTRD no Bone Marrow (K562) 51171651 4227 108425195
chr19 51167058 51167412 ZNF274 GTRD no Bone Marrow (K562) 51171651 4239 108425196
chr19 51167063 51167068 ETS2 TRANSFAC yes 51171651 4583 70869732
chr19 51167087 51167439 ZNF274 GTRD no Bone Marrow (K562) 51171651 4212 108425197
chr19 51167089 51167437 ZNF274 GTRD no Bone Marrow (K562) 51171651 4214 108425198
chr19 51167090 51167100 HOXA13 JASPAR yes 51171651 4551 70869733
chr19 51167090 51167100 HOXB13 JASPAR yes 51171651 4551 70869734
chr19 51167090 51167100 HOXD13 JASPAR yes 51171651 4551 70869735
chr19 51167090 51167449 ZNF274 GTRD no Blood (GM12878) 51171651 4202 108425199
chr19 51167091 51167548 ZNF274 GTRD no Bone Marrow (K562) 51171651 4103 108425200
chr19 51167102 51167106 YY1 TRANSFAC yes 51171651 4545 70869736
chr19 51167103 51167115 FOXI1 JASPAR yes 51171651 4536 70869737
chr19 51167103 51167118 FOXP1 JASPAR yes 51171651 4533 70869738
chr19 51167104 51167116 FOXC2 JASPAR yes 51171651 4535 70869739
chr19 51167106 51167117 FOXA1 JASPAR yes 51171651 4534 70869740
chr19 51167106 51167121 FOXA1 JASPAR yes 51171651 4530 70869741
chr19 51167107 51167119 FOXI1 JASPAR yes 51171651 4532 70869742
chr19 51167107 51167122 FOXP1 JASPAR yes 51171651 4529 70869743
chr19 51167108 51167119 FOXP2 JASPAR yes 51171651 4532 70869744
chr19 51167108 51167120 FOXC2 JASPAR yes 51171651 4531 70869745
chr19 51167108 51167122 FOXF2 JASPAR yes 51171651 4529 70869746
chr19 51167109 51167117 FOXG1 JASPAR yes 51171651 4534 70869747
chr19 51167109 51167117 FOXO3 JASPAR yes 51171651 4534 70869748
chr19 51167109 51167120 FOXB1 JASPAR yes 51171651 4531 70869749
chr19 51167109 51167120 FOXC1 JASPAR yes 51171651 4531 70869750
chr19 51167110 51167121 FOXA1 JASPAR yes 51171651 4530 70869751
chr19 51167110 51167125 MEF2A JASPAR yes 51171651 4526 70869752
chr19 51167111 51167126 MEF2C JASPAR yes 51171651 4525 70869753
chr19 51167112 51167124 MEF2A JASPAR yes 51171651 4527 70869754
chr19 51167114 51167118 YY1 TRANSFAC yes 51171651 4533 70869755
chr19 51167134 51167154 PPARG JASPAR yes 51171651 4497 70869756
chr19 51167149 51167161 MEF2A JASPAR yes 51171651 4490 70869757
chr19 51167149 51167161 MEF2B JASPAR yes 51171651 4490 70869758
chr19 51167149 51167161 MEF2D JASPAR yes 51171651 4490 70869759
chr19 51167150 51167160 MEF2A JASPAR yes 51171651 4491 70869760
chr19 51167158 51167179 IRF1 JASPAR yes 51171651 4472 70869761
chr19 51167160 51167171 FLI1 JASPAR yes 51171651 4480 70869762
chr19 51167160 51167173 ELF3 JASPAR yes 51171651 4478 70869763
chr19 51167160 51167175 STAT2 JASPAR yes 51171651 4476 70869764
chr19 51167161 51167171 GABPA JASPAR yes 51171651 4480 70869765
chr19 51167161 51167172 ELF5 JASPAR yes 51171651 4479 70869766
chr19 51167161 51167173 EHF JASPAR yes 51171651 4478 70869767
chr19 51167161 51167174 ELF1 JASPAR yes 51171651 4477 70869768
chr19 51167161 51167175 SPI1 JASPAR yes 51171651 4476 70869769
chr19 51167161 51167175 SPIC JASPAR yes 51171651 4476 70869770
chr19 51167162 51167169 SPI1 JASPAR yes 51171651 4482 70869771
chr19 51167162 51167170 FEV JASPAR yes 51171651 4481 70869772
chr19 51167162 51167183 IRF1 JASPAR yes 51171651 4468 70869773
chr19 51167164 51167169 ETS2 TRANSFAC yes 51171651 4482 70869774
chr19 51167164 51167179 PRDM1 JASPAR yes 51171651 4472 70869775
chr19 51167165 51167186 ZNF263 JASPAR yes 51171651 4465 70869776
chr19 51167168 51167189 ZNF263 JASPAR yes 51171651 4462 70869777
chr19 51167169 51167184 FOXP1 JASPAR yes 51171651 4467 70869778
chr19 51167172 51167193 ZNF263 JASPAR yes 51171651 4458 70869779
chr19 51167173 51167194 IRF1 JASPAR yes 51171651 4457 70869780
chr19 51167174 51167195 ZNF263 JASPAR yes 51171651 4456 70869781
chr19 51167175 51167190 PRDM1 JASPAR yes 51171651 4461 70869782
chr19 51167176 51167197 ZNF263 JASPAR yes 51171651 4454 70869783
chr19 51167177 51167198 IRF1 JASPAR yes 51171651 4453 70869784
chr19 51167179 51167200 IRF1 JASPAR yes 51171651 4451 70869785
chr19 51167180 51167201 ZNF263 JASPAR yes 51171651 4450 70869786
chr19 51167181 51167196 PRDM1 JASPAR yes 51171651 4455 70869787
chr19 51167181 51167202 IRF1 JASPAR yes 51171651 4449 70869788
chr19 51167183 51167198 PRDM1 JASPAR yes 51171651 4453 70869789
chr19 51167185 51167206 IRF1 JASPAR yes 51171651 4445 70869790
chr19 51167187 51167202 PRDM1 JASPAR yes 51171651 4449 70869791
chr19 51167187 51167208 IRF1 JASPAR yes 51171651 4443 70869792
chr19 51167189 51167210 IRF1 JASPAR yes 51171651 4441 70869793
chr19 51167191 51167212 IRF1 JASPAR yes 51171651 4439 70869794
chr19 51167192 51167207 FOXP1 JASPAR yes 51171651 4444 70869795
chr19 51167192 51167213 IRF1 JASPAR yes 51171651 4438 70869796
chr19 51167193 51167208 STAT2 JASPAR yes 51171651 4443 70869797
chr19 51167193 51167214 IRF1 JASPAR yes 51171651 4437 70869798
chr19 51167194 51167209 FOXP1 JASPAR yes 51171651 4442 70869799
chr19 51167194 51167215 IRF1 JASPAR yes 51171651 4436 70869800
chr19 51167196 51167211 FOXP1 JASPAR yes 51171651 4440 70869801
chr19 51167197 51167212 FOXP1 JASPAR yes 51171651 4439 70869802
chr19 51167198 51167213 FOXP1 JASPAR yes 51171651 4438 70869803
chr19 51167198 51167546 ZNF274 GTRD no Bone Marrow (K562) 51171651 4105 108425201
chr19 51167199 51167214 FOXP1 JASPAR yes 51171651 4437 70869804
chr19 51167200 51167215 FOXP1 JASPAR yes 51171651 4436 70869805
chr19 51167201 51167216 FOXP1 JASPAR yes 51171651 4435 70869806
chr19 51167202 51167217 FOXP1 JASPAR yes 51171651 4434 70869807
chr19 51167204 51168088 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 51171651 3563 108425202
chr19 51167223 51167238 AR JASPAR yes 51171651 4413 70869808
chr19 51167228 51167234 LEF1 TRANSFAC yes 51171651 4417 70869809
chr19 51167228 51167234 SOX10 JASPAR yes 51171651 4417 70869810
chr19 51167234 51167240 MZF1 JASPAR yes 51171651 4411 70869811
chr19 51167262 51167272 SREBF1 JASPAR yes 51171651 4379 70869812
chr19 51167262 51167272 SREBF2 JASPAR yes 51171651 4379 70869813
chr19 51167300 51167306 ZNF354C JASPAR yes 51171651 4345 70869814
chr19 51167338 51167358 ESR1 JASPAR yes 51171651 4293 70869815
chr19 51167341 51167359 ESR2 JASPAR yes 51171651 4292 70869816
chr19 51167343 51167358 ESR2 JASPAR yes 51171651 4293 70869817
chr19 51167343 51167363 ESR1 JASPAR yes 51171651 4288 70869818
chr19 51167351 51167360 HIC2 JASPAR yes 51171651 4291 70869819
chr19 51167354 51167364 SP1 JASPAR yes 51171651 4287 70869820
chr19 51167358 51167379 IRF1 JASPAR yes 51171651 4272 70869821
chr19 51167358 51167379 ZNF263 JASPAR yes 51171651 4272 70869822
chr19 51167360 51167375 PRDM1 JASPAR yes 51171651 4276 70869823
chr19 51167361 51167382 ZNF263 JASPAR yes 51171651 4269 70869824
chr19 51167364 51167385 IRF1 JASPAR yes 51171651 4266 70869825
chr19 51167365 51167380 FOXP1 JASPAR yes 51171651 4271 70869826
chr19 51167365 51167386 IRF1 JASPAR yes 51171651 4265 70869827
chr19 51167369 51167390 IRF1 JASPAR yes 51171651 4261 70869828
chr19 51167371 51167386 PRDM1 JASPAR yes 51171651 4265 70869829
chr19 51167371 51167386 STAT2 JASPAR yes 51171651 4265 70869830
chr19 51167372 51167386 SPIC JASPAR yes 51171651 4265 70869831
chr19 51167372 51167386 STAT1 JASPAR yes 51171651 4265 70869832
chr19 51167373 51167394 IRF1 JASPAR yes 51171651 4257 70869833
chr19 51167374 51167389 FOXP1 JASPAR yes 51171651 4262 70869834
chr19 51167374 51167395 IRF1 JASPAR yes 51171651 4256 70869835
chr19 51167376 51167391 FOXP1 JASPAR yes 51171651 4260 70869836
chr19 51167378 51167393 FOXP1 JASPAR yes 51171651 4258 70869837
chr19 51167379 51167394 FOXP1 JASPAR yes 51171651 4257 70869838
chr19 51167380 51167395 FOXP1 JASPAR yes 51171651 4256 70869839
chr19 51167381 51167396 FOXP1 JASPAR yes 51171651 4255 70869840
SNPs associated with SYT3[ENSG00000213023.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of SYT3[ENSG00000213023.5]
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Genomic Location chr19:51124564-51171651[-]
TSS 51171651
Gene Name SYT3
Ensembl ID ENSG00000213023.5
ENTREZID 84258
Uniprot
Q9BQG1
A0A024R4I9
Protein Name
isoform CRA_a
Synaptotagmin III
Synaptotagmin-3
Expression levels of SYT3[ENSG00000213023.5]
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