Information for 4-CAGTCCACAGTT (Motif 5)

A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets185.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCACAGTT
SSAATCCACANN-
A C G T A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCACAGTT
TCCAATCCACA---
A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGTCCACAGTT---
GGGTCCAAAGGTCAC
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGTCCACAGTT
--ATCCAC----
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGTCCACAGTT
NAAACCACAG--
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGTCCACAGTT
NWAACCACADNN
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

SCRT1/MA0743.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGTCCACAGTT----
AATTCAACAGGTGGTT
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGTCCACAGTT
-AAACCACAGAN
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

MYB/MA0100.3/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGTCCACAGTT---
-----NNCAGTTGNN
A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCACAGTT--
CANAGNNCAAAGTCCA
A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A