Information for 21-CAAGCATGAC (Motif 34)

A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.017e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif66.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background80.8 +/- 116.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CAAGCATGAC-
GCAGCCAAGCGTGACN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------CAAGCATGAC-
NGCANTCATGCGTGACG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAAGCATGAC---
-GAGCGTGACCCC
A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGCATGAC
SCAGYCADGCATGAC
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CAAGCATGAC-
---NCGTGACN
A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------CAAGCATGAC-
TGCAGTCATGCGTGACG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGCATGAC
CAAGCTT---
A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAAGCATGAC
TCAGNGAGCGTGAC
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PAX6/MA0069.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAGCATGAC--
TTCACGCATGAGTT
A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

BACH2/MA1101.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGCATGAC---------
AAAGCATGACTCATCATTT
A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A T C G G T A C T C G A A G C T C A T G T G C A T A G C A C G T G T A C T C G A A G C T A T G C T C G A G C A T G C A T G A C T