Information for 24-ATGGCCATGGAT (Motif 24)

C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background174.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGGCCATGGAT
-TGACCTTGAN-
C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGGCCATGGAT
-TGACCTTGAV-
C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCCATGGAT
BNTGDCCTTG---
A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGGCCATGGAT
NTGACCTTGAN-
C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGGCCATGGAT
CGGTTGCTATGGCA
A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCCATGGAT-
NNNNATGACCTTGANTN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCCATGGAT--
GCTGACCTTGAACTN
A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGCCATGGAT---
-TTGCCATGGCAACN
C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGGCCATGGAT---
-TTGCCATGGCAACC
C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATGGCCATGGAT--
--GGCCATAAATCA
C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A