Information for 1-CAAGGTTGAT (Motif 1)

A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAAGGTTGAT
-AAGCTTG--
A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAGGTTGAT
GTCAAGGTCAC-
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAGGTTGAT---
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGTTGAT------
NNNNNATTGATGNGTGN
A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAGGTTGAT
TCAAGGTCAT-
A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAGGTTGAT
BTCAAGGTCA--
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAGGTTGAT-------
NNNNGTTGATTGGGTCG
A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAGGTTGAT
TCAAGGTCATA
A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAAGGTTGAT---
-ATGATKGATGRC
A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGGTTGAT
NTCAAGGTCA--
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C T G C G T A A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T