Information for 5-ATGCTGGTGA (Motif 13)

C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.009e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif31.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background77.4 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGCTGGTGA
TATGCGGGTA-
A C G T C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGCTGGTGA
CATGCGGGTAC
A C G T C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGGTGA--
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATGCTGGTGA-
NNGCAGGTGNN
C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGCTGGTGA-
NNGCAGGTGNN
C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

ZEB1/MA0103.3/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGCTGGTGA-
NNGCAGGTGNN
C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGCTGGTGA-
-NNCAGGTGNN
C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SNAI1/MA1558.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGCTGGTGA-
-GGCAGGTGCA
C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGCTGGTGA--
NNGGCAGGTGCNN
A C G T C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGCTGGTGA-
-RGCAGGTGYA
C G T A A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A