Information for 10-AGTGCCTTTC (Motif 19)

C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G A C T G A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.418e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif56.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background108.6 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCCTTTC
TTAAGTGCTT---
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCCTTTC---
NNGCACCTTTCTCC
A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTGCCTTTC--
AGAAATGACTTCCCT
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGCCTTTC
TTRAGTGSYK---
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCCTTTC
TTGAGTGSTT---
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCCTTTC
CTYRAGTGSY----
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTGCCTTTC---
-GTGACCTTGRVN
C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGCCTTTC
AATTTCAAGTGGCTTN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCCTTTC
CTTGAGTGGCT---
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGTGCCTTTC----
---TTCTTTCTCTT
C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T