| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 38.0 +/- 0.0bp |
| Average Position of motif in Background | 175.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0117.1_Nkx3-1/Jaspar
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAAAGGACTTAA--- TACTAAGTACTTAAATG |
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PH0112.1_Nkx2-3/Jaspar
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAAAGGACTTAA-- CNTTAAGTACTTAANG |
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|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAAAGGACTTAA --AAGCACTTAA |
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|
|
PH0116.1_Nkx2-9/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAAAGGACTTAA--- TTTTAAGTACTTAAATT |
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|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAAAGGACTTAA- ATAACCACTTAAA |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAAAGGACTTAA---- CATAACCACTTAACAAC |
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|
|
PB0166.1_Sox12_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------CAAAGGACTTAA AAACAGACAAAGGAAT--- |
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|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------CAAAGGACTTAA AGAAGAACAAAGGACTA-- |
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|
|
PB0061.1_Sox11_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------CAAAGGACTTAA ATAAGAACAAAGGACTA-- |
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|
|
ISL2/MA0914.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CAAAGGACTTAA ----GCACTTAA |
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