Information for 10-GGCTTTTATTAC (Motif 11)

A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGCTTTTATTAC
--NTTTTATGAC
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGCTTTTATTAC-
--NTTTTATTACN
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

HOXD9/MA0913.2/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGCTTTTATTAC
--NTTTTATTGC
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C
A C G T A C G T C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C

CDX4/MA1473.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGCTTTTATTAC-
--GTTTTATTGCC
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTTATTAC---
TNAATTTTATTACCTN
A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGCTTTTATTAC----
NAATTTTATTACCNNN
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGCTTTTATTAC---
GACTTTTAWTTTGAA
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGCTTTTATTAC----
NAATTTTATTACCTNN
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGCTTTTATTAC--
--NTTTCATTRCHD
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T
A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

CDX2/MA0465.2/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGCTTTTATTAC--
--NTTTTATTGCNN
A C T G A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T
A C G T A C G T C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T