Information for 3-AGGGAATTTTTG (Motif 3)

C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGGAATTTTTG-
-GGGAATTGTAGT
C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGGAATTTTTG
-GGGAATTTCC-
C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELB/MA1117.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGGAATTTTTG
NNGGGGAATNC---
A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGGAATTTTTG-
CCTTGCAATTTTTNN
A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGGAATTTTTG
NCTGGAATGC---
A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGGAATTTTTG
CCWGGAATGY---
A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGGAATTTTTG
-GGGAATTTCC-
C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGGAATTTTTG
NACAGGAAAT-----
A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGGAATTTTTG
GNNTGGAATGTGN-
A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGGGAATTTTTG
----AATTATT-
C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T