Information for 14-AAGCCATTAATC (Motif 19)

C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AAGCCATTAATC-
-RGCCATYAATCA
C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAGCCATTAATC-
-GGCCATAAATCA
C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AAGCCATTAATC-
---TCATCAATCA
C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGCCATTAATC---
ACAAGCAATTAATGAAT
A C G T A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGCCATTAATC---
ACAAGCAATTAATGAAT
A C G T A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAGCCATTAATC
-GGCCATTAAC-
C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGCCATTAATC
AAACMATTAN--
C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAGCCATTAATC---
ACAAGCAATTAAAGAAT
A C G T A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAGCCATTAATC---
ACAAGCAATTAAAGAAT
A C G T A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAGCCATTAATC-----
NAGCCATTAATTANTTA
C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A