Information for 11-CAGTCATCCAGG (Motif 10)

A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCATCCAGG--
SCAGYCADGCATGAC
A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGTCATCCAGG---
GCAGCCAAGCGTGACN
A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCATCCAGG--
NNCATTCATTCATNNN
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGTCATCCAGG
GATGAGTCATCC---
A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCATCCAGG
NTGAGTCATCN---
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T A C G T

JUN::JUNB/MA1132.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCATCCAGG
ATGAGTCATC----
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
C T G A C G A T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G T A C A C G T A C G T A C G T A C G T

FOS::JUND/MA1141.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGTCATCCAGG
GGATGAGTCATCG---
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGTCATCCAGG
GSCTGTCACTCA--
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGTCATCCAGG
TGGCAGNCTGCCAG-
A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCATCCAGG
NNATGAGTCATNN---
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A A C G T A C G T A C G T