Information for 11-CTCCAAATTTAG (Motif 13)

A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTCCAAATTTAG
--CCATATATGG
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCAAATTTAG-
-KCCAAAAATAGC
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCCAAATTTAG--
TTCCATATATGGAA
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAATTTAG--
TATCATAATTAAGGA
A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCAAATTTAG--
--CCATATATGGNA
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAAATTTAG---
NNNNTGAATTCANNNC
A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCCAAATTTAG-
-DCYAAAAATAGM
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCAAATTTAG
--CCAAAAATAG
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCCAAATTTAG-
-GCTAAAAATAGC
A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAATTTAG--
ATGCTAAAAATAGAA
A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A