Information for 7-CATACATGGG (Motif 16)

A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A C T G A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.447e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background108.4 +/- 89.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CATACATGGG--
TGACCATATATGGTCA
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CATACATGGG
CCATATATGG-
A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATACATGGG-
CCATATATGGNA
A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CATACATGGG-
TTCCATATATGGAA
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATACATGGG---
ACATTCATGACACG
A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CATACATGGG--
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

MXI1/MA1108.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATACATGGG
GACACATGGC
A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CATACATGGG
ATTTGCATACAATGG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CATACATGGG
NTTGATACATT--
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATACATGGG-----
TAAATACATGTAAAATT
A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T