Information for 13-GCTAATCCAG (Motif 31)

A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G C G T A A C G T A C G T C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.445e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background99.8 +/- 121.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCTAATCCAG
GCTAATCC--
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCTAATCCAG----
NNTAATCCNGNCNN
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GCTAATCCAG
-CTAATCCC-
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T

DPRX/MA1480.1/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCTAATCCAG
AGATAATCCC-
A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCTAATCCAG
NYTAATCCYB
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCTAATCCAG
CTTAATCCC-
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PITX2/MA1547.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCTAATCCAG
-ATAATCCC-
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCCAG--
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCTAATCCAG
GCTAATCCCC
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCTAATCCAG
-YTAATCCY-
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C C G T A A C T G
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T