Information for 8-ATATTTATATGG (Motif 9)

C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T C G T A A C G T
p-value:1e-4
log p-value:-9.944e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATATTTATATGG
ATATTTACATA-
C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATATTTATATGG
ATATTTACATA-
C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATATTTATATGG
TGTATATATATACC-
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATATTTATATGG-
NANTTATATATAANGN
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATATTTATATGG
-TGTTTATTT--
C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATATTTATATGG
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATATTTATATGG
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATATTTATATGG----
ANTAATTTTATGGCCGN
A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATATTTATATGG
NTGTTTAYATWW
C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATATTTATATGG
GAATATTCAT----
A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T