Information for 3-GGATACTTTCAT (Motif 5)

A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 0.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGATACTTTCAT
NTTGATACATT---
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGATACTTTCAT----
----ACTTTCGTTTCT
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GGATACTTTCAT----
------TTTCATTRCC
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGATACTTTCAT----
----ACTTTCACTTTC
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GGATACTTTCAT----
------TTTCATKGCC
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGATACTTTCAT-
---TGGTTTCAGT
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGATACTTTCAT--
---TCCTTTGATGT
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGATACTTTCAT------
----ACATTCATGACACG
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGATACTTTCAT-----
ATTTCCTTTGATCTATA
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGATACTTTCAT-----
AATCCCTTTGATCTATC
A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C