Information for 9-GAACAAGTCTAT (Motif 10)

A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGTCTAT
TTAAGAACAATAAATT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAACAAGTCTAT
--AAAAGTCAA-
A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGTCTAT
TTTAGAACAATAAAAT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGTCTAT
NNCNNAACAATTNT--
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGTCTAT-
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAAGTCTAT
NNTNANAACAATTNNA-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAACAAGTCTAT
NNNTAACAATTATAN
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

SOX12/MA1561.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAACAAGTCTAT
ACCGAACAATG----
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G A C G T A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAACAAGTCTAT
AAAACAGGTTTT-
A C G T A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAACAAGTCTAT
-AACAAT-----
A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T