Information for 21-AAGACGGGCAGC (Motif 20)

C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGACGGGCAGC
--TNNGGGCAG-
C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGACGGGCAGC
--NGTGGGCAT-
C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGACGGGCAGC
CCAGACRSVB---
A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

E2F6/MA0471.2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGACGGGCAGC
GGGGGCGGGAAGG
A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAGACGGGCAGC----
--GCCGCGCAGTGCGT
C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ETS2/MA1484.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGACGGGCAGC
--GACCGGAAGT
C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
A C G T A C G T C T A G C T G A T A G C G T A C C T A G T A C G T G C A G C T A C T A G A G C T

HIF1A/MA1106.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGACGGGCAGC
-GTACGTGCCC-
C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGACGGGCAGC---
NNNNTTGGGCACNNCN
A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AAGACGGGCAGC-
--------CAGCC
C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0108.1_Atf1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAGACGGGCAGC
GAATGACGAATAAC
A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C T G A G T C C G T A A C T G A G T C
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C