Information for 3-TCGGCCGGATCG (Motif 5)

A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A G T C A G T C A C T G A C T G A G T C A G T C A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCGGCCGGATCG-----
TTTCGAGCGGAACGGTCGC
A C G T A C G T A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCGGCCGGATCG
BTKGGCGGGAAA-
A C G T A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCGGCCGGATCG
--GGCGGGAARN
A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

TFDP1/MA1122.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCGGCCGGATCG
-GGGCGGGAAGG
A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
A C G T T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G

E2F6/MA0471.2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCGGCCGGATCG
GGGGGCGGGAAGG
A C G T A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCGGCCGGATCG
-GGGCGGGACC-
A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TCGGCCGGATCG
-----CGGAGC-
A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCGGCCGGATCG--
NNNTNGGGCGTATNNTN
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCGGCCGGATCG-
---RCCGGAARYN
A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G A C G T
A C G T A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCGGCCGGATCG-
--ACCCGGATGTA
A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C T G C G T A A C G T A G T C A C T G A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A