Information for 1-TTAGTTGAGGCC (Motif 1)

A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background121.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TTAGTTGAGGCC---
-------AGGCCTNG
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTAGTTGAGGCC
ACTAGTTAAC---
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTAGTTGAGGCC-
---HAWGRGGCCM
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTAGTTGAGGCC-
-----CTAGGCCT
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTAGTTGAGGCC--------
------CAGGCCNNGGCCNN
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTAGTTGAGGCC-
GGTCANYTGAGGWCA
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Plagl1/MA1615.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTAGTTGAGGCC---
--CCCTGGGGCCAGG
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTGAGGCC
NNCAGTTGNN---
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T A C G T

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTAGTTGAGGCC-
GGTCACCTGAGGTCA
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T
C A T G A C T G A G C T A T G C C G T A A T G C G T A C G A C T T A C G C T G A A C T G A C T G G C A T A T G C C T G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTAGTTGAGGCC-----
NNANTTGACCCCTNNNN
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G