Information for 3-ACAAGGCCGG (Motif 3)

C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR5A1/MA1540.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACAAGGCCGG
GTCAAGGTCAC
A C G T C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAAGGCCGG
-CTAGGCCT-
C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACAAGGCCGG-
-CAAGGHCANV
C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAAGGCCGG
NTCAAGGTCA-
A C G T C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACAAGGCCGG-
AAGTTCAAGGTCAGC
A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACAAGGCCGG----
ACATGCCCGGGCAT
C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACAAGGCCGG
BTCAAGGTCA-
A C G T C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGGCCGG
VRRACAAWGG---
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACAAGGCCGG
-CNAGGCCT-
C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACAAGGCCGG------
--CAGGCCNNGGCCNN
C G T A A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C