Information for 9-ATCATCAACC (Motif 26)

C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C T G C G T A A C G T A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.330e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background136.4 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATCATCAACC---
GTCATCAATCATT
C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATCATCAACC---
TNAGNTGATCAACCGGT
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATCATCAACC-
-TCATCAATCA
C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATCATCAACC---
-CCATCAATCAAA
C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATCATCAACC-
-YCATCMATCA
C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T
A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCATCAACC-----
GAAGATCAATCACTTA
A C G T C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCAACC
TAGTGATCATCATTA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCATCAACC--
GYCATCMATCAT
C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATCATCAACC
GTTAATNATTAAC-
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATCATCAACC
AGTTAATGATTAACT
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C C G T A C G T A A G T C A G T C
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T