Information for 11-AGTTTAAGGG (Motif 26)

C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.390e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif29.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background86.1 +/- 86.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTAAGGG--
GACNGTTTAACGGTT
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTTTAAGGG--
AGGTCAAGGTCA
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTTTAAGGG--
AGGTCAAGGTCA
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGTTTAAGGG-
---CTAATKGV
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Nkx3-2/MA0122.3/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTTTAAGGG-----
--NTTAAGTGGTTNN
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTAAGGG-----
AAATTCAAGTGGNTTN
A C G T C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

NR6A1/MA1541.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGTTTAAGGG---
GTCAAGTTCAAGGTCAA
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTTTAAGGG--
--TTTAATTGCN
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGTTTAAGGG--
---TTAAGTGGT
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTTTAAGGG-
-TTTTATKRGG
C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G