Information for 4-CACAACTATTGA (Motif 4)

A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background166.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACAACTATTGA-----
NAAANTTATTGAANCAN
A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CACAACTATTGA--
------TATTGAYY
A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACAACTATTGA---
ATAAACAATTAAACA
A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACAACTATTGA-
NNTNANAACAATTNNA
A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACAACTATTGA
---AATTATT--
A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACAACTATTGA
AACAGCTGTT--
A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T

SCRT1/MA0743.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACAACTATTGA---
NNCCACCTGTTGAANN
A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C G T A T C G A G T A C G T A C C T G A G A T C G A T C C G A T T A C G G A C T C A G T C T A G T G C A G C T A G A C T G C A T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CACAACTATTGA
NNNTAACAATTATAN-
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACAACTATTGA------
--NNTTTATTGATTTTTT
A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACAACTATTGA---
TNNAGAACAATANATNN
A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C