Information for 2-GGTAGATCAC (Motif 23)

A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.777e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background97.2 +/- 80.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTAGATCAC----
ACCGGTTGATCACCTGA
A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGTAGATCAC
--AAGGTCAC
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGTAGATCAC-
---AGATAASR
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTAGATCAC---
---AGATAAGANN
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGATCAC
NCYATMAATCAY
A C G T A C G T A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T

GFI1/MA0038.2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGTAGATCAC----
--CAAATCACTGCA
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

GATA3/MA0037.3/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTAGATCAC-
---AGATAAGA
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGTAGATCAC
TATAAGTAGGTCAA
A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

GATA5/MA0766.2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGTAGATCAC--
--CAGATAAGGA
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A T G C G C T A A C T G C G T A A C G T C G T A C G T A A T C G T C A G T G C A

GATA1/MA0035.4/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGTAGATCAC--
-NNAGATTAGAN
A C T G A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A C G T
A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A