Information for 2-GTATATTTTGGT (Motif 4)

A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTATATTTTGGT---
NNCTTTGTTTTGNTNNN
A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTATATTTTGGT-
NNTGTTTATTTTGGCA
A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTATATTTTGGT-
-KCTATTTTTRGH
A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTATATTTTGGT---
TTCTATTTTTAGNNN
A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTATATTTTGGT-
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTATATTTTGGT-
-GCTATTTTTGGM
A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PHOX2B/MA0681.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTATATTTTGGT----
NNATAATTTGATTANN
A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTATATTTTGGT
TGTTTAYTTAGC-
A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTATATTTTGGT---
-TATAAGTAGGTCAA
A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

ZNF384/MA1125.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTATATTTTGGT-
-TTTTTTTTTANN
A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A