Information for 1-GCCTAAAATGTC (Motif 1)

A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCTAAAATGTC---
---TTAAAGGTCAAA
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCTAAAATGTC
ARGAGGMCAAAATGW-
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTAAAATGTC-
NNCTGGAATGTNN
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G

ZFP42/MA1651.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCTAAAATGTC--------
GTTCCAAAATGGCTGCCTCCG
A C G T A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCTAAAATGTC-----
-TCTCAAAGGTCACGAG
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCTAAAATGTC
KCCAAAAATAGC
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCTAAAATGTC-----
-TCTCAAAGGTCACCTG
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCTAAAATGTC-
-ANGNAAAGGTCA
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCTAAAATGTC---
---CAAGATGGCGGC
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCTAAAATGTC
GCTAAAAATAGC
A C T G A G T C A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C