Information for 5-CACTGAGATTGT (Motif 8)

A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox11/MA0869.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CACTGAGATTGT-
AACACTGAAATTGTT
A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CACTGAGATTGT-
AACAATGNTATTGTT
A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACTGAGATTGT-
AACACTACCATTGTT
A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACTGAGATTGT
-GCAGTGATTT-
A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACTGAGATTGT
TGCTGTGATTT-
A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CACTGAGATTGT-
-------ATTGTT
A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CACTGAGATTGT--
-------ATTGTTA
A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CACTGAGATTGT----
-------ATTGTTTAN
A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTGAGATTGT-
NNNACCGAGAGTNNN
A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACTGAGATTGT-
GNNACCGAGAATNNN
A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T