Information for 1-GGGCAATCTC (Motif 1)

A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C G T A C G T A C T G A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATCTC
NNGGGGAATNC-
A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGCAATCTC-
GGGGGAATCCCC
A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAATCTC
TNNGGGCAG----
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGCAATCTC
AGATGCAATCCC
A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGCAATCTC--
AGGGGAATCCCCT
A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAATCTC--
AGGGGAATCCCCT
A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAATCTC
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAATCTC
NGTGGGCAT----
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGGCAATCTC---
---AAATCACTGC
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGCAATCTC-
-GGGAATTTCC
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C