Information for 1-AGGGCAGACC (Motif 8)

C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C G T A C T G A G T C A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.671e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background110.1 +/- 84.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGACC
TNNGGGCAG---
A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGCAGACC-
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGGGCAGACC---
---CCAGACRSVB
C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGGCAGACC
ATGCCAGACN
C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGGGCAGACC---
---GCGGACCBWA
C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAGACC
CAAAGGTCAG---
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGGGCAGACC-
---CCAGACAG
C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAGACC
TRAGGTCA----
A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGCAGACC
NBYCAAGGTCAC---
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAGACC
CAAAGGTCAAA--
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G C G T A A G T C A G T C
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T