Information for 6-GGGTAGCTCTAA (Motif 7)

A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGCTCTAA-
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGCTCTAA-
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GGGTAGCTCTAA
GCTGGGGGGTACCCCTT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGGTAGCTCTAA
ATTTACAGTAGCAAAA-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGCTCTAA-
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGCTCTAA-
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGGTAGCTCTAA
ATGTACAGTAGCAAAG-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGGTAGCTCTAA-----
--AGNGTTCTAATGANN
A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

OSR1/MA1542.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAGCTCTAA
NACAGTAGCN----
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGCTCTAA-
AATAGGGTATCAATTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T