Information for 3-GACATCGTAA (Motif 10)

A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-9.171e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background123.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9/MA0594.2/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GACATCGTAA---
---GTCGTAAACG
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

HOXD11/MA0908.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GACATCGTAA---
---GTCGTAAAAA
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXB9/MA1503.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GACATCGTAA---
---GTCGTAAAAT
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T

HOXC9/MA0485.2/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GACATCGTAA---
---GTCGTAAAAT
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACATCGTAA---
--AGTCGTAAAAA
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACATCGTAA------
CAAGGTCGTAAAATCTT
A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GACATCGTAA---
--GGTCGTAAAAT
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GACATCGTAA---
---GTCGTAAAAT
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GACATCGTAA----
--GGTCGTAAAATT
A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

CREB1/MA0018.4/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GACATCGTAA
NATGACATCANNN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A C G T C G T A C G T A
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A