Information for 3-TGACATTACG (Motif 8)

A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A C G T A A C G T A C T G A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.884e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background169.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.4/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGACATTACG-
NATGACATCANNN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G A C G T
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACATTACG
TTGACAG----
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGACATTACG
-GCAATTAC-
A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGACATTACG
ARNTGACA-----
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGACATTACG
-GCAATTAC-
A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGACATTACG
NNTGACCTTTN-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T

HOXA7/MA1498.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGACATTACG
-GCAATTAC-
A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGACATTACG-
GTGACGTCACCG
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACATTACG
TTGACAGG---
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACATTACG
YTGWCADY---
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A G T C A C T G
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T