Information for 5-GGTTAGAGAC (Motif 23)

A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C A C G T C G T A C G T A A G T C A G T C
p-value:1e-3
log p-value:-7.668e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background124.9 +/- 77.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGTTAGAGAC--
GGTTAGAGACCT
A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTTAGAGAC--
AGGTGNCAGACAG
A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTTAGAGAC-
AGGTGHCAGACA
A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGAGAC-----
CTACTTGGATACGGAAT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTTAGAGAC--
RGTTAGTGCCCY
A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGAGAC---
AAGGTCANTGACCTT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGAGAC---
AAGGTCANTGACCTT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C T C G A T A C G G A C T T C A G T G C A G T A C G T A C A G C T G A C T

ZBTB12/MA1649.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTTAGAGAC
NNGTTCCAGNN
A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGTTAGAGAC--
BCNGGTTCTAGANCN
A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGAGAC
CAGGTAAGTAT-
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T