Information for 2-CWGTCACGGCAW (Motif 2)

A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T
Reverse Opposite:
C G T A A C G T A C T G A T G C G T A C A C T G A C G T A C T G C G T A T G A C C G T A A T C G
p-value:1e-6
log p-value:-1.524e+01
Information Content per bp:1.690
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif57.14%
Number of Background Sequences with motif1011.8
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets99.2 +/- 72.1bp
Average Position of motif in Background100.4 +/- 87.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB3/MA0638.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CWGTCACGGCAW--
GTGCCACGTCATCA
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

ATF6/MA1466.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CWGTCACGGCAW--
NTGCCACGTCATCA
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T A C G T A C G T
T A G C G A C T C A T G G T A C G A T C C T G A A G T C C T A G G A C T G T A C C T G A A G C T T G A C T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CWGTCACGGCAW----
AATCGCACTGCATTCCG
A C G T A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CWGTCACGGCAW
-----ACGTCA-
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CWGTCACGGCAW
-TBGCACGCAA-
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CWGTCACGGCAW
-AGTCACGC---
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CWGTCACGGCAW-----
-ATTTACGACAAATAGC
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

XBP1/MA0844.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CWGTCACGGCAW-
AATGCCACGTCATC
A C G T A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CWGTCACGGCAW
CNGTCACGCCAC
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CWGTCACGGCAW
--ATCACCCCAT
A T G C C G A T A C T G G A C T T A G C C G T A A G T C A C T G A T C G G T A C G T C A C G A T
A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T