Information for 1-CCATATCGCACA (Motif 1)

A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.058e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCATATCGCACA
CACCATATGGCG--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCATATCGCACA-
GCGGCGATATCGCAGCG
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

NEUROD2/MA0668.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCATATCGCACA
ACCATATGGC---
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCATATCGCACA-
---TTTCCCACAN
A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

CEBPA/MA0102.4/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCATATCGCACA----
--TTATTGCACAATAT
A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T T C G A G C A T C A G T C A T G G A T C C T G A G A T C G T C A C G T A A G C T G C T A G C A T

CEBPD/MA0836.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCATATCGCACA----
---TATTGCACAATAT
A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCATATCGCACA
ACCATATGGT---
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCATATCGCACA
ACCATATGTT---
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCATATCGCACA
AACATATGTT---
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCATATCGCACA
NNACATATGGCN--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A G T C C G T A A G T C C G T A
A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G A C G T A C G T