Information for 2-TCAATGATAATA (Motif 4)

A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background122.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0064.1_Sox14_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCAATGATAATA---
GCTAATTATAATTATC
A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCAATGATAATA---
TATAATTATAATATTC
A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TCAATGATAATA---
NNTAATTATAATNANN
A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

GATA3/MA0037.3/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCAATGATAATA
----AGATAAGA
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAATGATAATA---
TAAGATTATAATACGG
A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PH0017.1_Cux1_2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAATGATAATA----
-TAATGATGATCACTA
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCAATGATAATA--
----AGATAAGANN
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAATGATAATA----
TAAACTGATAAGAAGAT
A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAATGATAATA--
--TATGCWAATBAV
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

GATA5/MA0766.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAATGATAATA-
---CAGATAAGGA
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A T G C G C T A A C T G C G T A A C G T C G T A C G T A A T C G T C A G T G C A