Information for 2-CAAACGGGGC (Motif 25)

A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-8.777e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background98.7 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAAACGGGGC--
--HAWGRGGCCM
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

KLF13/MA0657.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAAACGGGGC-------
CAAAAAGGGGCGTGGCAT
A C G T A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAACGGGGC-
-WDNCTGGGCA
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAAACGGGGC
-ACACGTGGC
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

CTCFL/MA1102.2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAACGGGGC--
AGCAGGGGGCGC
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C A C G T A C G T
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAAACGGGGC------
NNNAAGGGGGCGGGNNN
A C G T A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAAACGGGGC
----CGGAGC
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PLAGL2/MA1548.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAACGGGGC---
---NGGGGGCCCN
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAAACGGGGC
CCAGACRSVB-
A C G T A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAAACGGGGC
NHAACBGYYV
A G T C C G T A C G T A C G T A A G T C A C T G A C T G A C T G A C T G A G T C
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A