Information for 5-AATTACATATGC (Motif 7)

C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:AATTACATATGC
----ACATATGG
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AATTACATATGC-
---NACATATGGN
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

POU4F2/MA0683.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATTACATATGC--
CTCATTAATTATGCAT
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AATTACATATGC-
---AACATATGTT
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

NEUROG1/MA0623.2/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AATTACATATGC-
---GACATATGTC
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C

NEUROG2/MA0669.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AATTACATATGC-
---AACATATGTC
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AATTACATATGC-
---ACCATATGTT
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

NFIL3/MA0025.2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATTACATATGC
NNATTGCATAANN
A C G T C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

PH0061.1_Hoxb6/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AATTACATATGC
NNNGTAATTACNNATA-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATTACATATGC
ATTTGCATAT--
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T