Information for 21-CTACCAGACTAA (Motif 20)

A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.043e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTACCAGACTAA
---BCAGACWA-
A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTACCAGACTAA
ATGCCAGACN--
A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTACCAGACTAA
---CCAGACAG-
A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTACCAGACTAA-
---CCAGACRSVB
A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTACCAGACTAA
ACATGCTACCTAATAC-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTACCAGACTAA
--TCTAGACA--
A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTACCAGACTAA---
CAAATCCAGACATCACA
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTACCAGACTAA
AGGTGHCAGACA--
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTACCAGACTAA
ACTTGCTACCTACACC-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTACCAGACTAA--
TACTCCAGAAAAGAT
A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T