Information for 18-CCCCTAATTCAA (Motif 23)

A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C T G A C T G A C T G
p-value:1e-3
log p-value:-8.179e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background102.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARGFX/MA1463.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCCCTAATTCAA
--TCTAATTAAA
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A
A C G T A C G T C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A

TLX2/MA1577.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCCTAATTCAA
---CTAATTAN-
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCCTAATTCAA-----
-AATCAATTCAATAATT
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCCTAATTCAA-
--NCTAATTAANN
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C G T
A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCCCTAATTCAA
---CTAATTAG-
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCCCTAATTCAA----
----TAATTNAATTAA
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

DRGX/MA1481.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCCTAATTCAA
---NTAATTAG-
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A T C G G A C T T C G A C G T A A C G T A G C T T C G A T C A G A C G T

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCCTAATTCAA
---CTAATTAA-
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

LMX1B/MA0703.2/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCCTAATTCAA--
---TTAATTAAANT
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCCCTAATTCAA--
-----NATTCAAAT
A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T