Information for 9-GCAATATTTAGC (Motif 10)

A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCAATATTTAGC
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCAATATTTAGC
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCAATATTTAGC
GCTATTTTTAGC
A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCAATATTTAGC
GCTATTTATAGC
A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCAATATTTAGC
TCTATTTATAGN
A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCAATATTTAGC
CCTTGCAATTTTTNN-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAATATTTAGC
-CCATATATGG-
A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAATATTTAGC-
NNTCTATTTTTAGNN
A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PH0156.1_Rax/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAATATTTAGC----
TGCACTAATTAGCGCAC
A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T T A C G A G T C T C G A A G T C G A C T T C G A C T G A A G C T A C G T C T G A T C A G A G T C A T C G T A G C T G C A G A T C

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAATATTTAGC---
TCGCGATAATTACCGAC
A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C