Information for 19-GCTCCACTCACT (Motif 19)

A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCTCCACTCACT
-GTACACTCAC-
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCTCCACTCACT
GCTCCGCCCMCY
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTCCACTCACT--
TAACCACTCAAGAA
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTCCACTCACT
-ATCCAC-----
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTCCACTCACT-
--ACCACTCAAAA
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTCCACTCACT
-MRSCACTYAA-
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTCCACTCACT-
NRGCCCCRCCCHBNN
A C G T A C G T A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTCCACTCACT
GCTCCG------
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTCCACTCACT
GCCACRCCCACY
A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

KLF4/MA0039.4/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCCACTCACT
CGCCCCACCCCC-
A C G T A C T G A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C A C G T