Information for 4-TGAGGTCTCTCA (Motif 5)

A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.037e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGAGGTCTCTCA--
--AGGTCTCTAACC
A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF274/MA1592.1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGAGGTCTCTCA
GGTATGAGTTCTCGCT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGTCTCTCA
NNTTGAGGTTNN---
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGAGGTCTCTCA---
---TGTCTGDCACCT
A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ATF2/MA1632.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGAGGTCTCTCA
AAATGAGGTCATT--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T A C G T A C G T

CREM/MA0609.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGAGGTCTCTCA
GCAGTGACGTCACTGC
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
T A C G T G A C C T G A T C A G G A C T A T C G C T G A A G T C T C A G G A C T T A G C C T G A A G T C G A C T A C T G A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGAGGTCTCTCA---
--CTGTCTGTCACCT
A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PKNOX1/MA0782.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGTCTCTCA--
NNGCTGTCACTCANN
A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAGGTCTCTCA
TRAGGTCA----
A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGGTCTCTCA
TGACAGCTGTCA
A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A