Information for 1-GAAGTAGATGAC (Motif 3)

A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background167.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRA::VDR/MA0074.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTAGATGAC--
TGAACCCGATGACCC
A C G T A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAGTAGATGAC
AGGAAACAGCTG--
A C G T A C G T A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGTAGATGAC-
-AAAATGCTGACT
A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C A C G T
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGTAGATGAC
WAABTAGGTCAV
A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAAGTAGATGAC
--ACCAGATGGC
A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAAGTAGATGAC-
-----AGATAASR
A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAGTAGATGAC---
AAGGTCATTGACCTT
A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A C T G A A C T G C T A G A C G T A G T C T C G A A C G T A G C T T C A G G T C A A G T C T G A C G A C T G A C T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGTAGATGAC---
-AAGGTCATGACCTT
A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

ELF3/MA0640.2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGTAGATGAC
ANCAGGAAGTGGNN---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C
C G T A T A G C T A G C T G C A T C A G C T A G T G C A C T G A T C A G G C A T C T A G T C A G T C G A C T G A A C G T A C G T A C G T

ETV5/MA0765.2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAAGTAGATGAC
NCCGGAAGTNN-----
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C
T C A G T A G C T G A C T A C G T A C G T C G A C T G A T A C G A G C T T A C G T A C G A C G T A C G T A C G T A C G T A C G T