Information for 2-CAGCCTCCACGA (Motif 3)

A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAGCCTCCACGA
----ATCCAC--
A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTCCACGA---
AGACCCCCCACGAAGC
A C G T A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

GLIS3/MA0737.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGCCTCCACGA--
GACCCCCCACGAAG
A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGCCTCCACGA
CAACGTCCGCGG
A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Znf281/MA1630.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGCCTCCACGA--
---CCTCCCCCACC
A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C

ZNF460/MA1596.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGCCTCCACGA
GCCTCAGCCTCCCGAG
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
T C A G A T G C A T G C A G C T A T G C T G C A C T A G A G T C A T G C C A G T A T G C A T G C A G T C T C A G T C G A T C A G

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTCCACGA
AGCAACAGCCGCACC--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGCCTCCACGA
CAGCC-------
A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTCCACGA
BCAGACWA-----
A C G T A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCCTCCACGA--
GACCCCCCGCGAAG
A G T C C G T A A C T G A G T C A G T C A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G