Information for 14-GCAAGCAGAC (Motif 28)

A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.427e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background125.9 +/- 78.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GCAAGCAGAC----
----CCAGACRSVB
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCAAGCAGAC--
----CCAGACAG
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCAAGCAGAC--
----BCAGACWA
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF317/MA1593.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCAGAC-
TAACAGCAGACT
A C G T A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAAGCAGAC
GTAAACAG--
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAAGCAGAC
TBGCACGCAA--
A C G T A C G T A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCAGAC------
CAAATCCAGACATCACA
A C G T A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAAGCAGAC
CCAATCAA--
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAAGCAGAC
GTAAACA---
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAAGCAGAC
-CACGCA---
A C T G A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T