Information for 1-CAATACCACAGT (Motif 1)

A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAATACCACAGT-
-NWAACCACADNN
A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAATACCACAGT-
--AAACCACAGAN
A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAATACCACAGT
-NAAACCACAG-
A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAATACCACAGT
--AAACCACAGC
A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Sox1/MA0870.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAATACCACAGT-
AACAATAACATTGTT
A C G T A C G T A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAATACCACAGT
--AAACCACANN
A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAATACCACAGT-
AADGAGVCANYASTACAGNC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAATACCACAGT-
CATACAATACGAAATAA
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

HOXD13/MA0909.2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAATACCACAGT
CCCAATAAAAC---
A C G T A C G T A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAATACCACAGT
--AAACCGCAA-
A G T C C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T