Information for 4-CTTTATATAAGT (Motif 4)

A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background127.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTTTATATAAGT-
TCTTTATATATAAATA
A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTATATAAGT
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTATATAAGT
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTTATATAAGT
-RTTATGYAAB-
A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTTTATATAAGT
ANTCCTTTGTCTNNNN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTTATATAAGT
--TTTTATKRGG
A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTATATAAGT----
-VTTACGTAAYNNNNN
A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T A C G T C T G A G A T C T C A G G A C T G T C A C G T A A G C T G T C A C T A G A G C T A C G T T C G A

DBP/MA0639.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTATATAAGT
NGTTACGTAATN
A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

NFIL3/MA0025.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTTATATAAGT
NNATTGCATAANN
A C G T A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTTATATAAGT
NTGTTTAYATWW--
A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T