| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 88.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
DMRT3/MA0610.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA-- ---AATGTATCAAT |
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|
PH0161.1_Six1/Jaspar
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA----- GATGGGGTATCATTTTT |
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|
|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GAATAAGTATCA- ATGAATATTCATGAG |
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|
|
MF0010.1_Homeobox_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA -AATAATT---- |
|
|
|
PH0166.1_Six6_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA----- AATAGGGTATCAATATT |
|
|
|
PB0155.1_Osr2_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GAATAAGTATCA--- NNTGTAGGTAGCANNT |
|
|
|
Six3/MA0631.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA----- GATAGGGTATCACTAAT |
|
|
|
PH0163.1_Six3/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA----- GATAGGGTATCACTAAT |
|
|
|
PB0059.1_Six6_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA----- AATAGGGTATCATATAT |
|
|
|
PB0105.1_Arid3a_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GAATAAGTATCA----- --ACCCGTATCAAATTT |
|
|
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