Information for 8-GCCAAATGTC (Motif 15)

A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif24.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background116.6 +/- 77.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSGN1/MA1524.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCCAAATGTC-
CGCCATATGTCC
A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C

TWIST1/MA1123.2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCAAATGTC-
ATTCCAGATGTTT
A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCCAAATGTC
ACCATATGTT
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCCAAATGTC
-CCATATGT-
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCAAATGTC
GACATATGTT
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

NEUROG1/MA0623.2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCCAAATGTC
GACATATGTC
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATGTC----
AAGGCCAGATGGTCCGG
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NEUROD2/MA0668.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCAAATGTC
GCCATATGGT
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCCAAATGTC
DMCAGATGKS
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATGTC
CGTGCCAAG----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T