| p-value: | 1e-3 |
| log p-value: | -8.775e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 7.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 133.0 +/- 0.0bp |
| Average Position of motif in Background | 61.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 1 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CGTCTAAGAG- ---CTAATKGV |
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TCF7/MA0769.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CGTCTAAGAG ANATCAAAGNN |
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Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 3 |
| Score: | 0.56 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CGTCTAAGAG----- --NTTAAGTGGTTNN |
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Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.56 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | CGTCTAAGAG-- ---TTAAGTGGT |
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ZSCAN29/MA1602.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CGTCTAAGAG-- CGTCTACACGGG |
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TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CGTCTAAGAG- GNCTATAAAAGG |
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ISL2/MA0914.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.54 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | CGTCTAAGAG- ---TTAAGTGC |
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STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer
| Match Rank: | 8 |
| Score: | 0.54 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CGTCTAAGAG-- TTTCTNAGAAAN |
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PH0048.1_Hoxa13/Jaspar
| Match Rank: | 9 |
| Score: | 0.53 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CGTCTAAGAG---- ANATTTTACGAGNNNN |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CGTCTAAGAG VBSYGTCTGG--- |
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