Information for 7-GCTCTGATCAAA (Motif 9)

A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCTCTGATCAAA------
-NANAGATCAAAGGGNNN
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTCTGATCAAA------
-NNNAGATCAAAGGANNN
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTCTGATCAAA------
-TATAGATCAAAGGAAAA
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

TCF7/MA0769.2/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCTCTGATCAAA---
----ANATCAAAGNN
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GCTCTGATCAAA
------ATTAAA
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCTCTGATCAAA------
-TATAGATCAAAGGAAAA
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCTCTGATCAAA--
----ASATCAAAGG
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTCTGATCAAA-
---ATGATGCAAT
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTCTGATCAAA
ATGATCGAATCAAA
A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTCTGATCAAA
--NCYAATAAAA
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C C G T A C G T A C G T A
A C G T A C G T C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A