Information for 5-TAGGAGCG (Motif 21)

A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C A G T C A C G T C G T A
p-value:1e-2
log p-value:-5.732e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif302.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background96.2 +/- 69.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TAGGAGCG
-CGGAGC-
A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAGGAGCG
---CAGCC
A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGCG-----
NNTNAGGGGCGGNNNN
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGCG------
NNTNNGGGGCGGNGNGN
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

RFX7/MA1554.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGGAGCG
NTAGCAACG
A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGGAGCG
NTTTTACGAGN-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TAGGAGCG---
TGCGCATAGGGGAGGAG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

MAZ/MA1522.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGGAGCG---
GGGGAGGGGNN
A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TAGGAGCG--
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGCG----
ATAAAGGCGCGCGAT
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T