| p-value: | 1e-2 |
| log p-value: | -5.647e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 329.8 |
| Percentage of Background Sequences with motif | 0.35% |
| Average Position of motif in Targets | 48.0 +/- 0.0bp |
| Average Position of motif in Background | 92.0 +/- 71.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
DMRT3/MA0610.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.84 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GATGTATC--- AATGTATCAAT |
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DMRTC2/MA1479.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GATGTATC---- AATGTATCAATT |
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DMRTA2/MA1478.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GATGTATC---- AATGTAACAATT |
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PB0163.1_Six6_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GATGTATC----- ATGGGATATATCCGCCT |
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MEIS2(var.2)/MA1640.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GATGTATC--- AAATGATTTATGGCT |
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|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GATGTATC- TGATKGATGR |
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|
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PBX2/MA1113.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GATGTATC-- NNTGATTTATGNN |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GATGTATC-- ATGATKGATGRC |
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|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -8 |
| Orientation: | reverse strand |
| Alignment: | --------GATGTATC- NNNNNATTGATGNGTGN |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GATGTATC--- TGATTTATGGCC |
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