Information for 13-ATATAATTCA (Motif 21)

C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.678e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background128.1 +/- 61.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATATAATTCA
ATGCATAATTCA
A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATATAATTCA--
GTCATAAATCATT
A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATATAATTCA-
NCYATMAATCAY
A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATATAATTCA------
AATCAATTCAATAATT
C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATATAATTCA---
NNCCATAAATCATNN
A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATATAATTCA
-AATAATT--
C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATATAATTCA----
ANNATTTAATTAATTNN
A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATATAATTCA-
NANTATTATAATTNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

DRGX/MA1481.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATATAATTCA
--NTAATTAG
C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A
A C G T A C G T A T C G G A C T T C G A C G T A A C G T A G C T T C G A T C A G

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATATAATTCA---
TATCATAATTAAGGA
A C G T A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A