Information for 18-AATTATTTGTCC (Motif 18)

C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AATTATTTGTCC
AATTATT-----
C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AATTATTTGTCC
GNATTAATTAGTTNNC-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AATTATTTGTCC
CNNAGTAATTAATTNNC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATTATTTGTCC----
ANTCCTTTGTCTNNNN
C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AATTATTTGTCC
CNNANTAATTAATTNNC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C A C G T

PH0106.1_Msx1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AATTATTTGTCC
NNATTAATTAGTNGNN-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AATTATTTGTCC
AAATTAATTAATC
A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AATTATTTGTCC
TGATTAATTAATTGAC-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AATTATTTGTCC
NNNGGTAATTATNGNGN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A A C G T

PH0008.1_Barx2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTATTTGTCC
TAAGTAATTAGTTATA-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A A C G T