Information for 9-GAGTTGCCCC (Motif 27)

A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.487e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background115.3 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGTTGCCCC----
-NNTGGCCCCAGNN
A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGCCCC------
NNANTTGACCCCTNNNN
A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGTTGCCCC-----
GGGTGTGCCCAAAAGG
A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZFP57/MA1583.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTTGCCCC---
GCATTGCCGCAGT
A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTTGCCCC-------
AAATTCCCCCCGGAAGT
A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGTTGCCCC---
---KGGCCYCWTD
A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGTTGCCCC--
---CTGCCCGCA
A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAGTTGCCCC--
---ATGCCCACC
A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGTTGCCCC
GGGAATTTCC--
A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGCCCC
NNCAGTTGNN--
A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T