Information for 20-GAGAGCTCTTGT (Motif 19)

A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF274/MA1592.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGCTCTTGT-
NNCGAGAACTCATACN
A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAGCTCTTGT
GACAGCTGTT--
A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T
C T A G C T G A A G T C C G T A A C T G G T A C C G A T A C T G A G C T A G C T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGAGCTCTTGT
GCAACAGCTGTTGT
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGAGCTCTTGT------
--GAGCCCTTGTCCCTAA
A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

MSC/MA0665.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGAGCTCTTGT
AACAGCTGTT--
A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGAGCTCTTGT---
-----CTATTGTTTT
A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGAGCTCTTGT-
CTGCCWVCTTTTRTA
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T
A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGCTCTTGT--
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGAGCTCTTGT----
----BCCWTTGTBYKV
A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGCTCTTGT
TTGAGTGSTT----
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T