Information for 7-TGTGTGTACTTC (Motif 8)

A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background159.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA2/MA0047.3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTACTTC
NNTGTTTACAT-
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
G C A T C G T A C G A T T C A G C G A T C A G T C A G T C G T A G A T C G C T A G A C T A C G T

FOXP1/MA0481.3/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTACTTC
NNTGTTTACNN-
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
C G A T C G T A C G A T T C A G C G A T C A G T C A G T G C T A G A T C G C T A G C A T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTACTTC
TNTGTTTACTT-
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T

FOXK2/MA1103.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTACTTC
NNTGTTTACNN-
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
A G T C G C A T C G A T C T A G G A C T C A G T C G A T G C T A G A T C G C T A G C A T A C G T

FOXA3/MA1683.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTACTTC
NNTGTTTACNN-
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
G C A T G C T A C G A T T C A G C G A T C A G T C A G T C T G A G A T C G C T A G A C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTACTTC--
NTNTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTACTTC--
NNGTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTACTTC-
NNGCGTGTGTGCNGCN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTGTGTACTTC
--TGTTTACTTT
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxf1/MA1606.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTACTTC
NNTGTTTACAN-
A C G T A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A G T C
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T A C G T