Homer de novo Motif Results (motif_results/SRR11563610_amplicon40_ecDNA_1//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2
Total background sequences = 53000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A 1e-9-2.283e+01100.00%0.00%0.0bp (0.0bp)PB0118.1_Esrra_2/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
2 * A C T G A C T G A G T C A C T G A G T C A C G T A C T G C G T A C G T A A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0112.1_E2F2_2/Jaspar(0.644)
More Information | Similar Motifs Found
motif file (matrix)
3 * A C T G A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.739)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C T G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C T G C G T A A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.698)
More Information | Similar Motifs Found
motif file (matrix)
5 * A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)Arid5a/MA0602.1/Jaspar(0.744)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C T G A C T G A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)SPIC/MA0687.1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.662)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C T G A G T C A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)Plagl1/MA1615.1/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A G T C C G T A A C T G A C T G A C T G A G T C A G T C A G T C A G T C C G T A C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PLAGL2/MA1548.1/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C G T A C T G A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PBX1/MA0070.1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
11 * A G T C A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A G T C A G T C A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)Znf423/MA0116.1/Jaspar(0.616)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T C G T A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)MYB/MA0100.3/Jaspar(0.727)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A G T C A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C G T A G T C A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)SMAD3/MA0795.1/Jaspar(0.616)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A A C T G A G T C C G T A A C T G C G T A A C G T C G T A A C G T C G T A A C G T A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0126.1_Gata5_2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)HLF/MA0043.3/Jaspar(0.697)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A G T C A C G T C G T A A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)EBF1/MA0154.4/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.750)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)Smad4/MA1153.1/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.848)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)NR1I3/MA1534.1/Jaspar(0.738)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A C G T C G T A C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0149.1_Myb_2/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PH0037.1_Hdx/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A C T G C G T A A G T C A C T G A C G T A C T G A C T G C G T A A G T C 1e-3-9.112e+0050.00%0.01%0.0bp (94.8bp)CREB3L4/MA1474.1/Jaspar(0.817)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C T G A G T C A C G T A G T C A C T G A C G T A C T G A C T G A C T G A C G T 1e-3-9.112e+0050.00%0.01%0.0bp (13.7bp)MYC/MA0147.3/Jaspar(0.700)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A C T G A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C G T 1e-3-8.419e+0050.00%0.01%0.0bp (96.1bp)Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer(0.781)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G A C T G A C G T A C G T A G T C A C G T A G T C A G T C A G T C A G T C 1e-3-7.009e+0050.00%0.05%0.0bp (71.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.745)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T A G T C A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C T G 1e-3-7.009e+0050.00%0.05%0.0bp (75.4bp)GATA5/MA0766.2/Jaspar(0.717)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A G T C A C T G A C G T C G T A C G T A C G T A A C G T 1e-2-6.127e+0050.00%0.11%0.0bp (75.7bp)HOXD11/MA0908.1/Jaspar(0.862)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C T G A C G T C G T A A G T C A C G T C G T A C G T A A G T C 1e-2-5.840e+0050.00%0.15%0.0bp (71.5bp)PB0194.1_Zbtb12_2/Jaspar(0.712)
More Information | Similar Motifs Found
motif file (matrix)