Information for 3-GAAGAGGTCTGG (Motif 3)

A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GAAGAGGTCTGG---
-----GGTCTGGCAT
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAGAGGTCTGG-----
NNTNNTGTCTGGNNTNG
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAGAGGTCTGG
TAAGGCGTCTTG
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAAGAGGTCTGG
--VBSYGTCTGG
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAAGAGGTCTGG
----CTGTCTGG
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAAGAGGTCTGG-
-----TGTCTAGA
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAAGAGGTCTGG
----AGGCCTNG
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAGAGGTCTGG
--AGRGGTCA--
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAGAGGTCTGG---
GGCGAGGGGTCAAGGGC
A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAGAGGTCTGG
ANGNAAAGGTCA--
A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T