Information for 5-CAGTGAAGAATC (Motif 7)

A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background94.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF136/MA1588.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGAAGAATC-
GTCAACCAAGAATTC
A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGAAGAATC
TAATTCAATGAAGTG--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G A C G T A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGTGAAGAATC
--GTAAACAA--
A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGTGAAGAATC
---NGAAGC---
A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGTGAAGAATC--
ACCGTGACTAATTNN
A C G T A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGAAGAATC
NNNNTGCCAGTGATTG---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGTGAAGAATC
--ATGAATATTC
A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGTGAAGAATC-----
-AATGAACAATGGAATT
A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGAAGAATC----
NNNNNGAACAATTGANN
A C G T A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGTGAAGAATC
GGCMATGAAA----
A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T