Information for 14-GGAGATTATTTT (Motif 13)

A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
p-value:1e-4
log p-value:-9.246e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background118.3 +/- 80.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAGATTATTTT--
TAGAGGGATTAAATTTC
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAGATTATTTT--
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

DPRX/MA1480.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGAGATTATTTT
-NGGATTATCT-
A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAGATTATTTT--
NANAGGGATTAATTATN
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAGATTATTTT
-RGGATTAR---
A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAGATTATTTT--
TGTAGGGATTAATTGTC
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGAGATTATTTT-
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGAGATTATTTT
---AATTATT--
A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAGATTATTTT
GNGGATTAGN--
A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGAGATTATTTT-
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C