Information for 9-GGTGGCACAT (Motif 27)

A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A G T C A G T C C G T A A G T C A G T C
p-value:1e-3
log p-value:-7.777e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background51.1 +/- 67.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCACAT
GGTTGGCAT--
A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCACAT
VGCTGGCA---
A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCACAT-
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MXI1/MA1108.2/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGTGGCACAT---
---GACACATGGC
A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTGGCACAT
AGGTGTCA---
A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCACAT--
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCACAT
NGTGGGCAT--
A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTGGCACAT
NTTGGCANN-
A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTGGCACAT------
CGAAGCACACAAAATA
A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCACAT
NNTTGGCANN-
A C G T A C T G A C T G A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T