Information for 5-CACTGATCTCCT (Motif 5)

A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background105.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACTGATCTCCT-
--CTAATCCTCTT
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

GATA1/MA0035.4/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACTGATCTCCT
TTCTAATCTAT-
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACTGATCTCCT---
-----ATTTCCTGTN
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

GATA2/MA0036.3/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACTGATCTCCT
TTCTTATCTTT-
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACTGATCTCCT-
--AAGATATCCTT
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACTGATCTCCT
NNCTTATCTN--
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACTGATCTCCT
NCCTTATCTG--
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACTGATCTCCT--
NNCTCACCTCCTNN
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

GATA4/MA0482.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACTGATCTCCT
TTCCTTATCTTT-
A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACTGATCTCCT
AGGTCANTGACCTN--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T A G T C A C G T A G T C A G T C A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T