Information for 1-GAAGCGAGCCAC (Motif 3)

A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A C G T A G T C A C T G A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAAGCGAGCCAC
--AGCGCGCC--
A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCGAGCCAC
NGAAGC-------
A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCGAGCCAC
TGGCAGNCTGCCAG
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ZKSCAN5/MA1652.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAAGCGAGCCAC
GGAGGAGGTGAGAA--
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAGCGAGCCAC
CGGAAGTGAAAC--
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAAGCGAGCCAC
------ATCCAC
A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAAGCGAGCCAC
-----CAGCC--
A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAAGCGAGCCAC
TGGCACCATGCCAA
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCGAGCCAC
NNGTCGCGTGNCAC
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAAGCGAGCCAC
ATAAAGGCGCGCGAT
A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T