Information for 8-GACAAAAGCTTG (Motif 8)

A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C T G A C G T A G T C
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:GACAAAAGCTTG
-----AAGCTTG
A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACAAAAGCTTG
BMRVACAAWGGV---
A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAAGCTTG
AAAACAAAGG----
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACAAAAGCTTG
RACAAWGG----
A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACAAAAGCTTG
AAACAGAAGCAG-
A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T

SOX15/MA1152.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAAGCTTG
AAAACAATAG----
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GACAAAAGCTTG
AAACAGACAAAGGAAT-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACAAAAGCTTG
GAACAAAGGG---
A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACAAAAGCTTG
RAACAATGGN---
A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAAGCTTG
RNAACAATGG----
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T