| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 190.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0053.1_Rara_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT---- NNNGTGACCTTTGNNN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT ----TGACCT-- |
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|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT ----TGACCTYA |
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|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT- ---CTGACCTTTG |
|
|
|
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | AAGCTGACCTGT---- ----TGACCTTTNCNT |
|
|
|
NR4A1/MA1112.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT-- --NNTGACCTTTNN |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT ----TGACCYCT |
|
|
|
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT---- ----TGACCTYTGVMC |
|
|
|
ESR2/MA0258.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----AAGCTGACCTGT AGGNCANNGTGACCT-- |
|
|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAGCTGACCTGT- --NNTGACCTTTN |
|
|
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