Information for 15-GAATGCAAAA (Motif 20)

A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.112e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif76.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets137.0 +/- 0.0bp
Average Position of motif in Background97.9 +/- 84.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GAATGCAAAA-
ATATGCAAATT
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAATGCAAAA---
ATATGCAAATNNN
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GAATGCAAAA----
CAATTGCAAAAATAT
A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

POU2F3/MA0627.2/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GAATGCAAAA--
AATATGCAAATAA
A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T A C G T
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAATGCAAAA-
-AATGGAAAAT
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAATGCAAAA-
-TATGCAAATC
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T
A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAATGCAAAA-
-NATGGAAAAN
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAATGCAAAA---
-TATGCWAATBAV
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAATGCAAAA
TTATGCAAAT
A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAATGCAAAA----
TTGTATGCAAATTAGA
A C G T A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A