Information for 8-GGTAAGTGTA (Motif 17)

A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background121.0 +/- 78.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGTAAGTGTA
CAGGTAAGTAT-
A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGTAAGTGTA---
NTTAAGTGGTTNN
A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

MSANTD3/MA1523.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGTAAGTGTA-
-GTGAGTGNAC
A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T
A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTAAGTGTA
-TTAAGTGC-
A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTAAGTGTA
-TTAAGTGGT
A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

GFY(?)/Promoter/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTAAGTGTA--
GGGAATTGTAGT
A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTAAGTGTA
AAGGCAAGTGT-
A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

HES6/MA1493.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTAAGTGTA
GGCACGTGTT
A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGTAAGTGTA----
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGTAAGTGTA----
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G