Information for 12-TAATTTCTTGGC (Motif 12)

A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background105.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TAATTTCTTGGC---
----TACTTGGCAGA
A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

PH0028.1_En1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTCTTGGC
GNATTAATTAGTTNNC
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

Stat5a/MA1624.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TAATTTCTTGGC--
--NNTTCTTGGAAN
A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAATTTCTTGGC
ANNCATTAATTGCTNGN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAATTTCTTGGC
ANNCATTAATTGCTNGN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAATTTCTTGGC
--ATTTCCTGTN
A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Hmx3/MA0898.1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TAATTTCTTGGC
ATTNNTTAATTGCTTGT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TAATTTCTTGGC
ATTNNTTAATTGCTTGT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TAATTTCTTGGC---
------NTTGGCANN
A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0054.1_Hoxa7_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAATTTCTTGGC
CGAGTTAATTAATAAGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
T A G C T C A G G T C A C T A G C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A C T C G T A C G T A A C T G G T A C