Information for 4-ATTAAAACGG (Motif 24)

C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C G T A C G T A C G T A C G T C G T A C G T A A C G T
p-value:1e-3
log p-value:-8.777e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background76.2 +/- 76.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATTAAAACGG
ATTAAA----
C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAAACGG
NTAATTAATAT--
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTAAAACGG
NATTCAAAT--
A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTAAAACGG
NGCAATTAAA----
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATTAAAACGG-
TATCATTAGAACGCT
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTAAAACGG
CTAATTAA-----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTAAAACGG
CTCATTAAA----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTAAAACGG
GTAATTAA-----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATTAAAACGG
GNNCGCTTAAATCGG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

LMX1B/MA0703.2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAAACGG
TTAATTAAANT--
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C T G A C T G
C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T A C G T A C G T