Information for 2-GGCCTGGACTCG (Motif 3)

A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGGACTCG
AGGCCTAG-----
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGGACTCG
AGGCCTNG-----
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTGGACTCG
CAGGCCNNGGCCNN
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCCTGGACTCG
-GCTCGGSCTC-
A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGGACTCG
TGACCTTGAN---
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGCCTGGACTCG
NANAAGGGCGTGGTC---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGCCTGGACTCG
----TGAACTCA
A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGGACTCG-
ATGCCCGGGCATGT
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGGACTCG
TGACCTTGAV---
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTGGACTCG
NTGACCTTGAN---
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T A C G T A C G T