Information for 2-TCCGCAACTG (Motif 2)

A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TCCGCAACTG--
--ACCAACTGTC
A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCCGCAACTG--
--CGCAGCTGCG
A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCCGCAACTG-----
NNTNCGCACCTGTNGAN
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

IRF6/MA1509.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCGCAACTG
ACCGAAACT-
A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCGCAACTG------
CTCAGCAGCTGCTACTG
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

CEBPG/MA0838.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCGCAACTG
ATTGCGCAAT--
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCGCAACTG
ATTGCGCAAT--
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCCGCAACTG---
---CCAACTGCCA
A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

TCF4/MA0830.2/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCGCAACTG----
-CGGCACCTGCCCC
A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

CEBPE/MA0837.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCGCAACTG
ATTGCGCAAT--
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C T G
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T