| p-value: | 1e-3 |
| log p-value: | -7.345e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 18.7 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 78.0 +/- 0.0bp |
| Average Position of motif in Background | 105.9 +/- 64.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
| Match Rank: | 1 |
| Score: | 0.85 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGTAATTCCC GGAAATTCCC |
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RELA/MA0107.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.81 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGTAATTCCC GGAAATTCCC |
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MF0003.1_REL_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.77 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGTAATTCCC GGAAATCCCC |
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NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
| Match Rank: | 4 |
| Score: | 0.76 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTAATTCCC NGGGGATTTCCC |
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|
|
PH0053.1_Hoxa6/Jaspar
| Match Rank: | 5 |
| Score: | 0.75 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GGTAATTCCC-- NTNAGGTAATTACCTT |
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|
|
HOXB7/MA1501.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.74 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGTAATTCCC GNTAATTACC |
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|
|
REL/MA0101.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.73 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTAATTCCC GGGGATTTCC- |
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|
|
PH0061.1_Hoxb6/Jaspar
| Match Rank: | 8 |
| Score: | 0.71 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GGTAATTCCC-- TATTGGTAATTACCTT |
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|
|
RELB/MA1117.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGTAATTCCC--- --GAATTCCCCGG |
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|
|
PH0024.1_Dlx5/Jaspar
| Match Rank: | 10 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTAATTCCC---- GGGGTAATTAGCTCTG |
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