Information for 3-GTACCTTGCC (Motif 14)

A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T C G T A A G T C
p-value:1e-3
log p-value:-9.045e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background70.3 +/- 87.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTACCTTGCC--
-NNACTTGCCTT
A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GTACCTTGCC
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

HNF4G/MA0484.2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTACCTTGCC
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTACCTTGCC
NTGACCTTGAN
A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

HNF4A/MA0114.4/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTACCTTGCC
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTACCTTGCC
BNTGDCCTTG--
A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTACCTTGCC
NNACTTACCTN---
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTACCTTGCC--
NNNNATGACCTTGANTN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTACCTTGCC-----
TGGACTTTGNNCTNTG
A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTACCTTGCC
TGACCTTGAV
A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A