Information for 10-TTTGTTCAGGGC (Motif 11)

A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTCAGGGC
NCCTTTGTTC-----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTCAGGGC
YCTTTGTTCC----
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTCAGGGC
TNNTCCTTTGTTCTNNT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTCAGGGC
NNNTCCTTTGTTCTNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

SOX12/MA1561.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTTCAGGGC
NATTGTTCGGT--
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTCAGGGC
NNCTTTGTTNN----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTGTTCAGGGC
ATTGTT------
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTTGTTCAGGGC
NCCATTGTTC-----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTCAGGGC
CCTTTGTTTT----
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTTCAGGGC
CATTGTTCGG---
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T A C G T A C G T