Information for 12-TTGACAGCGT (Motif 29)

A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A C G T A C T G A C G T A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.574e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background32.4 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TTGACAGCGT
TTGACAGC--
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TTGACAGCGT
TTGACAGG--
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTGACAGCGT---
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TTGACAGCGT---
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTGACAGCGT---
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTGACAGCGT---
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTGACAGCGT
TTGACAG---
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGCGT---
GTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTGACAGCGT
VBTGWCAGCB-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTGACAGCGT
YTGWCADY--
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A G T C A C T G A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T