Information for 7-CTTTTGAGACCG (Motif 10)

A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTTGAGACCG
--TTTGAAACCG
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

HOXD10/MA1506.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
NTTTTACGACC-
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
NTTTTACGACC-
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
GGTTAGAGACCT
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

HOXC9/MA0485.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
NTTTTACGAC--
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
NTTTTACGACC-
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTGAGACCG
ANTTTTACGACC-
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTTTGAGACCG----
ATAAATGACACCTATCA
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

HOXB9/MA1503.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
NTTTTACGAC--
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAGACCG
NTTTTACGACT-
A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T