Information for 13-CCATTGAGTC (Motif 29)

A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.252e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background108.5 +/- 142.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCATTGAGTC--
NNNCCATTGTGTNAN
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

BATF3/MA0835.2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCATTGAGTC---
--NATGAGTCATN
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A

BATF/MA1634.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCATTGAGTC---
--NATGAGTCATN
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A

BATF::JUN/MA0462.2/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCATTGAGTC---
--NATGAGTCATN
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCATTGAGTC-----
-NNATGAGTCATNNN
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCATTGAGTC--
-NNTTGAGTGNN
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGAGTC
NNCCATTGTNN-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGAGTC
NNCCATTGTNN-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCATTGAGTC
-TATTGAYY-
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCATTGAGTC
CCATTGTTYB
A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C G T A G T C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G