Information for 8-GCTTTATGTGTG (Motif 9)

A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCTTTATGTGTG
AAATGATTTATGGCT-
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTATGTGTG
NNTGATTTATGNN--
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTTTATGTGTG
-TTTTATKRGG-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTATGTGTG-
ANTCCTTTGTCTNNNN
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGTGTG
GTTTTATTGGN-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATGTGTG
DGWTTTATGRCN-
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTTTATGTGTG-----
-NNNNTTGTGTGCTTNN
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGTGTG
NTTTTATDRG--
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCTTTATGTGTG-
-----AGGTGTGA
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTTTATGTGTG-
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A