Information for 11-ATCATGACCACA (Motif 12)

C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATCATGACCACA---
---NWAACCACADNN
C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:ATCATGACCACA--
----AAACCACAGC
C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATCATGACCACA-
---NAAACCACAG
C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCATGACCACA
GAGGTCATGACCTC-
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C A C G T

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATCATGACCACA
GAGGTCATGACCTC-
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ATCATGACCACA---
----AAACCACAGAN
C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ATF2/MA1632.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCATGACCACA---
--NATGACNTCATNN
C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCATGACCACA----
TGTCGTGACCCCTTAAT
A C G T C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCATGACCACA
AAGGTCATGACCTT-
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T A C G T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCATGACCACA
AAGGTCATGACCTT-
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T A C G T