Information for 18-CAGTTTCGTTGC (Motif 20)

A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF6/MA1509.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CAGTTTCGTTGC
-AGTTTCGGT--
A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C
A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTTCGTTGC-
TNTGGTTTCGATACN
A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGTTTCGTTGC-
-ACTTTCGTTTCT
A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAGTTTCGTTGC--
CAGTTTCGNTTCTN
A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTCGTTGC--
TNAGTTTCGATTTTN
A C G T A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTCGTTGC--
NTGGTTTCGGTTNNN
A C G T A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CAGTTTCGTTGC-
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTTCGTTGC
AGTTTCGGTTTCGTT--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C
C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGTTTCGTTGC--
TCAGTTTCATTTTCC
A C G T A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

RFX7/MA1554.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CAGTTTCGTTGC---
------CGTTGCTAT
A G T C C G T A A C T G A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T