Information for 19-GAGGAGAGAACC (Motif 20)

A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background174.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAGGAGAGAACC
GGAGGAGGTGAGAA--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A A C G T A C G T

TBX18/MA1565.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAGAACC
GGAGGTGTGAAA-
A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGAGAGAACC
AAGGTGTGAA--
A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGGAGAGAACC-
-TGGAATGTACCA
A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C A C G T
A C G T C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGAGAGAACC
-AGGTGTGAAA-
A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
A C G T C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGAGAACC-
ARGAGGMCAAAATGW
A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGAGAGAACC
-AGGTGTGAAA-
A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGGAGAGAACC
-AGGTGTTAAT-
A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

E2F6/MA0471.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAGAACC
GGGGGCGGGAAGG
A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGAGAGAACC
DAGGTGTBAA--
A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A A G T C A G T C
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T A C G T