Information for 1-CAACTTAGAAGC (Motif 1)

A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background100.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAACTTAGAAGC-
TTCAAAWTAAAAGTC
A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CAACTTAGAAGC
------NGAAGC
A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAACTTAGAAGC--
--AAACAGAAGCAG
A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

ZNF136/MA1588.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAACTTAGAAGC-
GTCAACCAAGAATTC
A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAACTTAGAAGC
ACCACTTAA----
A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAACTTAGAAGC
ATAACCACTTAAA---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAACTTAGAAGC
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAACTTAGAAGC
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAACTTAGAAGC
VSCACATCAAAG-
A C G T A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T

TCF7/MA0769.2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAACTTAGAAGC
-TCCTTTGATGT
A G T C C G T A C G T A A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T