Information for 11-CAGGATGCAT (Motif 17)

A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.832e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif37.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background124.6 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATGCAT
ANCAGGATGT--
A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CAGGATGCAT
AANNATCCGGATGTNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

ETV4/MA0764.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGATGCAT
ACAGGAAGTG-
A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGGATGCAT
AACAGGAAGT--
A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATGCAT
NDCAGGAARTNN
A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAGGATGCAT--
TACCCACAATGCATTG
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGGATGCAT
ACAGGAAGTG-
A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGGATGCAT
ACCCGGATGTA-
A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGATGCAT---
-AGGAAACAGCTG
A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAGGATGCAT----
----ATGMATATDC
A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C