Information for 24-GGGTAAGATG (Motif 38)

A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C A C G T A C G T C G T A A G T C A G T C A G T C
p-value:1e-2
log p-value:-6.887e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif76.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background113.7 +/- 123.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGATG
CAGGTAAGTAT
A C G T A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGTAAGATG----
--GWAAYHTGABMC
A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGATG
AGGGTAACAGC
A C G T A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGATG------
AAGGCCAGATGGTCCGG
A C G T A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

GATA6/MA1104.2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAAGATG-
NNAGATAAGATAN
A C G T A C G T A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTAAGATG-
NNNNGGGGGAAGANGG
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGTAAGATG-----
---CAAGATGGCGGC
A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

HAND2/MA1638.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGGTAAGATG--
--ACCAGATGGC
A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGTAAGATG---
GGAACAGATGGCA
A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGTAAGATG---
AGGGGTCAGAGGTCA
A C G T A C G T A C T G A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C G T A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A