Information for 2-CAGTCAATGGAG (Motif 3)

A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGTCAATGGAG
-RRTCAATA---
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAATGGAG-
CTCACACAATGGCGC
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTCAATGGAG
VRAACAATGG--
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGTCAATGGAG
-AAACAATGGAA
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGTCAATGGAG
-AAACAATGGCA
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGTCAATGGAG---
ACTATGAATGAATGAT
A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAATGGAG
VVRRAACAATGG--
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAATGGAG
ACCACTCAAAA---
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAATGGAG
AAAAGTCAA-----
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAATGGAG
HNRAATCAAT----
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T