Information for 20-GCATGGGTGC (Motif 30)

A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.873e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif47.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 78.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCATGGGTGC
TGCGTGGGYG-
A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCATGGGTGC
GTCATGCHTGRCTGS
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCATGGGTGC----
NNGCGTGTGTGCNGCN
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCATGGGTGC-
NGCGTGGGCGGR
A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

EGR1/MA0162.4/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCATGGGTGC--
GNGCGTGGGCGTGN
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C G T
T A C G A C T G T C A G A G T C T A C G A C G T T A C G A T C G T A C G G A T C T C A G A C G T T A C G A C T G

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCATGGGTGC
TGCGTGGGCGT
A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GCATGGGTGC
NGTCACGCTTGGCTGC
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCATGGGTGC---
-CGTGGGTGGTCC
A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

MXI1/MA1108.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCATGGGTGC
NNCATGTGNN-
A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T

EGR4/MA0733.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCATGGGTGC--
AANTGCGTGGGCGTNN
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A