Information for 6-GGTAATCC (Motif 21)

A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C G T C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.545e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif134.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background103.0 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX2/MA1547.1/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GGTAATCC-
-ATAATCCC
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GGTAATCC-
-CTAATCCC
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GGTAATCC
GCTAATCC
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GGTAATCC--
--TAATCCCN
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGTAATCC--
NYTAATCCYB
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGTAATCC--
GCTAATCCCC
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

DPRX/MA1480.1/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGTAATCC-
AGATAATCCC
A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGTAATCC-
-TTAATCCG
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GGTAATCC-
CTTAATCCC
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGTAATCC-
-YTAATCCY
A C T G A C T G A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C