Information for 19-TGAATTAATTTC (Motif 18)

A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3/MA0135.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TGAATTAATTTC
GATTAATTAATTT-
A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTAATTTC
NNTATTTAATTAATTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0146.1_Pou3f1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTAATTTC--
NANTTAATTAATTANNN
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGAATTAATTTC
NTAATTAATAT-
A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGAATTAATTTC-
CNNNTTAATTAATTNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0149.1_Pou3f4/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGAATTAATTTC---
AATTAATTAATTAATTC
A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTAATTTC
ANNATTTAATTAATTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0173.1_Uncx/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGAATTAATTTC-
CNCNTTAATTAATTANN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

PH0142.1_Pou1f1/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTAATTTC--
GANTTAATTAATTANNN
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TGAATTAATTTC
AGTTTTTAATTAATTTG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A G T C
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G