Information for 12-TGAGTATCTGCG (Motif 12)

A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G C G T A A C G T C G T A A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGAGTATCTGCG
--CGCAGCTGCG
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTATCTGCG---
NNGCGTGTGTGCNGCN
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTATCTGCG---
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

MSANTD3/MA1523.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTATCTGCG
GTGAGTGNAC---
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAGTATCTGCG---
NNNGTAACTANGNNA
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

DPRX/MA1480.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTATCTGCG
NGGATTATCT---
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGAGTATCTGCG-
NNAACATCTGTNN
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTATCTGCG
TTAAGTGCTT---
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGAGTATCTGCG
--NNCATCTGNN
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

PKNOX1/MA0782.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGAGTATCTGCG-
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A