| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 63.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXC10/MA0905.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA- ---NTTTTACGAC |
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Hoxa11/MA0911.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA-- --ANTTTTACGACC |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA- ---NTTTTATGAC |
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PH0064.1_Hoxb9/Jaspar
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA---- NGANTTTTATGGCTCN |
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HOXD11/MA0908.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA- ---NTTTTACGAC |
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|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 6 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA----- -NAATTTTACGAGNTNN |
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HOXA10/MA0899.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA-- ---NTTTTATTACN |
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|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA- ---NTTTTACGAC |
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|
|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA-- ---NTTTTACGACC |
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HOXD12/MA0873.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATTTTTATGA-- ---NTTTTACGACT |
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