Information for 6-ATAAAATTCTTA (Motif 8)

C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background143.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATTCTTA
CTACCAATAAAATTCT--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATTCTTA
AATGCAATAAAATTTAT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATTCTTA
TAGGTAATAAAATTCA--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATTCTTA
AGAGCCATAAAATTCG--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATAAAATTCTTA----
--AAAATTGTTATGAA
C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATTCTTA
ACGGCCATAAAATTAAT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------ATAAAATTCTTA
AAAGGTAATAAAATTT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATTCTTA
AACCCAATAAAATTCG--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATAAAATTCTTA
AACCAATAAAATTT---
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATAAAATTCTTA
GTCATAAAAN-----
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T