Information for 7-CATATTCACTTG (Motif 9)

A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATATTCACTTG
-ATATTTACATA
A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATATTCACTTG
GHATATKCAT---
A C G T A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATATTCACTTG
-ATATTTACATA
A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATATTCACTTG
GAATATTCAT---
A C G T A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATATTCACTTG-
-ACTTTCACTTTC
A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATATTCACTTG---
NNNTATTGAATTGNNN
A C G T A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

FOXA1/MA0148.4/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATATTCACTTG
NNATGTTTACAT-
A C G T A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G
G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATATTCACTTG------
-ATAACCACTTGAAAATT
A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CATATTCACTTG--
GACCACATTCATACAAT
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CATATTCACTTG--
-----CCACTTGAA
A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A