Information for 19-TAATGGCTGTTG (Motif 16)

A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TAATGGCTGTTG
NNCTAATGGNN----
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TAATGGCTGTTG-
---TGGCAGTTGG
A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TAATGGCTGTTG
GTTAATGGCC----
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TAATGGCTGTTG--
--NNGGCTGTTCCN
A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TAATGGCTGTTG
CCTTAATNGNTTTT-
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGCTGTTG
GTAATTGC-----
A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAATGGCTGTTG-
GCAACAGCTGTTGT
A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

HOXB8/MA1502.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGCTGTTG
NTAATTGC-----
A C G T A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
A C T G A C G T G T C A C G T A A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAATGGCTGTTG----
NNNTGGCAGTTGGTNN
A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TAATGGCTGTTG
----GGCVGTTR
A C G T C G T A C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C T G
A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A