Information for 5-CCCGCTTCAG (Motif 22)

A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C T G A C T G
p-value:1e-3
log p-value:-8.777e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background157.9 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCCGCTTCAG
---GCTTCC-
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCGCTTCAG---
-NNGCTTCTGTNN
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCTTCAG
TACCCGCATN--
A C G T A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCGCTTCAG----
NNCGCCTCAGGCNN
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

ZBTB7A/MA0750.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCGCTTCAG---
NCCACTTCCGGNN
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A T C G A T G C A T G C T C G A A T G C C A G T A G C T T A G C A T G C A C T G A T C G A T C G A G T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCTTCAG-
TCGTACCCGCATCATT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

ELK4/MA0076.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCGCTTCAG--
-CCACTTCCGGC
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCGCTTCAG
ACCACTTGAA
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCGCTTCAG
NSCACTYVAV
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCGCTTCAG
-CCACTTGAA
A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G T C C G T A A C T G
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A