| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 93.0 +/- 0.0bp |
| Average Position of motif in Background | 98.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
POL012.1_TATA-Box/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTATAAAATGCC--- GTATAAAAGGCGGGG |
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TBP/MA0108.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTATAAAATGCC--- GTATAAAAGGCGGGG |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TTATAAAATGCC CYHATAAAAN--- |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TTATAAAATGCC NCYAATAAAA---- |
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PH0078.1_Hoxd13/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TTATAAAATGCC CTACCAATAAAATTCT |
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|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TTATAAAATGCC GTCATAAAAN--- |
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|
|
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTATAAAATGCC CCYMATAAAA---- |
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|
|
PH0046.1_Hoxa10/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TTATAAAATGCC TAGGTAATAAAATTCA |
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HOXA10/MA0899.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TTATAAAATGCC GGTAATAAAAA--- |
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PB0174.1_Sox30_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TTATAAAATGCC TAAGATTATAATACGG- |
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