Information for 13-ATGTGGCACTTA (Motif 13)

C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:ATGTGGCACTTA-
-----GCACTTAA
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ATGTGGCACTTA-
----ACCACTTAA
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGCACTTA
AATGTATCAATT-
A C G T C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATGTGGCACTTA-
---AAGCACTTAA
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATGTGGCACTTA--
----ACCACTTGAA
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATGTGGCACTTA--
-ATAACCACTTAAA
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C G T
A C G T C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGTGGCACTTA-----
CTTAACCACTTAAGGAT
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGTGGCACTTA--
--RGGGCACTAACY
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ATGTGGCACTTA-
-----BCMATTAG
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATGTGGCACTTA--
----RSCACTYRAG
C G T A A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G