Information for 15-AGCAATCAATAC (Motif 16)

C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGCAATCAATAC---
AAAAAATCAATAAATA
A C G T C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGCAATCAATAC
HNRAATCAAT--
C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGCAATCAATAC
-CCAATCAA---
C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AGCAATCAATAC
CCATCAATCAAA--
A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AGCAATCAATAC
---RRTCAATA-
C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGCAATCAATAC--
ACAAGCAATTAATGAAT
A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGCAATCAATAC--
ACAAGCAATTAATGAAT
A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCAATCAATAC-
AAAAAATCAATAAT
A C G T C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PH0063.1_Hoxb8/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGCAATCAATAC-
ACCGGCAATTAATAAA
A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCAATCAATAC
RGCAATNAAA--
C G T A A C T G A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C
C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A A C G T A C G T