Information for 5-GGTGTCAC (Motif 18)

A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G T C C G T A A G T C A G T C
p-value:1e-2
log p-value:-5.894e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif257.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background97.7 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGTCAC----
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAC
AGGTGTCA-
A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

TBX3/MA1566.1/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GGTGTCAC
GAGGTGTGAA
A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAC
AGGTGTGA-
A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

TBX6/MA1567.1/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGTGTCAC
GAGGTGTGAA
A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAC-
AGGTGTGAAM
A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAC
AGGTGTGA-
A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGTGTCAC
DAGGTGTBAA
A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGTGTCAC
CCTGTCAA
A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAC
AGGTGTGA-
A C G T A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T