Information for 23-GAGAAGGTGAGG (Motif 26)

A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.427e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background106.5 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGGTGAGG-
GGAGGAGGTGAGAA
A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAGAAGGTGAGG--
---CAGGTAAGTAT
A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PRDM1/MA0508.3/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGAAGGTGAGG
NAGAGAAAGNA---
A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGAAGGTGAGG
NNGCAGGTGNN-
A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGAAGGTGAGG
NNGCAGGTGNN-
A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGAAGGTGAGG
NNGCAGGTGNN-
A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAAGGTGAGG
SDGCAGGTGCNS
A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGAAGGTGAGG
-CAAAGGTCAAA
A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGAAGGTGAGG
NBYCAAGGTCAC-
A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGAAGGTGAGG
NNGGCAGGTGCNN
A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G A C T G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G