Information for 12-TTTTATTCGATT (Motif 13)

A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A C T G C G T A C G T A A C G T C G T A C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATTCGATT
NNAATTTTATTGGNTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATTCGATT
NNATTTTATTGGNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATTCGATT
NNANTTTTATTGGNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTATTCGATT
NTNAATTTTATTGNATT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTATTCGATT
TTTTATTRGN--
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTTTATTCGATT-
---TAATCGATTA
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTTATTCGATT
TTTTATKRGG--
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

PAX3/MA0780.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTTTATTCGATT-
---TAATCGATTA
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTTATTCGATT-
-TTGATTRGRTTA
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T G A C T C G A T A C T G C G T A A C G T A C G T C T A G C T A G C T A G A G C T A G C T C G T A

PHOX2B/MA0681.2/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTCGATT---
NNATAATTTGATTANN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A