Information for 16-TCAGGGCACC (Motif 20)

A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C T G C G T A
p-value:1e-2
log p-value:-6.607e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif127.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background93.3 +/- 72.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCAGGGCACC
TNNGGGCAG-
A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCAGGGCACC---
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCAGGGCACC
WDNCTGGGCA--
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCAGGGCACC
TRAGGTCA--
A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCAGGGCACC
NGTGGGCAT-
A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCAGGGCACC
GCCTCAGGGCAT-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCAGGGCACC--
--TGGGCCCCCT
A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGGGCACC
-AAGGTCAC-
A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCAGGGCACC
CNGTCACGCCAC-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGGCACC-----
NNNGGGGCGCCCCCNN
A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A