| p-value: | 1e-4 |
| log p-value: | -9.944e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 6.0 +/- 0.0bp |
| Average Position of motif in Background | 85.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTCATAAAGTAC AAAGCTCGTAAAATTT |
|
|
|
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTCATAAAGTAC AAACCTCGTAAAATTT |
|
|
|
HOXC13/MA0907.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCATAAAGTAC GCTCGTAAAAA-- |
|
|
|
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTCATAAAGTAC CCYMATAAAA--- |
|
|
|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCATAAAGTAC NGYCATAAAWCH- |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTCATAAAGTAC CYHATAAAAN-- |
|
|
|
HOXC10/MA0905.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTCATAAAGTAC GTCGTAAAAT-- |
|
|
|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCATAAAGTAC NCYAATAAAA--- |
|
|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCATAAAGTAC VGCCATAAAA--- |
|
|
|
PH0112.1_Nkx2-3/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTCATAAAGTAC------ --CNTTAAGTACTTAANG |
|
|
|