Information for 8-AAGTTGAATTTA (Motif 8)

C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGTTGAATTTA----
GGACTGAATTCATGCC
C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAGTTGAATTTA--
NNNTATTGAATTGNNN
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGTTGAATTTA
---TTGACTTTT
C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGTTGAATTTA
-ATTTGAATT--
C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTGAATTTA----
NNNTTTTAATTAANNNN
A C G T C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGTTGAATTTA
TAATTNAATTAA
C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTGAATTTA---
NNATTGGACTTTNGNN
A C G T C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGTTGAATTTA
--CTGGAATGYA
C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
A C G T A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

NR1I3/MA1534.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTGAATTTA
AAAGTTCAT----
A C G T C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGTTGAATTTA
-ATTTGCATAT-
C G T A C G T A A C T G A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T