Information for 6-AAAATATCATGG (Motif 8)

C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
p-value:1e-4
log p-value:-9.666e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background117.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAATATCATGG--
AACAATAACATTGTT
A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAAATATCATGG
ATGCTAAAAATAGAA---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAATATCATGG-
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAATATCATGG
DCYAAAAATAGM----
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAAATATCATGG
TTCTAAAAATAGAAA--
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAATATCATGG
GAAAAAATTGCAAGG
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAATATCATGG
AAGATATCCTT-
C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAATATCATGG--
AAAAATAACAAACGG
A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

NR4A1/MA1112.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAATATCATGG
TTAAAGGTCAAA-
A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAAATATCATGG
GCTAAAAATAGC----
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C T G A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T