Information for 9-TTTAAAGGTAAG (Motif 9)

A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background105.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TTTAAAGGTAAG---
----CAGGTAAGTAT
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAAGGTAAG
ANGNAAAGGTCA-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTTAAAGGTAAG-
-TTAAAGGTCAAA
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T
A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

NR2F2/MA1111.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTTAAAGGTAAG-
--CAAAGGTCAAA
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T
A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTAAAGGTAAG--------
TTTTTAGAGATAAGAAATAAAG
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTAAAGGTAAG---
TCTCAAAGGTCACGAG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTAAAGGTAAG---
TCTCAAAGGTCACCTG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

GATA2/MA0036.3/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTTAAAGGTAAG--
---NNAGATAAGNN
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTAAAGGTAAG
--TCAAGGTCAN
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

GATA4/MA0482.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTTAAAGGTAAG---
---NNAGATAAGGNN
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A