Information for 15-TAACCTTATTCC (Motif 13)

A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORB/MA1150.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAACCTTATTCC
NTGACCTAATT--
A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T A C G T

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAACCTTATTCC
GTAACCTGATA--
A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAACCTTATTCC
NNTGACCTTTN---
A C G T A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAACCTTATTCC
TGACCTYTGVMC
A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAACCTTATTCC
-AACCTTATAT-
A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAACCTTATTCC
BTGACCTAVTTW-
A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAACCTTATTCC
TGACCTTGAT--
A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAACCTTATTCC
TAATCHGATTAC
A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAACCTTATTCC---
GAGCCCTTGTCCCTAA
A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PHOX2A/MA0713.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAACCTTATTCC
TAATTTAATTA-
A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A G T C A G T C
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T