Information for 6-CCACTCCAAT (Motif 16)

A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.448e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background77.1 +/- 54.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCACTCCAAT-
TAACCACTCAAGAA
A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCACTCCAAT
NSCACTYVAV-
A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCACTCCAAT
AASCACTCAA--
A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCACTCCAAT
RSCACTYRAG-
A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCACTCCAAT
CCACTTGAA-
A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCACTCCAAT
MRSCACTYAA--
A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCACTCCAAT
ACCACTCAAAA
A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCACTCCAAT--
TAAGCCACTTGAATTT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCACTCCAAT
AGCCACTCAAG-
A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCACTCCAAT--
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T