Information for 5-ATCAGTTA (Motif 20)

C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C G T A C T G C G T A A C G T
p-value:1e-2
log p-value:-5.459e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif397.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background96.9 +/- 75.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ATCAGTTA
TAATCAATTA
A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGTTA-
BRRCVGTTDN
A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATCAGTTA-------
NTTTTAGTTAACNNAGN
A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATCAGTTA-------
NNNTTAGTTAACTNANN
A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCAGTTA--
ACTAGTTAAC
C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATCAGTTA
TGTCGGTT-
A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCAGTTA----
AAAAACCAATTAAGAA
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCAGTTA--
NNCAGTTGNN
C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

PH0088.1_Isl2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATCAGTTA----
CAAAATCAATTAATTT
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCAGTTA--
ATAACCACTTAAA
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A