Information for 3-TGGACGCTTG (Motif 12)

A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C A C T G A C G T A G T C A G T C C G T A
p-value:1e-4
log p-value:-9.246e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background68.5 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGACGCTTG--
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGGACGCTTG
---AAGCTTG
A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PAX6/MA0069.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGACGCTTG----
TTCACGCATGAGTT
A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGACGCTTG
NCGCGGACGTTG-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

HES1/MA1099.2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGGACGCTTG--
--GGCACGTGGC
A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C T G C A T G G T A C C T G A A G T C C T A G G A C T C A T G A T C G A T G C

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGACGCTTG----
NNGTCGCGTGNCAC
A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGACGCTTG
----TGCGTG
A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

HNF4A/MA0114.4/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGACGCTTG-
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGACGCTTG
GTGGAT-----
A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGACGCTTG-
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C T G A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A