Information for 4-AGAGTTATTTCC (Motif 4)

C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A C G T C G T A C G T A A G T C A C G T A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0012.1_Elf3_1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AGAGTTATTTCC-----
----TTACTTCCTNGTN
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

ZNF652/MA1657.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGAGTTATTTCC
GAAAGAGTTAAA---
A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AGAGTTATTTCC----
------ATTTCCTGTN
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGAGTTATTTCC---
-----ATTTTCCATT
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGAGTTATTTCC---
-----ATTTTCCATT
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGTTATTTCC
TGATTTATGGCC
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGTTATTTCC-----
ATAGTTAATCCCCCNNA
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTTATTTCC----
NANANTTAATCCCNNNN
A C G T C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTTATTTCC---
NAATTTTATTACCNNN
A C G T C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGAGTTATTTCC-------
----TNACTTCCGGNTNNN
C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C T G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G T C A G C G A T G T A C T G A C A C G T