Information for 13-AAATCTTCAAGT (Motif 13)

C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAATCTTCAAGT------
-NANTTTCAAGTGGTTAN
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AAATCTTCAAGT--
-----NTCAAGTGG
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAATCTTCAAGT------
--AANTTCAAGTGGCTTN
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAATCTTCAAGT---
-----NTCAAGTGGN
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATCTTCAAGT------
--AAATTCAAGTGGNTTN
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATCTTCAAGT------
--AATTTCAAGTGGCTTN
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AAATCTTCAAGT
---GCTTCC---
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAATCTTCAAGT-
GAANGTTCTAGAA
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAATCTTCAAGT
CAAGCTT-----
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAATCTTCAAGT
GAATATTCAT--
C G T A C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T