Information for 5-ATCAATGTCCTT (Motif 5)

C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.058e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATCAATGTCCTT
-TCAATGACCTA
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCAATGTCCTT
HNRAATCAAT------
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATCAATGTCCTT
-AAGATATCCTT
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATCAATGTCCTT-
---BNTGDCCTTG
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATGTCCTT
RRTCAATA-----
A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATGTCCTT
NAGGTCAATGACCTC
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATCAATGTCCTT
-TCAAGGTCATA
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATCAATGTCCTT--
----ATGACCTTGA
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATCAATGTCCTT----
----GTGACCTTGRVN
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATCAATGTCCTT---
----NTGACCTTGAN
C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C