Information for 10-TCTATACAGC (Motif 29)

A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T C G T A A C G T C G T A A C T G C G T A
p-value:1e-3
log p-value:-7.805e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background91.5 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TCTATACAGC
CGTCTACACGGG
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCTATACAGC-----
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCTATACAGC-----
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCTATACAGC-----
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCTATACAGC
CGTCTAGACA--
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCTATACAGC
TGTCTAGACA--
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCTATACAGC
TCTAGACA--
A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCTATACAGC
----CACAGN
A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TCTATACAGC
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------TCTATACAGC
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T