Information for 3-CCATCTCAGAGT (Motif 3)

A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCATCTCAGAGT-
NNNTCCATCCCATAANN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

ZNF410/MA0752.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCATCTCAGAGT----
TCCATCCCATAATACTC
A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCATCTCAGAGT
VCCTCTCTGDDY
A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCATCTCAGAGT-
AACAATTTCAGTGTT
A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCATCTCAGAGT
NNCCATCTGTNNN-
A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCATCTCAGAGT
VSCACATCAAAG-
A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCATCTCAGAGT
NNNCCATCTGTNN--
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCATCTCAGAGT--
GTCAACCAAGAATTC
A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

TCF7/MA0769.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCATCTCAGAGT-
--ANATCAAAGNN
A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

HAND2/MA1638.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCATCTCAGAGT
NNCATCTGNN---
A C G T A G T C A G T C C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C G T
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T