Information for 11-AGGACATAAGAC (Motif 12)

C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C G T C G T A A C G T A C T G A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX1/MA0878.2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGACATAAGAC
-GGCCATAAAAC
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

CDX4/MA1473.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGACATAAGAC
-GGCAATAAAAC
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C

GATA6/MA1104.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGACATAAGAC--
-NNAGATAAGATAN
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T
A C G T C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

GATA2/MA0036.3/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGACATAAGAC
-NNAGATAAGNN
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGACATAAGAC
--AACATATGTC
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGACATAAGAC
--NAGATAAGNN
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGACATAAGAC
--CAGATAAGGN
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGACATAAGAC
-NVAGATAAGR-
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGACATAAGAC-
CGAAGCACACAAAATA
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGACATAAGAC------
TTTTTAGAGATAAGAAATAAAG
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G