Information for 7-GTCGTAAYCTTT (Motif 13)

C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T
Reverse Opposite:
C T G A G T C A C T G A A T C G C T G A C G A T A C G T C G T A T G A C A T C G G T C A A G T C
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.640
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTCGTAAYCTTT
----CAAGCTT-
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTCGTAAYCTTT----
----TGACCTTTNCNT
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

GRHL2/MA1105.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCGTAAYCTTT---
---NAAACCTGTTTN
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCGTAAYCTTT
--NYTAATCCYB
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCGTAAYCTTT----
NNNNTGACCTTTNNNN
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAYCTTT-
CAAGGTCGTAAAATCTT
A C G T A C G T A C G T A C G T C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

NR4A1/MA1112.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCGTAAYCTTT--
--NNTGACCTTTNN
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T A C G T A C G T
A C G T A C G T G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCGTAAYCTTT
---YTAATCCY-
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCGTAAYCTTT----
NNNGTGACCTTTGNNN
C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAYCTTT
TAAAGTCGTAAAACGT
A C G T A C G T A C G T A C G T C T A G A C G T A T G C A C T G A C G T C G T A C G T A G A C T A T G C A G C T A C G T A G C T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T