Information for 1-AAGAGTGTGCCC (Motif 2)

C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background119.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAGAGTGTGCCC------
--GGGTGTGCCCAAAAGG
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGTGTGCCC--
NNGCGTGTGTGCNGCN
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGAGTGTGCCC
NTGGGTGTGGCC
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AAGAGTGTGCCC---
------ATGCCCACC
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ZSCAN4/MA1155.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGAGTGTGCCC
TTTTCAGTGTGTGCA-
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGAGTGTGCCC
-TGGGTGTGGCN
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C
A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAGAGTGTGCCC--
----GTGGGCCCCA
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGAGTGTGCCC--
--GAGCGTGACCCC
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGAGTGTGCCC--
----CTGTTCCTGG
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGAGTGTGCCC-----
NNGTATGTGCACATNNN
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G