Information for 5-AGAATAAACC (Motif 15)

C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.878e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 73.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGAATAAACC---
--AATAAACAATN
C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGAATAAACC
CCCAATAAAAC
A C G T C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGAATAAACC--
----TAATCCCN
C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

HOXA13/MA0650.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAATAAACC
CCCAATAAAAC
A C G T C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGAATAAACC
-AAATAAACA
C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAATAAACC--
WWTRTAAACAVG
C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAATAAACC-
WWATRTAAACAN
A C G T C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

CDX4/MA1473.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAATAAACC
GGCAATAAAAC
A C G T C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C

CDX2/MA0465.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAATAAACC
AAGCAATAAAAA
A C G T A C G T C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAATAAACC-
NGYCATAAAWCH
A C G T C G T A A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A