Information for 10-AACTTTTTAATG (Motif 10)

C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AACTTTTTAATG
-----TTTAAT-
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AACTTTTTAATG--
-----TTTAATGAN
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

HOXB13/MA0901.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AACTTTTTAATG---
-NNATTTTATTGGNN
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACTTTTTAATG----
NTNAATTTTATTGNATT
A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AACTTTTTAATG-----
-AGTTATTAATGAGGTC
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AACTTTTTAATG-
-----GKTAATGR
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

CDX2/MA0465.2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AACTTTTTAATG---
---NTTTTATTGCNN
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AACTTTTTAATG---
-----TTTAATTGCN
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACTTTTTAATG----
NNANTTTTATTGGNNN
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AACTTTTTAATG
---ATTTGAATT
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T