Information for 6-TTCACTCTTTAT (Motif 4)

A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A C T G C G T A A C T G A C G T A C T G C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/MA1657.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTCACTCTTTAT
NTTAACTCTTTN-
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTCACTCTTTAT---
TTAACCCTTTVNKKN
A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCACTCTTTAT
TTCACACCTT--
A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTCACTCTTTAT
NTTTTCACACCTT--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTCACTCTTTAT-
NNTTTTCACACCTTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTCACTCTTTAT
TTMACACCTT--
A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCACTCTTTAT
TTTCACACCT---
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

PAX6/MA0069.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCACTCTTTAT--
TTCACGCATGAGTT
A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCACTCTTTAT
TTTCACACCT---
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTCACTCTTTAT
--NNCTCATTAT
A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T