Information for 18-GGCACTAATGAC (Motif 20)

A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA4/MA1496.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GGCACTAATGAC
----NTAATGAC
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C

HOXB4/MA1499.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GGCACTAATGAC
----NTAATGAT
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

HOXD3/MA0912.2/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GGCACTAATGAC
----CTAATTAC
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

PH0039.1_Mnx1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCACTAATGAC---
NNNCACTAATTANTNN
A C G T A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

HOXC4/MA1504.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGCACTAATGAC
----NTAATGAN
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

HOXD4/MA1507.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGCACTAATGAC
----NTAATGAN
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

GSX2/MA0893.2/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGCACTAATGAC
----CTAATTAC
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T G A T C G A C T G T C A C T G A A G C T A C G T C T G A A T G C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGCACTAATGAC
RGGGCACTAACY--
A C G T A C G T A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

HOXA2/MA0900.2/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GGCACTAATGAC
----NTAATTAN
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A T G C A G C T C G T A C G T A A C G T A C G T C T G A A T G C

VAX2/MA0723.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGCACTAATGAC
----CTAATTAC
A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C