Information for 10-GGTTGGCTATGG (Motif 11)

A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.0 +/- 0.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTTGGCTATGG--
CGGTTGCTATGGCA
A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTTGGCTATGG
-NTTGGCANN--
A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGGCTATGG
TGATTGGCTANN-
A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTTGGCTATGG--
CTGTTGCTATGGCA
A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGGCTATGG--
NNCGTTGCTATGGNN
A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGTTGGCTATGG
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTTGGCTATGG-
---TGGGTGTGGC
A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTGGCTATGG------
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGGCTATGG
CCGATTGGCT----
A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTTGGCTATGG
GGTTGGCAT---
A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T