Information for 25-AGCAATGGAAAG (Motif 22)

C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-9.167e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets166.0 +/- 0.0bp
Average Position of motif in Background105.3 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AGCAATGGAAAG-
---AATGGAAAAT
C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC4/MA1525.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGCAATGGAAAG-
---AATGGAAAAT
C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGCAATGGAAAG-
---AATGGAAAAT
C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGCAATGGAAAG-
---NATGGAAAAN
C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGCAATGGAAAG-
---NNTGGAAANN
C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGCAATGGAAAG
GGYAATGAAA--
C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCAATGGAAAG
GAACAATGG----
A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCAATGGAAAG
VRAACAATGG----
A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCAATGGAAAG
AAACAATGGAA--
A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCAATGGAAAG
HDGYAATGAAAN-
A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A C G T A C G T A A C T G
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A A C G T