Information for 3-GGGAGATC (Motif 19)

A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A G T C A G T C A G T C
p-value:1e-2
log p-value:-5.886e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif259.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background96.8 +/- 80.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF135/MA1587.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGATC----
TCAGGAGGTCGAGG
A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGAGATC--
GGGAGGACNG
A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF75D/MA1601.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGGAGATC
ATGTGGGAAA--
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGATC
VTGYGKGGGAGK--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGAGATC-
CGTGGGTGGTCC
A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGAGATC-
YSTGGGTGGTCT
A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGGAGATC-
CTCCCTGGGAGGCCN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGATC----
NTNTGGGGGGTCNNNA
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------GGGAGATC
RGSMTBCTGGGAAAT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGAGATC
CGGAGC--
A C T G A C T G A C T G C G T A A C T G C G T A A C G T A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T