Information for 9-CTATTAGCCTCA (Motif 10)

A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTATTAGCCTCA
ATCCATTAGCA---
A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTATTAGCCTCA
ACCGATTAG-----
A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTATTAGCCTCA
GCAATTAG-----
A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTATTAGCCTCA
BCMATTAG-----
A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTATTAGCCTCA---
---AAAACCTCAAAT
A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

EN2/MA0642.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTATTAGCCTCA
CCCAATTAGC----
A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTATTAGCCTCA
GCTGTTACCCT--
A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTATTAGCCTCA
CCAATTAA-----
A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTATTAGCCTCA--
----KGGCCYCWTD
A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTATTAGCCTCA
AAAAACCATTAAGG---
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T A C G T A C G T