Information for 4-CCATAGGGTTTT (Motif 4)

A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background173.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCATAGGGTTTT
NGCCATATGGTG--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCATAGGGTTTT
ACCATATGGT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCATAGGGTTTT
ANCATATGGT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCATAGGGTTTT
NAACATATGTTT--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCATAGGGTTTT
GCCATATGGT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCATAGGGTTTT
AACATATGTT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCATAGGGTTTT
ANCATATGGT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T A C G T A C G T

ATOH7/MA1468.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCATAGGGTTTT
GACATATGTT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCATAGGGTTTT
ANCATATGTT---
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCATAGGGTTTT
NNACATATGGCN--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G A C G T A C G T