| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 19.0 +/- 0.0bp |
| Average Position of motif in Background | 43.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC-- --AGGTCAAGGTCA |
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RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC-- --AGGTCAAGGTCA |
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|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC --AGGTCA---- |
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|
|
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC-- ACATGCCCGGGCAT |
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|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC TRAGGTCA---- |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC -GAGGTCAT--- |
|
|
|
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GCAGGTCAGGGC GGGGCTYGKCTGGGA |
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|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GCAGGTCAGGGC ATCAAGGTCA---- |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCAGGTCAGGGC CGAGGTCAC--- |
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|
|
RARB(var.3)/MA1552.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GCAGGTCAGGGC--- -AAGGTCATGACCTT |
|
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