Information for 2-CCGCTATTTG (Motif 2)

A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C T G A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCGCTATTTG----
--KCTATTTTTRGH
A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCGCTATTTG---
---CTATTTTTGG
A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCGCTATTTG----
--GCTATTTTTGGM
A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

OVOL2/MA1545.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCGCTATTTG
GTACCGTTATGTG
A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

YY2/MA0748.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCGCTATTTG
CGCCGCCATNN-
A C G T A C G T A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T

OVOL1/MA1544.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCGCTATTTG
AAAACCGTTATTTG
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCTATTTG--
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGCTATTTG----
--GCTATTTTTAGC
A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PH0109.1_Nkx1-1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGCTATTTG-----
NCCCACTAATTAGCGCA
A C G T A C G T A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

PH0032.1_Evx2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGCTATTTG-----
CACCGCTAATTAGCGGT
A C G T A C G T A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T