Information for 6-CTCTCCTAGTGG (Motif 6)

A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTCCTAGTGG--
---NNCTAATGGNN
A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCCTAGTGG---
TAGCGCCCCCTGGTGGCCA
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCTCCTAGTGG
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTCTCCTAGTGG---
ANAGTGCCACCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CTCTCCTAGTGG--
--------GTGGAT
A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CTCTCCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTCCTAGTGG-
---NTCAAGTGGN
A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCCTAGTGG-
NGGCCTCCCAGGGAG
A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCCTAGTGG--
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCTAGTGG---
NNNNTGCCAGTGATTG
A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G