Information for 3-ATTGTCCTCTCA (Motif 3)

C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATTGTCCTCTCA
CTCATTGTC------
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTCCTCTCA
CNNNTATTGTTCNNNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATTGTCCTCTCA
CCATTGTTTT----
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTGTCCTCTCA
CCATTGTTCT----
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATTGTCCTCTCA
--TGACCTYA--
C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTGTCCTCTCA
TTCAATTGTTCTAAAA
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTCCTCTCA
AATCAATTGTTCCGCTA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTCCTCTCA
NNTTTATTGTTCTNNN-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTGTCCTCTCA
CCATTGTTNY----
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTGTCCTCTCA
CCATTGTTYYBB--
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G A C G T A C G T