Information for 11-GCAAAAAATGAT (Motif 11)

A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.834e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background156.0 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAATGAT
CAATTGCAAAAATAT--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAAATGAT
AAGCAATAAAAA--
A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCAAAAAATGAT--
GCAAAACATTACTA
A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAAATGAT
TACTGGAAAAAAAA--
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAAATGAT----
NANTGGAAAAANTGAGTCAN
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

ZNF384/MA1125.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAAATGAT
TTTAAAAAAAAA--
A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCAAAAAATGAT-----
NNTAAAAACGATGTTNT
A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCAAAAAATGAT
ATTTGCATACAATGG-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAAAAAATGAT
GGCCATAAATCA-
A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

SOX14/MA1562.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAAAAAATGAT
CCGAACAATG--
A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A A C G T
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T A C G T