Information for 6-GAAGCCTCAAAC (Motif 8)

A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background104.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAGCCTCAAAC
AAAACCTCAAAT
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCTCAAAC
NGAAGC-------
A C G T A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAGCCTCAAAC
-AAACCACAGAN
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAGCCTCAAAC
-AAACCACANN-
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

SIX2/MA1119.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAAGCCTCAAAC
AACTGAAACCTGATAC
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGCCTCAAAC
-AAACCGCAA--
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAAGCCTCAAAC
-KGGCCYCWTD-
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T

ZNF274/MA1592.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCCTCAAAC-
NNCGAGAACTCATACN
A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAGCCTCAAAC-
--AGCCTCAGGCA
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGCCTCAAAC
-CGGTTTCAAA-
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A G T C C G T A C G T A C G T A A G T C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T