Information for 10-CATATAAATGAG (Motif 11)

A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATATAAATGAG----
-GTATAAAAGGCGGGG
A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATATAAATGAG----
-GTATAAAAGGCGGGG
A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATATAAATGAG---
AGTTATTAATGAGGTC
A C G T A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATATAAATGAG
WATGCAAATGAG
A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PBX2/MA1113.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATATAAATGAG-
GTCATAAATCATT
A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATATAAATGAG
ATGAATATTCATGAG
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATATAAATGAG-----
GACGATAATGAGCTTGC
A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATATAAATGAG--
NNCCATAAATCATNN
A C G T A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATATAAATGAG---
NTTNTATGAATGTGNNC
A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATATAAATGAG
NANTTATATATAANGN
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C T G
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A