Information for 1-AGGAGTAGAC (Motif 1)

C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background144.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGTAGAC-
NCNGTGTAGACG
A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGAGTAGAC
AAGGGATTAGAA
A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGAGTAGAC
NGGATTAN--
C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGAGTAGAC--
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGAGTAGAC
AAGAGGATTAG--
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTAGAC--
NTNNNAGGAGTCTCNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGAGTAGAC
-GGATTAGC-
C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGTAGAC
VRGGATTARN-
A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

ZNF684/MA1600.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGTAGAC-----
TAAAGGGGTGGACTGTAT
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T G A C G T A C T A G C T A G A C T G T A C G G C A T C T A G A T C G T G C A T A G C G C A T C T A G A G C T T C G A G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGAGTAGAC
RGGATTAR--
C G T A A C T G A C T G C G T A A C T G A C G T C G T A A C T G C G T A A G T C
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T