Information for 15-GCCAAGAAGGTT (Motif 15)

A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAGAAGGTT
NNTGCCAAGNN----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGAAGGTT
CGTGCCAAG------
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a/MA1624.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGAAGGTT
TTTCCAAGAAAT--
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGAAGGTT
GGTGCCAAGT-----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCAAGAAGGTT-----
-TCGCGAAGGTTGTACT
A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGAAGGTT------
NNTTCTGGAANNTTCTAGAA
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGAAGGTT
ATTTCCAAGAA----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCAAGAAGGTT
-ACAGGAAGTG-
A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
A C G T T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCCAAGAAGGTT-
------AAGCTTG
A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGAAGGTT
TTGCCAAG------
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T