Information for 20-GGTGCTATGCCT (Motif 22)

A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C C G T A A C G T C G T A A C T G A G T C C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background119.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGTGCTATGCCT
NCCGTTGCTANGNGN
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RFX1/MA0509.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTGCTATGCCT
CTGTTGCTATGGCA
A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTGCTATGCCT
AGATGCAATCCC-
A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGTGCTATGCCT
NNCGTTGCTATGGNN
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGTGCTATGCCT
CTGTTGCTAGGS--
A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTGCTATGCCT
CGGTTGCTATGGCA
A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GGTGCTATGCCT----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

ZNF682/MA1599.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGTGCTATGCCT-
NNAGGGGCTTGGCCNN
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTGCTATGCCT
----CNAGGCCT
A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTGCTATGCCT
----CTAGGCCT
A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T