Information for 5-TGCTGTCGGG (Motif 11)

A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C C G T A
p-value:1e-4
log p-value:-9.268e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGTCGGG-----
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGCTGTCGGG
--CTGTCTGG
A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

NRL/MA0842.2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGTCGGG
AAAAGTGCTGACG--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
C T G A C G T A C G T A G C T A C T A G G A C T C T A G T G A C A G C T C A T G C T G A A G T C C T A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCTGTCGGG
-GCTGTG---
A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGTCGGG
NNTCTGCTGTNA--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCTGTCGGG
AAAATGCTGACT--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGTCGGG
NNCCTGCTGNG---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCTGTCGGG
-GCTGTCAA-
A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

BCL6/MA0463.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCTGTCGGG-----
ATGCTTTCGAGGAATT
A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C T A G G T A C G C A T A C G T G C A T A G T C A C T G G C T A C T A G A C T G C T G A C G T A G A C T C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCTGTCGGG
VBSYGTCTGG
A C G T A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G