Information for 5-TCAGCACTCGAG (Motif 7)

A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCAGCACTCGAG
--RSCACTYRAG
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCAGCACTCGAG
--NSCACTYVAV
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCAGCACTCGAG
-MRSCACTYAA-
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCAGCACTCGAG
---CCACTTGAA
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCACTCGAG
TGAGTCAGCA------
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCAGCACTCGAG
-AASCACTCAA-
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCAGCACTCGAG----
ATAACCACTTGAAAATT
A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NKX2-5/MA0063.2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCAGCACTCGAG-
--ACCACTCAAAA
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T
A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGCACTCGAG
-AGCCACTCAAG
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCACTCGAG
NGTCAGCANTTT--
A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C A C T G C G T A A C T G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T