Information for 7-TGGCAGCTATGG (Motif 9)

A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGCAGCTATGG
TGCCAGCB----
A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T A C G T

RFX3/MA0798.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGCAGCTATGG--
CGGTTGCTATGGCA
A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAGCTATGG
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGCAGCTATGG--
CTGTTGCTATGGCA
A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCTATGG--
NNNNAGCAGCTGCTGAN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCTATGG
CTTGGCAA------
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAGCTATGG--
NNCGTTGCTATGGNN
A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCTATGG
-CGCAGCTGCG-
A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCAGCTATGG
TGTCANYT----
A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCTATGG
NTTGGCANN-----
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C T G A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T