Information for 13-GAATCCACTC (Motif 29)

A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.096e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif23.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background73.5 +/- 66.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GAATCCACTC-
SSAATCCACANN
A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GAATCCACTC
TCCAATCCACA-
A C G T A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GAATCCACTC
--ATCCAC--
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAATCCACTC-----
-TAACCACTCAAGAA
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAATCCACTC--
--MRSCACTYAA
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAATCCACTC---
--AGCCACTCAAG
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAATCCACTC--
--AASCACTCAA
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

MSANTD3/MA1523.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAATCCACTC--
--GTACACTCAC
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAATCCACTC---
---NSCACTYVAV
A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

MZF1/MA0056.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAATCCACTC--
CAAATCCCCACTT
A C G T A C T G C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T