Information for 2-AATTGCCTTCTG (Motif 3)

C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATTGCCTTCTG
NNACTTGCCTT---
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:2
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCCTTCTG
ATNNACTAATTACTTT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AATTGCCTTCTG---
---NNGCTTCTGTNN
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

NEUROD1/MA1109.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AATTGCCTTCTG---
--NNNCCATCTGTNN
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AATTGCCTTCTG
--TTGACTTTT-
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCCTTCTG
NTNAGNTAATTACCTN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATTGCCTTCTG-
AGAAATGACTTCCCT
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AATTGCCTTCTG--
---NNCCTGCTGNG
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AATTGCCTTCTG----
---NNCCATCTGTNNN
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AATTGCCTTCTG--
----GCCATCTGTT
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T