Information for 19-GACAGAGGGCCT (Motif 19)

A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A C G T A G T C
p-value:1e-4
log p-value:-9.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background91.4 +/- 91.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GACAGAGGGCCT
GGACAGATGGCAG
A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACAGAGGGCCT
AACAGATGGC--
A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGGGCCT
GGAACAGATGGCA-
A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACAGAGGGCCT
AACAGATGGT--
A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

CTCFL/MA1102.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACAGAGGGCCT
AGCAGGGGGCGC
A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACAGAGGGCCT-
-ACAAAGGNBCCT
A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGAGGGCCT
AACAKATGGY--
A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GACAGAGGGCCT--
AAGGCCAGATGGTCCGG
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGGGCCT
CCGCCCAAGGGCAG
A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

HAND2/MA1638.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACAGAGGGCCT
ACCAGATGGC--
A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C G T
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T