Information for 7-GCGTTAGTTGAT (Motif 5)

A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A A G T C A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0173.1_Uncx/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTAGTTGAT----
CNCNTTAATTAATTANN
A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCGTTAGTTGAT--
----TAATTGATTA
A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTAGTTGAT---
ANNCATTAATTGCTNGN
A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTAGTTGAT---
ANNCATTAATTGCTNGN
A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGTTAGTTGAT----
NNNTTAATTGGTTTTT
A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTAGTTGAT---
ATTCNTTAATTGCTTGT
A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTAGTTGAT---
ATTCNTTAATTGCTTGT
A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTAGTTGAT--
CACGGCAGTTGGTNN
A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTAGTTGAT--
NNNTGGCAGTTGGTNN
A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGTTAGTTGAT---
ATTNNTTAATTGCTTGT
A C G T A C G T A C T G A G T C A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T