Information for 4-GAATTCATGG (Motif 24)

A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.643e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background98.9 +/- 92.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAATTCATGG----
ACATTCATGACACG
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GAATTCATGG-
GGACTGAATTCATGCC
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

ZNF136/MA1588.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAATTCATGG-----
GAATTCTTGGTTGAC
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C G A C G A T A G C T G A T C A G C T C A G T C T A G C T A G G A C T C A G T C T A G C T G A G T A C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAATTCATGG--
--TTTCATKGCC
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GAATTCATGG--
AAGGCGAAATCATCGCA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAATTCATGG--
--TTTNATTGCY
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAATTCATGG--
--TTTTATGGCB
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAATTCATGG
RCATTCCWGG
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAATTCATGG
GCATTCCAGN
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Stat5a/MA1624.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAATTCATGG---
-NNTTCTTGGAAN
A C T G C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A