Information for 13-AATTAAGACTAG (Motif 14)

C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0175.1_Vax2/Jaspar

Match Rank:1
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------AATTAAGACTAG
GTGCACTAATTAAGAC---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C A C G T A C G T A C G T

PH0133.1_Pax7/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AATTAAGACTAG
CGAACTAATTAGTACTA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
G T A C T A C G G C T A G T A C G A T C G A C T T C G A C G T A G C A T A G C T C T G A C T A G A C G T G C T A T G A C C A G T C T G A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAGACTAG
NTAATTAATAT---
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGACTAG
CTAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAGACTAG
NCAATTAN------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGACTAG
CTAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

LMX1A/MA0702.2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAGACTAG
NTAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A C G T A G C T C G T A C T G A A C G T A C G T T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ISX/MA0654.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGACTAG
CTAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A G T C G A C T G T C A G T C A A C G T A C G T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Shox2/MA0720.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGACTAG
CTAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
A G T C G A C T G C T A G T C A G C A T C A G T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGACTAG
GTAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C T G
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T