Information for 6-CCAAAGGTTGTA (Motif 7)

A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C T G A C T G
p-value:1e-4
log p-value:-9.944e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGGTTGTA--
TCGCGAAGGTTGTACT
A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAAAGGTTGTA
GGGTCCAAAGGTCAC-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCAAAGGTTGTA
---AAGCTTG--
A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCAAAGGTTGTA
RACAAWGG-----
A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAAAGGTTGTA
AATTCAACAGGTGGTT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCAAAGGTTGTA
NTGCCCANNGGTNA--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAAAGGTTGTA
TCCAGATGTT---
A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAAAGGTTGTA
AAAACAAAGG-----
A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAAAGGTTGTA
GGCACCCAGGGGTGC-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

SCRT2/MA0744.2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAAAGGTTGTA
AAAGCAACAGGTGGTT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C G T C G T A
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T