| p-value: | 1e-3 |
| log p-value: | -8.081e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 14.4 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 20.0 +/- 0.0bp |
| Average Position of motif in Background | 44.2 +/- 64.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CCTAGAGTGC- -BTBRAGTGSN |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CCTAGAGTGC- -CTYRAGTGSY |
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Nkx2-5(var.2)/MA0503.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CCTAGAGTGC-- -CTTGAGTGGCT |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CCTAGAGTGC-- --TTGAGTGSTT |
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NKX2-5/MA0063.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCTAGAGTGC- NNTTGAGTGNN |
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|
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCTAGAGTGC-- --TTRAGTGSYK |
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|
|
PB0140.1_Irf6_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CCTAGAGTGC- NNNACCGAGAGTNNN |
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BCL6/MA0463.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CCTAGAGTGC-- NATTCCTCGAAAGCAN |
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NKX2-2/MA1645.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCTAGAGTGC--- NNNTTGAGTGGNNN |
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PB0138.1_Irf4_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CCTAGAGTGC- GNNACCGAGAATNNN |
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