Information for 21-CTCCTGTAAAGC (Motif 28)

A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.478e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background175.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BCL6/MA0463.2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTGTAAAGC--
NATTCCTCGAAAGCAN
A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
G T C A C T G A G C A T G A C T T G A C G A T C C G A T T G A C T C A G C G T A T G C A C G T A C A T G G A T C C T G A C G A T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGTAAAGC--
TTTCCTGGAAAGNNN
A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGTAAAGC--
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTGTAAAGC-
TGAATTCCTAGAAAGCA
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCCTGTAAAGC
--GCTGTCAA--
A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGTAAAGC--
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGTAAAGC--
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

SNAI2/MA0745.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGTAAAGC
ATGCACCTGTCAT--
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCCTGTAAAGC
TNNTGCTACTGTNNNN-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCTGTAAAGC
--CYHATAAAAN
A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A A C T G A G T C
A C G T A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C