Information for 2-TCTTTTGGATGC (Motif 2)

A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTTTTGGATGC----
-CCATTGTATGCAAAT
A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

ZBTB26/MA1579.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTTGGATGC
NNNNTTTCTGGAGNN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTTTTGGATGC
-NATTTGCATNN
A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
A C G T G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTTGGATGC
CTCATTTGCATW-
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTTTTGGATGC
TTCATTTGCATAT
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTTTTGGATGC----
-CTTTGTTATGCAAAT
A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCTTTTGGATGC
--ATTTGAATT-
A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTTGGATGC--
TNTAATTTGCATACNA
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTTGGATGC
BTVATTWGCATA-
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTTGGATGC--
TNTAATTTGCATANNN
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A G T C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A