Information for 12-TGTGAGCGATGT (Motif 11)

A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T A G T C A C T G A G T C A C G T A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets165.0 +/- 0.0bp
Average Position of motif in Background149.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAGCGATGT---
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTGAGCGATGT
--TGATKGATGR
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTGAGCGATGT-
NNTGATTGATGNN
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTGAGCGATGT-
-ATGATKGATGRC
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGAGCGATGT
NNNNTTGTGTGCTTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGTGAGCGATGT
--TAATCGATAA
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGTGAGCGATGT
--TAATCGATAA
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGAGCGATGT
NGTCAGCANTTT
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGAGCGATGT
TTTGATTGATGN
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTGAGCGATGT
--TGATTGATGA
A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C G T
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A