Information for 9-TTTGCTAATAGA (Motif 11)

A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background186.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCTAATAGA
TCTTTANTAATANN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTGCTAATAGA
TATGCAAAT---
A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTGCTAATAGA-
--NNCTAATGGNN
A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTGCTAATAGA
TATGCAAAT---
A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTGCTAATAGA
AATATGCAAATT--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTTGCTAATAGA-
TTGTATGCAAATTAGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCTAATAGA-
NNNTTTNTAATACNG
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCTAATAGA
TTATGCAAAT---
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTAATAGA
TTATGCAAATTA-
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTGCTAATAGA
ATTATGCTAATTT-
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G C G T A
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T