Information for 12-GTAACAATAGCA (Motif 13)

A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTAACAATAGCA
-GAACAATGG--
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTAACAATAGCA
-NAACAAT----
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GTAACAATAGCA-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SOX15/MA1152.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTAACAATAGCA
AAAACAATAG--
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTAACAATAGCA
AGAACAATGG--
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTAACAATAGCA
VVRRAACAATGG--
A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTAACAATAGCA--
AATGAACAATGGAATT
A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTAACAATAGCA
--AACAAT----
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTAACAATAGCA--
TAGTGAACAATAGATTT
A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTAACAATAGCA-----
--AACAATAACATTGTT
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T