Information for 18-CATCTGGCACTT (Motif 18)

A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TWIST1/MA1123.2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CATCTGGCACTT
NNACATCTGGNNN--
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGGCACTT
NNCATCTGNN----
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------CATCTGGCACTT
CCNNACCATCTGGCCTN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CATCTGGCACTT
AACATCTGGA----
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CATCTGGCACTT
NNCCATCTGTNNN--
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATCTGGCACTT
GGTCTGGCAT--
A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATCTGGCACTT
SMCATCTGKH----
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGGCACTT
GCCAGCTGBTNB--
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CATCTGGCACTT
TGTCTGDCACCT
A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NEUROD1/MA1109.1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CATCTGGCACTT
NNNCCATCTGTNN---
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T A C G T A C G T