Information for 4-CCCGAGGAGAGA (Motif 8)

A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGAGAGA
ATTGCCTGAGGCGAA-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGAGAGA
GGGCCTGAGGCGGG-
A C G T A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G A C G T

EBF1/MA0154.4/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGAGAGA
AGTCCCCAGGGGACT
A C G T A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGAGAGA
ATTCCCTGAGGGGAA-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGAGAGA
ATTGCCTGAGGCAAT-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCCGAGGAGAGA
NNGCCTGAGGCANN-
A C G T A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T

TFAP2E/MA1569.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCGAGGAGAGA
NGCCTGAGGCN---
A C G T A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCGAGGAGAGA
GCCTCAGGGCAT-
A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCGAGGAGAGA
SCCTSAGGSCAW-
A C G T A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCGAGGAGAGA
----AGGTGTGA
A G T C A G T C A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A