Information for 11-GAAATAGTCCAT (Motif 11)

A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAATAGTCCAT---
GGCAAAAGTCCAATAA
A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAATAGTCCAT--
TTATTAGTACATAN
A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PRDM4/MA1647.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAATAGTCCAT
NAGAAACAGNN---
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAAATAGTCCAT
CCAAAAATAG-----
A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAAATAGTCCAT
---AAAGTTCAT
A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAATAGTCCAT-
TCCAAAGTCCAAA
A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAATAGTCCAT-
TCCAAAGTCCAGA
A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAATAGTCCAT
DCYAAAAATAGM----
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAATAGTCCAT
KCCAAAAATAGC----
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAATAGTCCAT---
GATAATTAATCCCTCTT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T