Information for 2-GCTATCTGCG (Motif 2)

A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G C G T A A C G T C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTATCTGCG-
NNNCCATCTGTNN
A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTATCTGCG--
NNCCATCTGTNNN
A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTATCTGCG
YSTTATCT---
A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTATCTGCG
GCCATCTGTT
A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCTATCTGCG--
NNNCTGATATCTCNNNN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTATCTGCG-
VCCTCTCTGDDY
A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTATCTGCG
NNCATCTGNN
A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

GATA5/MA0766.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTATCTGCG
NCCTTATCTG--
A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T A G T C T A G C G C A T C G A T C G T A A C G T A G T C C G A T T A C G A C G T A C G T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTATCTGCG
NNTCTTATCT---
A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C T G T C G A A C G T A G T C A G C T C G A T C G T A A C G T A G T C C G A T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTATCTGCG--
ACTTGCTACCTACACC
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C