Information for 12-GGTTGAGGACAC (Motif 13)

A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A G T C C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.034e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background108.0 +/- 73.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGTTGAGGACAC
---TRAGGTCA-
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGTTGAGGACAC
----AAGGTCAC
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTTGAGGACAC
AGGTCAAGGTCA-
A C G T A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTGAGGACAC
NGATGACGTCAT
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTTGAGGACAC
AGGTCAAGGTCA-
A C G T A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTTGAGGACAC
NGRTGACGTCAY
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTTGAGGACAC
NRRTGACGTCAT
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

CREB1/MA0018.4/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTTGAGGACAC-
TTATGATGTCATA
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T
G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTTGAGGACAC
NBYCAAGGTCAC
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

ATF2/MA1632.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTTGAGGACAC-
AAATGAGGTCATT
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T