| p-value: | 1e-3 |
| log p-value: | -7.950e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 16.4 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 177.0 +/- 0.0bp |
| Average Position of motif in Background | 118.8 +/- 53.8bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAGTTCAAGT--- -AGGTCAAGGTCA |
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NR1I3/MA1534.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAGTTCAAGT AAAGTTCAT-- |
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NR6A1/MA1541.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGTTCAAGT---- GTCAAGTTCAAGGTCAA |
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|
PH0171.1_Nkx2-1/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAGTTCAAGT------ AANTTCAAGTGGCTTN |
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|
NKX2-8/MA0673.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TAGTTCAAGT-- ---NTCAAGTGG |
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|
|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAGTTCAAGT CAAAGKTCAA-- |
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|
|
ZBTB12/MA1649.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAGTTCAAGT- NNGTTCCAGNN |
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|
|
VDR/MA0693.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAGTTCAAGT TGAGTTCA--- |
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|
|
PH0114.1_Nkx2-5/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAGTTCAAGT------ AAATTCAAGTGGNTTN |
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|
NKX2-3/MA0672.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TAGTTCAAGT--- ---NTCAAGTGGN |
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