Information for 1-AGCACATT (Motif 3)

C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A T C G A C G T A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.950
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif5232.6
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets78.4 +/- 64.8bp
Average Position of motif in Background96.2 +/- 137.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGCACATT-
CGTCAGCANTTTT
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T
G A T C T C A G A G C T G T A C C T G A A C T G A G T C C T G A G A T C C G A T G C A T G C A T G A C T

PB0041.1_Mafb_1/Jaspar

Match Rank:2
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------AGCACATT-
NCTANGTCAGCAAATTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

ZNF317/MA1593.1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGCACATT
TAACAGCAGACT
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AGCACATT-
HWWGTCAGCAWWTTT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGCACATT--
AGCTCATTAT
C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGCACATT--
AAGTCAGCANTTTTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGCACATT
NGTCAGCANTTT
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

TEAD2/MA1121.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCACATT------
-TCACATTCCAGCC
C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

MXI1/MA1108.2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCACATT--
GACACATGGC
C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCACATT-----
CGAAGCACACAAAATA
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A