| p-value: | 1e-3 |
| log p-value: | -8.525e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 9.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 160.0 +/- 0.0bp |
| Average Position of motif in Background | 115.8 +/- 45.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGTAGGCCAT--- AAWCTAGGTCARDNN |
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RORC/MA1151.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGTAGGCCAT ATAAGTAGGTCA- |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TGTAGGCCAT -CTAGGCCT- |
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|
RORB/MA1150.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGTAGGCCAT AATTAGGTCAC |
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|
PB0094.1_Zfp128_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TGTAGGCCAT--- TTNGGGTACGCCNNANN |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGTAGGCCAT AAYTAGGTCA- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGTAGGCCAT AAYTAGGTCA- |
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|
|
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TGTAGGCCAT -CNAGGCCT- |
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|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGTAGGCCAT ATCAAGGTCA- |
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|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TGTAGGCCAT TATAAGTAGGTCAA |
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