Information for 2-CGCCTGTAGG (Motif 10)

A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
p-value:1e-4
log p-value:-9.833e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background156.7 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGTAGG
ATGCACCTGTCAT
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

SCRT1/MA0743.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTGTAGG---
NNCCACCTGTTGAANN
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C G T A T C G A G T A C G T A C C T G A G A T C G A T C C G A T T A C G G A C T C A G T C T A G T G C A G C T A G A C T G C A T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCCTGTAGG
CACCTGTTGC
A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C

SCRT2/MA0744.2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTGTAGG---
NNNCACCTGTTGCTNN
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C G T A C T G A G T A C G T A C C T G A G T A C G A T C C G A T A T C G G A C T C A G T C T A G T G A C G C A T A G C T G A C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCCTGTAGG--
TGCCCNGGGGCA
A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

SNAI3/MA1559.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTGTAGG
TGCACCTGTT--
A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T A C G T A C G T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGTAGG
ACACACCTGTGC-
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
T C G A T G A C T C G A T G A C C G T A A T G C T A G C A C G T A C T G A G C T A C T G G A T C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGTAGG
NNCACCTGNN--
A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

Rbpjl/MA1621.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCCTGTAGG
CGAACACCTGTCCC
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G
A T G C T C A G T G C A T C G A G T A C C T G A A T G C T A G C A G C T A T C G A G C T A T G C G A T C A G T C

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCTGTAGG--
TGCCCTNGGGCA
A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A