Information for 1-AGGGTGTCACTG (Motif 2)

C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGTCACTG--
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGTCACTG--
AATAGGGTATCATATAT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGTCACTG--
GATAGGGTATCACTAAT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGTCACTG--
GATAGGGTATCACTAAT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGGTGTCACTG
-AGGTGTCA---
C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGTCACTG--
AATGGGGTATCACGTTT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGTCACTG--
AATAGGGTATCAATTAT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

TBX3/MA1566.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGGTGTCACTG
GAGGTGTGAA--
C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGGTGTCACTG
-VGCTGWCAVB-
C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGGTGTCACTG--
GATGGGGTATCATTTTT
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T