Information for 13-GAGTGAACCT (Motif 28)

A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.321e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif30.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background115.1 +/- 84.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAACCT
GTGAGTGNAC--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GAGTGAACCT-
---TGAACTCA
A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGAACCT--
NTTGATTGAATCWGV
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGTGAACCT-
--ATGAACTTT
A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGTGAACCT--
--TTGAMCTTTG
A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAACCT
GAAAGTGAAAGT
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGTGAACCT
AAGGTGTGAA---
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAGTGAACCT-
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTGAACCT
--NTGACCTN
A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAACCT
GAGCGTGACCCC
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C