Information for 5-CCTTTCTTCAGA (Motif 5)

A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets176.0 +/- 0.0bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTCTTCAGA
NNGCACCTTTCTCC---
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTCTTCAGA---
CATTTCCTGAGAAAT
A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTTTCTTCAGA
YCTTTGTTCC--
A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTTTCTTCAGA-
-ANTTCTNNAGAA
A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C G T
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTCTTCAGA-
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTCTTCAGA
NCCTTTGTTC---
A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTTTCTTCAGA-
---TTCCKNAGAA
A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTCTTCAGA-
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTTTCTTCAGA
NCCATTGTTC---
A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTTCTTCAGA
CCTTTGTTTT--
A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C T G C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T