Information for 5-CCCTCAACAT (Motif 8)

A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.531e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif50.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets133.0 +/- 0.0bp
Average Position of motif in Background107.9 +/- 75.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCTCAACAT
ACCACTCAAAA-
A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAACAT
AGCCACTCAAG--
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCCTCAACAT
TAACCACTCAAGAA
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCAACAT
NSCACTYVAV--
A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAACAT
AASCACTCAA---
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAACAT
AAAACCTCAAAT-
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T

ZNF282/MA1154.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTCAACAT---
CTTTCCCACAACACGAC
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A T G C G C A T C G A T C A G T A T G C A G T C A T G C G T C A G A T C C G T A C G T A A T G C G T C A A G T C C A T G C T G A A T G C

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAACAT----
AACACCAAAACAAAGGA
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

FOXO4/MA0848.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCTCAACAT
--GTAAACA-
A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCTCAACAT
--GTAAACAA
A G T C A G T C A G T C A C G T A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A