Information for 5-GTGAGGTTTTTC (Motif 5)

A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A C G T A C G T A A G T C A G T C A C G T A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.0 +/- 0.0bp
Average Position of motif in Background186.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGGTTTTTC
NNTTGAGGTTNN--
A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGGTTTTTC
NNTGTGGTTT---
A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGAGGTTTTTC
TTGCGGTTT---
A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGGTTTTTC
NNGTANTGTTTTNC
A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGAGGTTTTTC
CTGTGGTTTN--
A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGAGGTTTTTC
GTCTGTGGTTT---
A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGGTTTTTC
NNHTGTGGTTWN--
A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGAGGTTTTTC
GCTGTGGTTT---
A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGAGGTTTTTC
-TGACGT-----
A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGGTTTTTC
NNTGACCTTTNN-
A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A G T C
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A A C G T