Information for 5-AAAAGTAGGTGC (Motif 5)

C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAAAGTAGGTGC
-ATAGTAGGTG-
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAAAGTAGGTGC--
-NNGGCAGGTGCNN
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAAGTAGGTGC--
-NNGGCAGGTGCNN
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAAAGTAGGTGC-
---RGCAGGTGYA
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAAGTAGGTGC--
--SDGCAGGTGCNS
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAGGTGC-
TATAAGTAGGTCAA
A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAAGTAGGTGC-
--NNGCAGGTGNN
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAAGTAGGTGC-
--NNGCAGGTGNN
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

SNAI1/MA1558.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAAAGTAGGTGC-
---GGCAGGTGCA
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

SNAI3/MA1559.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAAAGTAGGTGC-
---AACAGGTGCA
C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A