Information for 18-TTGCAGGTCA (Motif 26)

A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.427e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif27.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets16.0 +/- 0.0bp
Average Position of motif in Background110.7 +/- 69.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTGCAGGTCA
ATCAAGGTCA
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TTGCAGGTCA
----AGGTCA
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTGCAGGTCA-
-TCAAGGTCAT
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTGCAGGTCA-
---GAGGTCAT
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTGCAGGTCA-
-TCAAGGTCAN
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAGGTCA-
NBYCAAGGTCAC
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTGCAGGTCA
--TRAGGTCA
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTGCAGGTCA-
---AAGGTCAC
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTGCAGGTCA-
--CGAGGTCAC
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

NR2F2/MA1111.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGCAGGTCA--
-CAAAGGTCAAA
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T
A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A