Information for 6-CTCATATAGG (Motif 23)

A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.776e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets150.0 +/- 0.0bp
Average Position of motif in Background91.9 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCATATAGG-
CCTTTTATAGNC
A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCATATAGG----
TGACCATATATGGTCA
A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCATATAGG--
AAAGCTCGTAAAATTT
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTCATATAGG
NNNNNNCTTTTATAN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTCATATAGG
NNNNNNCTTTTATAN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCATATAGG
CCYMATAAAA-
A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCATATAGG
CCAAAAATAG-
A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCATATAGG
-ACATATGG-
A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCATATAGG
CCATATATGG-
A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCATATAGG--
AAACCTCGTAAAATTT
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T