| p-value: | 1e-4 |
| log p-value: | -1.023e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 54.0 +/- 0.0bp |
| Average Position of motif in Background | 165.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAAAGCGACC- ACAAAGGNBCCT |
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SOX10/MA0442.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CAAAGCGACC AAAACAAAGAA--- |
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TCF7/MA0769.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CAAAGCGACC ANATCAAAGNN--- |
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PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CAAAGCGACC-- CCGCATAGCAACGGA |
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|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CAAAGCGACC-- TACCATAGCAACGGT |
|
|
|
RFX1/MA0509.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAAAGCGACC- TNCCATAGCAACNN |
|
|
|
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CAAAGCGACC ACATCAAAGG---- |
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|
|
TCF7L2/MA0523.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CAAAGCGACC AAAGATCAAAGGAA-- |
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|
|
RFX3/MA0798.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAAAGCGACC- TNCCATAGCAACNN |
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|
SOX4/MA0867.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CAAAGCGACC GAACAAAGGG--- |
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