Information for 10-ATTTATACTC (Motif 16)

C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T
p-value:1e-3
log p-value:-7.779e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets156.0 +/- 0.0bp
Average Position of motif in Background87.8 +/- 72.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------ATTTATACTC
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------ATTTATACTC
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ATTTATACTC
AAATGATTTATGGCT
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATACTC
TCTATTTATAGN-
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTTATACTC
NNTGATTTATGNN-
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATTTATACTC--
ATGGGATATATCCGCCT
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATACTC
GCTATTTATAGC-
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATACTC
DGWTTTATGRCN
A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATACTC
TGATTTATGGCC
A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTTATACTC
ATGAATATTC
C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C