Information for 14-GGGGTTTTCA (Motif 20)

A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.436e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif55.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background103.3 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGGGTTTTCA
GGGGATTTCC
A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGGTTTTCA
GGGGATTTCC
A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGGTTTTCA
GGGAATTTCC
A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTTTCA-
NGGGGATTTCCC
A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MZF1/MA0056.2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGGTTTTCA
NNNTGGGGATTNN-
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGGTTTTCA
GGGAATTTCC
A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGTTTTCA
NNNATTGGGGGTNTCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGGTTTTCA--
--TGGTTTCAGT
A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTTTTCA
NNTGTGGTTT---
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTTTTCA
TTGCGGTTT---
A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A G T C C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T