Information for 5-TCATGGCCATCT (Motif 5)

A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCATGGCCATCT
AAGTTCAAGGTCAGC-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCATGGCCATCT----
---NNNCCATCTGTNN
A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TCATGGCCATCT---
-----GCCATCTGTT
A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCATGGCCATCT-----
----NNCCATCTGTNNN
A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCATGGCCATCT
NTCAAGGTCA---
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCATGGCCATCT
BTCAAGGTCA---
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCATGGCCATCT------
-CCNNACCATCTGGCCTN
A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NR5A1/MA1540.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATGGCCATCT
GTCAAGGTCAC--
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATGGCCATCT
TCAAGGTCATA-
A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

HAND2/MA1638.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCATGGCCATCT---
-----NNCATCTGNN
A C G T A G T C C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T