Information for 2-CATCTGCGTA (Motif 7)

A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C T G A G T C C G T A A C T G C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background193.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCGTA
NNCATCTGNN--
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CATCTGCGTA
NNAACATCTGTNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CATCTGCGTA
NNCCATCTGTNNN
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCGTA
CGCAGCTGCG--
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

NHLH2/MA1529.1/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CATCTGCGTA--
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CATCTGCGTA
NNNCCATCTGTNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCGTA
SMCATCTGKH--
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATCTGCGTA
NNACATCTGGNNN
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCGTA
ACCATCTGTT--
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCGTA
NVCAGCTGBBNN
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C