Information for 24-ATAAAACCATGA (Motif 24)

C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T C G T A A C G T
p-value:1e-3
log p-value:-8.238e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background118.2 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATAAAACCATGA
CTACCAATAAAATTCT--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATAAAACCATGA-
-AAAAACCATTAC
C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T
A C G T C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C

HOXA13/MA0650.2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAAAACCATGA
CCCAATAAAAC-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C A C G T A C G T A C G T A C G T A C G T

CDX4/MA1473.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAAAACCATGA
GGCAATAAAAC-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACCATGA
GTCATAAAAN-----
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATAAAACCATGA-
---AAACMATTAN
C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

CDX1/MA0878.2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAAAACCATGA
GGCCATAAAAC-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T

Prdm15/MA1616.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATAAAACCATGA--
AGGAAAACCTGGAGC
A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

HOXD13/MA0909.2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATAAAACCATGA
CCCAATAAAAC-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T A C G T A C G T A C G T A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATAAAACCATGA
GCAATAAAAC-----
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C G T A C T G C G T A
T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C A C G T A C G T A C G T A C G T A C G T