Information for 10-ACATGAATTATG (Motif 12)

C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background153.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ACATGAATTATG---
-CATTAATTATTCAT
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ACATGAATTATG---
CTCATTAATTATGCAT
A C G T C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACATGAATTATG---
AAATGATTTATGGCT
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

PBX2/MA1113.2/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACATGAATTATG--
-NNTGATTTATGNN
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T
A C G T C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACATGAATTATG---
WYATGCATWATGCAT
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACATGAATTATG---
TCATGAATWATTCAT
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ACATGAATTATG---
---TGAATTATGCAT
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACATGAATTATG---
NNCTNAATTATGANN
C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

POU4F2/MA0683.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACATGAATTATG---
CTCATTAATTATGCAT
A C G T C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ACATGAATTATG
NNTNTCATGAATGT--
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T