Information for 7-CTCACACAGC (Motif 16)

A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background85.3 +/- 81.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTCACACAGC
----CACAGN
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MAFK/MA0496.3/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTCACACAGC---
TGCTGACTCAGCAAT
A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T
G C A T T A C G T G A C G C A T A C T G T G C A A T G C G C A T G T A C C G T A A C T G T A G C G T C A G C T A G C A T

BACH1/MA1633.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCACACAGC--
GATGACTCAGCAA
A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T
A T C G T C G A A G C T A C T G T G C A T A G C C G A T G T A C C T G A A C T G T A G C G C T A G C T A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCACACAGC
TGCTGASTCAGC
A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCACACAGC
-TCACACCT-
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCACACAGC------
-CCACACAGCAGGAGA
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

TBX3/MA1566.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCACACAGC
NTCACACCTN
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C
A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCACACAGC
-TCACACCT-
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCACACAGC------
-GAGCACAGCAGGACA
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCACACAGC------
-CCACACAGCAGGAGA
A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A