Information for 5-GGCCCTAT (Motif 17)

A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C T G A C T G A G T C A G T C
p-value:1e-2
log p-value:-6.186e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif192.1
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background99.2 +/- 71.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGCCCTAT-----
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCTAT--
NNTGGCCCCAGNN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCTAT-
KGGCCYCWTD
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

PLAGL2/MA1548.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGCCCTAT
NGGGGGCCCN--
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T
C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCTAT
CTAGGCCT---
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCCCTAT---
-GCCATATGGT
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCCCTAT
GTGGGCCCCA-
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCCTAT----
GGCTCYAKCAYC
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTAT--
AGGTCTCTAACC
A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGCCCTAT---
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G