Information for 15-GCCAAGTACT (Motif 33)

A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.255e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif32.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background84.5 +/- 106.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGTACT------
TTCNAAGTACTTNNNNN
A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAGTACT
NNTGCCAAGNN--
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCAAGTACT------
TACTAAGTACTTAAATG
A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGTACT
CGTGCCAAG----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGTACT-----
CNTTAAGTACTTAANG
A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGTACT
GGTGCCAAGT---
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCAAGTACT-----
NATTTAAGTACTTNAAA
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGTACT
AAGGCAAGTGT-
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCAAGTACT---
---AAGCACTTAA
A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

LHX2/MA0700.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCAAGTACT
AACCAATTAAT
A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A G T C A C G T
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T