Information for 13-GCAAGCTGTC (Motif 26)

A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.678e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background128.6 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGCTGTC------
NNNCAGCTGTCAATATN
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCTGTC-----
AACTAGCTGTCAATAC
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCTGTC-----
AACGAGCTGTCAATAC
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCAAGCTGTC-
-CCAGCTGTTN
A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCAAGCTGTC--
----GCTGTCAA
A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCTGTC-----
AAAGACCTGTCAATCC
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCAAGCTGTC
--CAGCTGTT
A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

TGIF1/MA0796.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGCTGTC-
TGACAGCTGTCA
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGCTGTC
NNGCAGCTGTT
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCAAGCTGTC
GCCATCTGTT
A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T