Information for 2-CATAAAAAACAC (Motif 5)

A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background193.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF384/MA1125.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATAAAAAACAC
TTTAAAAAAAAA-
A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CATAAAAAACAC
AGAGCCATAAAATTCG-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATAAAAAACAC
GTCATAAAAN----
A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATAAAAAACAC---
AACAAACAACAAGAG
A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATAAAAAACAC
GCTAARTAAACA-
A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CATAAAAAACAC
NGYCATAAAWCH---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATAAAAAACAC
KGCCATAAAA-----
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CATAAAAAACAC
VGCCATAAAA-----
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CATAAAAAACAC
GGTAATAAAAA----
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATAAAAAACAC-
AAATAAGAAAAAAC
A C G T A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C