Information for 6-GATTGATGTA (Motif 17)

A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C G T A G T C
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background112.8 +/- 93.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GATTGATGTA
NNTGATTGATGNN
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGATGTA-
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----GATTGATGTA---
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GATTGATGTA
TTTGATTGATGN-
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGATGTA-
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GATTGATGTA
TGATKGATGR-
A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GATTGATGTA
TGATTGATGA-
A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GATTGATGTA
ATGATKGATGRC
A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GATTGATGTA-
-ATTGATTYND
A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:10
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GATTGATGTA-
AAATGATTTATGGCT
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T