Information for 1-TGACTGTCGA (Motif 2)

A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.037e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTCGA-
BTGABTGACAGS
A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGACTGTCGA
--GCTGTCAA
A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGACTGTCGA
--CCTGTCAA
A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTCGA
TTGACTTTT--
A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGACTGTCGA
---NTGTCAN
A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTCGA
TTGATTGN---
A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTCGA
GTGAGTGNAC-
A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGACTGTCGA
--GCTGTG--
A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGACTGTCGA
NCGTGACN-----
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGACTGTCGA
NNTTGAGTGNN--
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C T G C G T A
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T