Information for 3-TGTAAGCCAA (Motif 7)

A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.352e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background114.5 +/- 70.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTAAGCCAA-
--CGTGCCAAG
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTAAGCCAA---
TTNGGGTACGCCNNANN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTAAGCCAA
-ATAATCCC-
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGTAAGCCAA
--TAATCCCN
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PB0018.1_Foxk1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTAAGCCAA---
AAAATGTAAACAAACAG
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTAAGCCAA----
----AGCCAATCGG
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTAAGCCAA
-AAAAGTCAA
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTAAGCCAA
-CTAATCCC-
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTAAGCCAA
-GTAAACAA-
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGTAAGCCAA--
--GGTGCCAAGT
A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T