Information for 18-CGGCAGCTTG (Motif 36)

A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C T G
p-value:1e-2
log p-value:-6.868e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background97.6 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGCTTG---
CACGGCAGTTGGTNN
A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAGCTTG---
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGGCAGCTTG
---AAGCTTG
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGCTTG
GCCGCCATCTTG
A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTTG-
-CGCAGCTGCG
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T
A C G T A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGCAGCTTG
CAGCAGCTGN
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MYOG/MA0500.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGCAGCTTG--
NNGCAGCTGCNN
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGCAGCTTG-
NNAGCAGCTGCT
A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTTG
-ANCAGCTG-
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTTG--
-AACAGCTGCAG
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G