Information for 12-GCATTTTCCC (Motif 18)

A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.332e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif61.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background94.6 +/- 81.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GCATTTTCCC
---TTTTCCA
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCATTTTCCC--
--ATTTTCCATT
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCATTTTCCC--
--ATTTTCCATT
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCATTTTCCC--
--ATTTTCCATT
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC4/MA1525.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCATTTTCCC--
--ATTTTCCATN
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCATTTTCCC--
--ATTTTCCATT
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCATTTTCCC---
---HTTTCCCASG
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCATTTTCCC
GGGAATTTCC-
A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCATTTTCCC
GGGAATTTCC-
A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCATTTTCCC---
---NNTTCCCANN
A C T G A G T C C G T A A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G