Information for 8-GTAGAAGCTC (Motif 16)

A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background93.5 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTAGAAGCTC
--NGAAGC--
A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTAGAAGCTC
AAACAGAAGCAG
A C G T A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTAGAAGCTC-
----AAGCTTG
A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTAGAAGCTC--
ADGGYAGYAGCATCT
A C G T A C G T A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTAGAAGCTC
-----NGCTN
A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GTAGAAGCTC--
------GCTCCG
A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZSCAN29/MA1602.1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGAAGCTC
NCNGTGTAGACG---
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTAGAAGCTC-
GGGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTAGAAGCTC-
GGGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTAGAAGCTC-
GGGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A