Information for 1-ACATTTCATTGA (Motif 1)

C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T A C T G C G T A C G T A C G T A A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACATTTCATTGA----
-NANTTCATTGAATTA
C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACATTTCATTGA----
NNCATTCATTCATNNN
C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACATTTCATTGA-
---TTTCATTRCC
C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACATTTCATTGA-
---TTTCATKGCC
C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

HOXB13/MA0901.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACATTTCATTGA--
NNATTTTATTGGNN
C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACATTTCATTGA-
TNGAATTTCATTNAN
A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACATTTCATTGA---
NTNAATTTTATTGNATT
A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACATTTCATTGA
CCACATTCCAGG--
A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A
G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACATTTCATTGA--
--NTTTCATTRCHD
C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACATTTCATTGA---
NNANTTTTATTGGNNN
A C G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G