Information for 8-ACTCACAAAGTG (Motif 8)

C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACTCACAAAGTG
-AAAACAAAGAA
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTCACAAAGTG
GTACACTCAC------
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTCACAAAGTG--
-GATACAAAGTATC
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTCACAAAGTG
-VRRACAAWGG-
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

SOX4/MA0867.2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTCACAAAGTG
--GAACAAAGGG
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T A C G T C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTCACAAAGTG
BMRVACAAWGGV
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACTCACAAAGTG----
----ACAAAGGNBCCT
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTCACAAAGTG
AAAAATAACAAACGG
A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACTCACAAAGTG
---RACAAWGG-
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACTCACAAAGTG---
-----TTRAGTGSYK
C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T