Information for 3-CTAGGAAATTAC (Motif 3)

A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.058e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CTAGGAAATTAC-
---GGAAATTCCC
A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTAGGAAATTAC
AACAAGGAAGTAA-
A C G T A C G T A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTAGGAAATTAC-
---GGAAATTCCC
A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAGGAAATTAC---
TATTGGTAATTACCTT
A C G T A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGAAATTAC
NACAGGAAAT---
A C G T A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGAAATTAC---
NTNAGGTAATTACCTT
A C G T A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTAGGAAATTAC
--NDGTAATTAC
A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C
A C G T A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

HOXB7/MA1501.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTAGGAAATTAC-
---GGTAATTAAC
A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T T C A G A C T G A G C T G T C A G T C A A C G T G C A T C T G A T C G A T A G C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTAGGAAATTAC
TTCTTGGAAAN---
A C G T A C G T A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTAGGAAATTAC-
CTACTAGGATGTNNTN
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C