Information for 5-TCGGCCCAGTTA (Motif 7)

A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C G T A C T G A C T G A C T G A G T C A G T C A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCGGCCCAGTTA
--TGCCCAGNHW
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCGGCCCAGTTA
-AGGCCTAG---
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGGCCCAGTTA-
-TGACCTANTTAN
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C G T
A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCGGCCCAGTTA-
-----CTAATTAA
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCGGCCCAGTTA-
----ACCACTTAA
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCGGCCCAGTTA--
----ACTAGTTAAC
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCGGCCCAGTTA-
-----CCAATTAA
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGGCCCAGTTA
BTGACCTAVTTW
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

LHX2/MA0700.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCGGCCCAGTTA--
---AACCAATTAAT
A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCGGCCCAGTTA
NNHYTGACCTAGWTT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T C G T A
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T