Information for 7-AATTATATGGCT (Motif 10)

C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AATTATATGGCT--
NGANTTTTATGGCTCN
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0056.1_Hoxa9/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AATTATATGGCT--
ANTAATTTTATGGCCGN
A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PH0023.1_Dlx4/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AATTATATGGCT
GTCGGTAATTATNGNGN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AATTATATGGCT
NNNGGTAATTATNGNGN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A A C G T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AATTATATGGCT
-GTTTTATGGCC
C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
A C G T T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AATTATATGGCT---
NAATTTTATTACCNNN
A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATTATATGGCT
-NTTTTATGAC-
C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATTATATGGCT
GCAATTAA------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

DLX5/MA1476.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATTATATGGCT
GCAATTAC------
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

CDX4/MA1473.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATTATATGGCT
-GTTTTATTGCC
C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C T G A G T C A C G T
A C G T T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C