Information for 12-TGCCTTTAATGA (Motif 12)

A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-3/MA1530.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
----TTTAATGAN
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

HOXB4/MA1499.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
-----NTAATGAT
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTAATGA
----TTTAAT--
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
-----TTAATTAN
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

HOXC4/MA1504.1/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
-----NTAATGAN
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

HOXD4/MA1507.1/Jaspar

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
-----NTAATGAN
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TGCCTTTAATGA
----GKTAATGR
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TGCCTTTAATGA---
-----ATAATGAGGT
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
-----TTAATTAN
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXA4/MA1496.1/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCCTTTAATGA-
-----NTAATGAC
A C G T A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C