| p-value: | 1e-3 |
| log p-value: | -7.139e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 74.3 |
| Percentage of Background Sequences with motif | 0.08% |
| Average Position of motif in Targets | 5.0 +/- 0.0bp |
| Average Position of motif in Background | 86.7 +/- 63.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAATATACAT GAATATTCAT |
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|
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAATATACAT GHATATKCAT |
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|
|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAATATACAT--- ATGAATATTCATGAG |
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|
|
POU3F1/MA0786.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAATATACAT-- TAATTTGCATAA |
|
|
|
POU1F1/MA0784.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATATACAT--- CTAATTTGCATATT |
|
|
|
POU3F2/MA0787.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAATATACAT-- TAATTTGCATAA |
|
|
|
Foxq1/MA0040.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TAATATACAT-- -AATAAACAATN |
|
|
|
PB0080.1_Tbp_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TAATATACAT--- NANTTATATATAANGN |
|
|
|
PH0144.1_Pou2f2/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAATATACAT---- TNTAATTTGCATANNN |
|
|
|
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAATATACAT----- TNNATTATGCATANNTT |
|
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