Information for 9-TAGTTCAAGT (Motif 31)

A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A
p-value:1e-3
log p-value:-7.950e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background118.8 +/- 53.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAGTTCAAGT---
-AGGTCAAGGTCA
A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTCAAGT
AAAGTTCAT--
A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T

NR6A1/MA1541.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAGTTCAAGT----
GTCAAGTTCAAGGTCAA
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAGTTCAAGT------
AANTTCAAGTGGCTTN
A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TAGTTCAAGT--
---NTCAAGTGG
A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGTTCAAGT
CAAAGKTCAA--
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T

ZBTB12/MA1649.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAGTTCAAGT-
NNGTTCCAGNN
A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

VDR/MA0693.2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGTTCAAGT
TGAGTTCA---
A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAGTTCAAGT------
AAATTCAAGTGGNTTN
A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TAGTTCAAGT---
---NTCAAGTGGN
A C G T C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T