Information for 10-TCTGCACAACAG (Motif 11)

A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPD/MA0836.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTGCACAACAG
TATTGCACAATAT
A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G
C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCACAACAG
NNGTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTGCACAACAG---
ATGTCACAACAACAC
A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCTGCACAACAG----
--CTCACAGCAGGGGG
A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCTGCACAACAG----
AACACCAAAACAAAGGA
A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCACAACAG
NTNTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

CEBPA/MA0102.4/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCTGCACAACAG
TTATTGCACAATAT
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G
C G A T C A G T T C G A G C A T C A G T C A T G G A T C C T G A G A T C G T C A C G T A A G C T G C T A G C A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCACAACAG--
ATTTGCATAACAAAG
A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTGCACAACAG----
-CCACACAGCAGGAGA
A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCTGCACAACAG----
----CACAGCAGGGGG
A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G