Information for 1-ATCGTGTC (Motif 9)

C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A G T C A C T G C G T A A C G T
p-value:1e-2
log p-value:-6.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif105.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background95.6 +/- 67.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ATCGTGTC--
NHGTCGTGAYDN
A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATCGTGTC--
TNTTATCTTATCTT
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCGTGTC----
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATCGTGTC--
---NTGTCAN
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATCGTGTC--
NNNCCATTGTGTNAN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCGTGTC--
--CCTGTCAA
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATCGTGTC----
----TGTCANYT
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATCGTGTC---
GAGCGTGACCCC
A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

TBX3/MA1566.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCGTGTC--
GAGGTGTGAA
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATCGTGTC--
NNGTCGCGTGNCAC
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C