Information for 1-GTTGATTGACAC (Motif 1)

A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTTGATTGACAC-
-BTGABTGACAGS
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GTTGATTGACAC-
-NTGATTGACAGN
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTTGATTGACAC---
TTTGAGTGACAGCTA
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTGATTGACAC
-TTGATTGN---
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GTTGATTGACAC--
--TGAGTGACAGSC
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTTGATTGACAC----
GGGTGAGTGACAGGCGG
A C G T A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTTGATTGACAC-
NNNNGTTGATTGGGTCG
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTGATTGACAC
TTTGATTGATGN
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTTGATTGACAC-
-RTGATTKATRGN
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTTGATTGACAC
-----TTGACAG
A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G