Information for 21-ACTCACTCTGAC (Motif 20)

C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTCACTCTGAC
GTACACTCAC------
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTCACTCTGAC-
NAGGTCACNNTGACC
A C G T A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTCACTCTGAC---
NAGTTTCABTHTGACTNW
A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

ZSCAN4/MA1155.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACTCACTCTGAC--
TGCACACACTGAAAA
A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACTCACTCTGAC-
-VCCTCTCTGDDY
C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T
A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACTCACTCTGAC--
CTTTCANTATGACTV
A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

ESR1/MA0112.3/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACTCACTCTGAC---
AAGGTCACGGTGACCTG
A C G T A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTCACTCTGAC--
AGGNCANNGTGACCT
A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACTCACTCTGAC
MRSCACTYAA--
C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTCACTCTGAC
CACTTCCTCT---
A C G T C G T A A G T C A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C T G C G T A A G T C
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T