Information for 3-TGCCTGTCTAAG (Motif 6)

A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCCTGTCTAAG
--GCTGTCAA--
A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGCCTGTCTAAG
--CCTGTCAA--
A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGTCTAAG-
AAGCACCTGTCAATAT
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGTCTAAG-
AATTACCTGTCAATAC
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGCCTGTCTAAG
--GCTGTG----
A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTGTCTAAG
NCTTCCTGTTNN--
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
T C G A A G T C G C A T A G C T A G T C G A T C G C A T A T C G A G C T A C G T A G C T A G T C A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCCTGTCTAAG-
-GNCTATAAAAGG
A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C G T
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCCTGTCTAAG
---TWGTCTGV-
A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

ETV1/MA0761.2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTGTCTAAG
NNCACTTCCTGTNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
A G C T A G C T G A T C C T G A A G T C C G A T A C G T G T A C T G A C A C G T A T C G A G C T A G C T G A C T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTGTCTAAG
ACTTCCTGTT----
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T