| p-value: | 1e-4 |
| log p-value: | -1.024e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 67.0 +/- 0.0bp |
| Average Position of motif in Background | 149.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACACTCG CCAGACRSVB- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACACTCG CCAGACAG--- |
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PB0060.1_Smad3_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CAGACACTCG- CAAATCCAGACATCACA |
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|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACACTCG BCAGACWA--- |
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|
PB0130.1_Gm397_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CAGACACTCG- AGCGGCACACACGCAA |
|
|
|
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CAGACACTCG- -MRSCACTYAA |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGACACTCG- -AASCACTCAA |
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|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGACACTCG TCTAGACA---- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAGACACTCG-- --RSCACTYRAG |
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Nkx2-5(var.2)/MA0503.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGACACTCG-- -AGCCACTCAAG |
|
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