| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 102.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.86 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA- -WAABTAGGTCAV |
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|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 2 |
| Score: | 0.84 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA --AAYTAGGTCA |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.84 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA --AAYTAGGTCA |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.82 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA- --AATTAGGTCAC |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.82 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA---- -AAWCTAGGTCARDNN |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.81 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAAATTAGGTCA- TATAAGTAGGTCAA |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.81 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA ATAAGTAGGTCA |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA --ATCAAGGTCA |
|
|
|
ATF2/MA1632.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAAATTAGGTCA-- -AAATGAGGTCATT |
|
|
|
PH0058.1_Hoxb3/Jaspar
| Match Rank: | 10 |
| Score: | 0.70 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----CAAATTAGGTCA TNNNACTAATTAGNTCA |
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