Information for 13-GCCAAAAGAAGC (Motif 12)

A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAAGAAGC---
TGCCAAAATAAACANN
A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCCAAAAGAAGC--
--AAACAGAAGCAG
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCAAAAGAAGC
GCTAAAAATAGC
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAGAAGC
CGTGCCAAG------
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCAAAAGAAGC
KCCAAAAATAGC
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCAAAAGAAGC
------NGAAGC
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAGAAGC
GGTGCCAAGT-----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAGAAGC-
ATGCTAAAAATAGAA
A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCAAAAGAAGC
DCYAAAAATAGM
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCAAAAGAAGC
-CCATATATGG-
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T