Information for 14-GAATGATAGA (Motif 26)

A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C G T A G T C C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.501e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background96.2 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAATGATAGA----
--ATGATKGATGRC
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

ZNF24/MA1124.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAATGATAGA---
GAATGAATGAATG
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAATGATAGA--
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAATGATAGA---
---TGATKGATGR
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAATGATAGA---
-TTTGATTGATGN
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAATGATAGA----
--RTGATTKATRGN
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

PBX3/MA1114.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAATGATAGA---
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAATGATAGA
NTGATTGACAGN
A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAATGATAGA--
-NTTGATACATT
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAATGATAGA----
-NNTGATTGATGNN
A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C