Information for 12-AACTCTATAAAA (Motif 13)

C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C G T
p-value:1e-4
log p-value:-9.944e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets161.0 +/- 0.0bp
Average Position of motif in Background108.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AACTCTATAAAA-------
----GTATAAAAGGCGGGG
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AACTCTATAAAA-------
----GTATAAAAGGCGGGG
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AACTCTATAAAA----
CTACCAATAAAATTCT
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AACTCTATAAAA----
AACCCAATAAAATTCG
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AACTCTATAAAA--
--GNCTATAAAAGG
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXB13/MA0901.2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AACTCTATAAAA---
-AACCAATAAAATTT
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACTCTATAAAA-----
AATGCAATAAAATTTAT
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AACTCTATAAAA
--CCYMATAAAA
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AACTCTATAAAA-
--CCCAATAAAAC
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACTCTATAAAA
--NGCAATTAAA
C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A