Information for 14-AGGACTAGCACA (Motif 16)

C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C T G A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.121e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets142.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGACTAGCACA
AGGCCTNG----
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGACTAGCACA
AGGCCTAG----
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGACTAGCACA
-GGATTAGC---
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGACTAGCACA-------
---CGAAGCACACAAAATA
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGACTAGCACA
AAGGGATTAGAA--
A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGACTAGCACA-
---CCAGGAACAG
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGACTAGCACA---
NGNTCTAGAACCNGV
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGACTAGCACA
VRGGATTARN---
A C G T C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGACTAGCACA----
NNGATCTAGAACCTNNN
A C G T C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PITX1/MA0682.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGACTAGCACA
NGGATTAN----
C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A A G T C C G T A
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T