Information for 8-CCTAGAGTGC (Motif 30)

A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A G T C A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.081e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background44.2 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCTAGAGTGC-
-BTBRAGTGSN
A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCTAGAGTGC-
-CTYRAGTGSY
A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTAGAGTGC--
-CTTGAGTGGCT
A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCTAGAGTGC--
--TTGAGTGSTT
A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTAGAGTGC-
NNTTGAGTGNN
A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTAGAGTGC--
--TTRAGTGSYK
A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGAGTGC-
NNNACCGAGAGTNNN
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

BCL6/MA0463.2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGAGTGC--
NATTCCTCGAAAGCAN
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
G T C A C T G A G C A T G A C T T G A C G A T C C G A T T G A C T C A G C G T A T G C A C G T A C A T G G A T C C T G A C G A T

NKX2-2/MA1645.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGAGTGC---
NNNTTGAGTGGNNN
A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGAGTGC-
GNNACCGAGAATNNN
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T