Information for 4-AGGCTGGTCACG (Motif 4)

C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGGCTGGTCACG---
---NNGGTCACGCTC
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

ZNF341/MA1655.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTGGTCACG
NNGGCTGTTCCN-
A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGCTGGTCACG-
-----AGTCACGC
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

TFEC/MA0871.2/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGGCTGGTCACG----
-----NGTCACGTGNN
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGCTGGTCACG--
CGCGCCGGGTCACGTA
A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGCTGGTCACG---
---CCGGTCACGTGA
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGCTGGTCACG
WDNCTGGGCA--
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGCTGGTCACG--
AGAGCGGGGTCAAGTA
A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AGGCTGGTCACG---
-----GGTCACGTGC
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGGCTGGTCACG
----AGGTCA--
C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C T G
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T