Information for 25-AAATCATTTCGT (Motif 23)

C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AAATCATTTCGT
AAGGCGAAATCATCGCA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAATCATTTCGT
-AATTATT----
C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAATCATTTCGT
AAAAACCATTAC--
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AAATCATTTCGT
NNCCATAAATCATNN---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATCATTTCGT
TAATCAATTA--
C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAATCATTTCGT
GTCATAAATCATT----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAATCATTTCGT
AGGGAAGTCATTTCT-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T

GFI1/MA0038.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATCATTTCGT
CAAATCACTGCA-
A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAATCATTTCGT
HNRAATCAAT----
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAATCATTTCGT
AAATCACTGC--
C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C T G A C G T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T