Information for 6-AGCTAGTTAAAA (Motif 8)

C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background100.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AGCTAGTTAAAA--
GAAAACTAGTTAACATC
A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAGTTAAAA---
ANNNCTAGTTAACNGNN
A C G T A C G T C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGCTAGTTAAAA
-ACTAGTTAAC-
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGCTAGTTAAAA
--CTAATTAA--
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T

ARGFX/MA1463.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCTAGTTAAAA
-TCTAATTAAA-
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
A C G T C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCTAGTTAAAA
-GCTCGTAAAAA
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCTAGTTAAAA
AGCTCATTAT--
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

LMX1B/MA0703.2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCTAGTTAAAA-
--TTAATTAAANT
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTAGTTAAAA
-NCTAATTAANN
C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A
A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCTAGTTAAAA--
AAAGCTCGTAAAATTT
A C G T A C G T C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T