Information for 7-CTTCCAAGCAGA (Motif 9)

A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background149.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTTCCAAGCAGA
TTTCCCAGAAN-
A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T

Stat5a/MA1624.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTCCAAGCAGA
TTTCCAAGAAAT
A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTTCCAAGCAGA
ATTTCCAAGAA--
A C G T A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

Stat5b/MA1625.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTTCCAAGCAGA-
CATTTCCCAGAAATC
A C G T A C G T A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTTCCAAGCAGA
NNCTTCCNGGAAGN
A C G T A C G T A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCAAGCAGA
NNTGCCAAGNN--
A C G T A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTCCAAGCAGA
-AGCCAATCAGA
A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTCCAAGCAGA
NTTTCCNGGAAA-
A C G T A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T

NFYA/MA0060.3/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTCCAAGCAGA
-AACCAATCAGA
A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCAAGCAGA
NNNTTTCCTGGAAA-
A C G T A C G T A C G T A G T C A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T