Information for 12-GAATCAAGCC (Motif 31)

A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.367e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background71.3 +/- 142.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAATCAAGCC
CCAATCAA---
A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATCAAGCC
HNRAATCAAT--
A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GAATCAAGCC--
CGACCCAATCAACGGTG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAATCAAGCC--
--ATCACCCCAT
A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAATCAAGCC----
GAAGATCAATCACTAA
A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAATCAAGCC--
--ATCACCCCAT
A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAATCAAGCC----
GAAGATCAATCACTTA
A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAATCAAGCC-
AAGGCGAAATCATCGCA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GAATCAAGCC
TAAYCYAATCAA---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C
G C A T T C G A C T G A G A T C A G T C G A T C G T C A G T C A A C G T A G T C C G T A C T G A A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAATCAAGCC-----
NNNAATTAATCCCCNCN
A C G T A C G T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T