| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 182.0 +/- 0.0bp |
| Average Position of motif in Background | 54.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA9/MA0594.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GCATTATGAC NNTTTACGAC |
|
|
|
PH0065.1_Hoxc10/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCATTATGAC---- ANNTTTTACGACNTNN |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GCATTATGAC- GTTTTATGGCC |
|
|
|
PITX2/MA1547.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GCATTATGAC GGGATTAN--- |
|
|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCATTATGAC---- NNGTTTTACGACTTTA |
|
|
|
POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GCATTATGAC NNCTCATTAT--- |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GCATTATGAC NTTTTATGAC |
|
|
|
CDX4/MA1473.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GCATTATGAC- GTTTTATTGCC |
|
|
|
GSC2/MA0891.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCATTATGAC GNGGATTAGN-- |
|
|
|
GSC/MA0648.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCATTATGAC NNGGATTAGN-- |
|
|
|