Information for 9-TCAATGATCC (Motif 16)

A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A
p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background101.1 +/- 88.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TCAATGATCC-
TCAATGACCTA
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TCAATGATCC-
---ATAATCCC
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TCAATGATCC-
NAGGTCAATGACCTC
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCAATGATCC-
GGGGTCAATGACCTN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCAATGATCC
RRTCAATA----
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCAATGATCC-
TAATTCAATGAAGTG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCAATGATCC--
ATGGTTCAATAATTTTG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAATGATCC-
AGGTCANTGACCTN
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCAATGATCC------
-CNATAATCCGNTTNT
A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCAATGATCC
HNRAATCAAT-----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A G T C A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T