Information for 2-GTGGTCATGC (Motif 7)

A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.878e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background94.3 +/- 87.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTGGTCATGC--
NNGGTCACGCTC
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCATGC
AGRGGTCA---
A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GTGGTCATGC-
NNANTGGTGGTCTTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGTCATGC--
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTCATGC--
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

NR2C1/MA1535.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCATGC
CGAGGTCAC--
A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGGTCATGC
--AGTCACGC
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTCATGC
NRBCARRGGTCA---
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGGTCATGC
-AGGTCA---
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGGTCATGC----
GAGGTCATGACCTC
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C