Homer de novo Motif Results (motif_results/SRR3124829_amplicon4_ecDNA_3//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3
Total background sequences = 50000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A C T G A C T G A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)ZNF682/MA1599.1/Jaspar(0.607)
More Information | Similar Motifs Found
motif file (matrix)
2 * A G T C A G T C A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.673)
More Information | Similar Motifs Found
motif file (matrix)
3 * A C T G A G T C A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PB0056.1_Rfxdc2_1/Jaspar(0.795)
More Information | Similar Motifs Found
motif file (matrix)
4 * A G T C A G T C A G T C A C G T A C G T A G T C A G T C A C T G A G T C A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)ETV6/MA0645.1/Jaspar(0.758)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G A C G T A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C G T 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)ZBTB26/MA1579.1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C T G C G T A A C G T 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.674)
More Information | Similar Motifs Found
motif file (matrix)
7 * A G T C A G T C A C G T A G T C A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.596)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G A C G T A G T C 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)MSGN1/MA1524.1/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A C T G C G T A C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer(0.648)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C G T A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.690)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A A C G T A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)NFIC/MA0161.2/Jaspar(0.760)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.602)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)HOXC10/MA0905.1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PB0122.1_Foxk1_2/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C T G C G T A A G T C A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C G T 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)CREB1/MA0018.4/Jaspar(0.720)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A C G T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C G T C G T A C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PB0174.1_Sox30_2/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C G T 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)FOXF2/MA0030.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A G T C A C G T C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PB0005.1_Bbx_1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C G T A C T G A G T C 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)Arid5a/MA0602.1/Jaspar(0.721)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C G T C G T A C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PH0150.1_Pou4f3/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A C G T A G T C C G T A A G T C A C G T A G T C A G T C C G T A A C T G A C T G C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)SREBF2/MA0596.1/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C C G T A 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.724)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C A G T C 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)PH0169.1_Tgif1/Jaspar(0.597)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C T G 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)YY1(Zf)/Promoter/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A C G T A G T C A C G T A C G T C G T A C G T A A C T G A G T C A G T C C G T A A G T C 1e-4-1.023e+0133.33%0.00%0.0bp (0.0bp)ZBTB6/MA1581.1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T A G T C A C T G A C T G C G T A C G T A A C G T A G T C A C G T A C T G 1e-3-9.129e+0033.33%0.00%0.0bp (41.7bp)TEAD2/MA1121.1/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C A G T C A C T G A G T C A C T G A C G T C G T A A G T C 1e-3-9.129e+0033.33%0.00%0.0bp (5.9bp)ZBTB14/MA1650.1/Jaspar(0.792)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A C G T A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C T G 1e-3-8.842e+0033.33%0.01%0.0bp (84.3bp)SMAD5/MA1557.1/Jaspar(0.795)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A G T C A G T C A C G T A C T G A G T C A C G T C G T A A G T C A G T C 1e-3-7.663e+0033.33%0.02%0.0bp (59.3bp)PB0154.1_Osr1_2/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
30 * A T G C A T G C A C G T C G T A A T C G A C T G A C G T G C A T A G T C A G T C A C G T C G T A 1e-3-7.663e+0033.33%0.02%3.5bp (49.9bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.608)
More Information | Similar Motifs Found
motif file (matrix)
31 * A G T C A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A G T C 1e-3-7.338e+0033.33%0.02%0.0bp (71.5bp)CTCFL/MA1102.2/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
32 * C G T A A C G T A G T C A G T C A C G T C G T A A G T C A G T C C G T A C G T A 1e-3-7.284e+0033.33%0.02%0.0bp (65.9bp)PB0181.1_Spdef_2/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C 1e-3-7.184e+0033.33%0.03%0.0bp (69.9bp)TFAP2A/MA0003.4/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G 1e-2-6.861e+0033.33%0.04%0.0bp (64.0bp)SOX4/MA0867.2/Jaspar(0.804)
More Information | Similar Motifs Found
motif file (matrix)