Information for 5-TCCATTTTAC (Motif 12)

A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G C G T A
p-value:1e-3
log p-value:-8.009e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background115.1 +/- 78.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTTTAC
NNCCATTGTNN
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCCATTTTAC
GCNGCCATCTTG-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTTTAC
NNCCATTGTNN
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCCATTTTAC----
---NTTTTACGACC
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXC9/MA0485.2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCATTTTAC---
---NTTTTACGAC
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCCATTTTAC---
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCATTTTAC---
---NTTTTACGAC
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXB9/MA1503.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCATTTTAC---
---NTTTTACGAC
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCATTTTAC----
---NTTTTACGAGN
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXD10/MA1506.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCATTTTAC----
---NTTTTACGACC
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C