Information for 6-GGTGAGTGGTTG (Motif 9)

A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A G T C A G T C C G T A A G T C A C G T A G T C C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGTGAGTGGTTG
NNNTTGAGTGGNNN
A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

KLF17/MA1514.1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGTGAGTGGTTG
AAGGGGTGCGTGGTG-
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGTGAGTGGTTG
CTTGAGTGGCT-
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGTGAGTGGTTG
-TTAAGTGCTT-
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTGAGTGGTTG
-GTGAGTGNAC-
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGTGAGTGGTTG
-TTRAGTGSYK-
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTGAGTGGTTG
NCTGATTGGNN-
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTGAGTGGTTG
NCTGATTGGNN-
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGTGAGTGGTTG
--TGCGTGGGYG
A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

NKX2-5/MA0063.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAGTGGTTG
NNTTGAGTGNN--
A C G T A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T