Information for 13-GACAGGCAAC (Motif 25)

A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-7.584e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif23.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background114.6 +/- 92.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACAGGCAAC
NACAGGAAAT
A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGGCAAC
TTGACAGC----
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GACAGGCAAC---
--AAGGCAAGTGT
A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACAGGCAAC
TTGACAGG----
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAGGCAAC
NACAGGAAAT
A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACAGGCAAC
TBGCACGCAA-
A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAGGCAAC
GAAACAGGAAGT
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACAGGCAAC
CACAGN----
A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACAGGCAAC--
GTGCCACGCGACTG
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACAGGCAAC
TTGACAG-----
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T