Information for 8-AACTGTGAATGG (Motif 9)

C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYC/MA1644.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AACTGTGAATGG--
---NCTGATTGGNN
C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACTGTGAATGG
AAGGTGTKAA---
A C G T C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACTGTGAATGG
AGGTGTTAAT--
C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACTGTGAATGG--
---NCTGATTGGNN
C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AACTGTGAATGG
AAAGACCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACTGTGAATGG
AAGGTGTGAA---
A C G T C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACTGTGAATGG
AACGAGCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACTGTGAATGG
AACTAGCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACTGTGAATGG
AAAGACCTGTCAATCC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACTGTGAATGG
AGGTGTGAAA--
C G T A C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T