Information for 8-GGTTAGTCTTTA (Motif 10)

A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets154.0 +/- 0.0bp
Average Position of motif in Background103.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTTAGTCTTTA-
GGTTAAACATTAA
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGTTAGTCTTTA---
NGTTAATNATTAACN
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGTTAGTCTTTA-
-GTTAATNATTAA
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1B/MA0153.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTTAGTCTTTA--
-GTTAATGATTAAC
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

ZNF449/MA1656.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGTCTTTA
NNGGTTGGGCTTNN
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGTCTTTA
CAGGTAAGTAT---
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGTTAGTCTTTA-
------TGTTTAC
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

HOXA4/MA1496.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGTTAGTCTTTA-
-----GTCATTAG
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGTTAGTCTTTA-
------TGTTTAC
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGTTAGTCTTTA--
---TATTGTTTATT
A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T