Information for 11-GATTGCCATGGG (Motif 11)

A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GATTGCCATGGG-
CGGTTGCTATGGCA
A C G T A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATTGCCATGGG--
GGTTGCCATGGCAA
A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GATTGCCATGGG--
NGTTGCCATGGCAA
A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GATTGCCATGGG-
CTGTTGCTATGGCA
A C G T A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GATTGCCATGGG-
NNCGTTGCTATGGNN
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATTGCCATGGG---
KGTTGCCATGGCAAC
A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATTGCCATGGG---
CGGTTGCCATGGCAAC
A C G T A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Ebf2/MA1604.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATTGCCATGGG--
-NNTCCCTTGGGAN
A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

EBF3/MA1637.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATTGCCATGGG--
-NNTCCCTTGGGAN
A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GATTGCCATGGG-----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A