Information for 8-GGCTAAGTTCAG (Motif 9)

A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background138.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGCTAAGTTCAG
---TGAGTTCA-
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGCTAAGTTCAG
---AAAGTTCAT
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGCTAAGTTCAG
--CAAAGKTCAA
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCTAAGTTCAG
--CAAAGGTCAG
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCTAAGTTCAG-
TCCAAAGTCCAGA
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCTAAGTTCAG-
TCCAAAGTCCAAA
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGCTAAGTTCAG
CANAGNNCAAAGTCCA-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCTAAGTTCAG
TAGGGCAAAGGTCA-
A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCTAAGTTCAG-
--CAAAGGTCAAA
A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCTAAGTTCAG
TGGGGCAAAGGTCA-
A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T