Information for 9-TGTTTGGCCACG (Motif 11)

A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background187.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTTTGGCCACG
TGATTGGCTANN
A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTTTGGCCACG--
--TYTGACCASWRG
A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGGCCACG
NCTGATTGGNN---
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGGCCACG
NCTGATTGGNN---
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTTTGGCCACG
CTCATTGGCCAG-
A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGCCACG
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTTTGGCCACG----
NNTTTGCACACGGCCC
A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTTTGGCCACG
--NTTGGCANN-
A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGCCACG---
NNNNTTGGGCACNNCN
A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGCCACG
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G