Information for 22-GTTAAAGAGA (Motif 29)

A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A C G T A C G T C G T A C G T A A G T C
p-value:1e-2
log p-value:-6.626e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif60.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background97.5 +/- 70.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTTAAAGAGA----
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTAAAGAGA-
-ATAATGAGGT
A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T
A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTAAAGAGA-
-NTAATGAGCT
A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTTAAAGAGA---
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTAAAGAGA
TTTAATGAN-
A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:-10
Orientation:reverse strand
Alignment:----------GTTAAAGAGA
NMMNBAAAGGGTTAA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTAAAGAGA-----
TTGACCGAGAATTCC
A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTAAAGAGA
-TTAATTAG-
A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTAAAGAGA
NTTTTACGAGN
A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTAAAGAGA
-TTAATTAN-
A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A
A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T