Information for 11-GCCCCTGGTGAT (Motif 13)

A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.4/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCTGGTGAT-
NNTCCCCTGGGGANN
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCCCTGGTGAT
TCCCCTGGGGAC
A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCCCCTGGTGAT
NNTNCGCACCTGTNGAN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCCCTGGTGAT
NGTCCCNNGGGA-
A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCCCTGGTGAT
-NNCCTGCTGNG
A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCCTGGTGAT
CCCCCTGCTGTG
A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SCRT1/MA0743.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCTGGTGAT--
NNCCACCTGTTGAANN
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T
C G T A T C G A G T A C G T A C C T G A G A T C G A T C C G A T T A C G G A C T C A G T C T A G T G C A G C T A G A C T G C A T

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCCCTGGTGAT-
NABTCCCWDGGGAVH
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
C G T A C T G A A C T G A G C T A G T C G A T C G A T C G C A T C T G A C T A G C T A G T A C G T C G A T G C A G C A T

SCRT2/MA0744.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCTGGTGAT--
NNNCACCTGTTGCTNN
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T
C G T A C T G A G T A C G T A C C T G A G T A C G A T C C G A T A T C G G A C T C A G T C T A G T G A C G C A T A G C T G A C T

Zic2/MA1629.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCCCTGGTGAT--
CCCCCTGCTGTGNN
A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G