Information for 5-TTCACGAAATTC (Motif 7)

A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTCACGAAATTC---
TTTTACGACTTTCCAT
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCACGAAATTC
NACAGGAAAT--
A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCACGAAATTC
NHRTCACGACDN--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCACGAAATTC
GGTTCCNNAATTTG
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCACGAAATTC
TBGCACGCAA---
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCACGAAATTC
NACAGGAAAT--
A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTCACGAAATTC--
----GGAAATTCCC
A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTCACGAAATTC
NNNTTTTACGACNTTN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTCACGAAATTC
NNGTTTTACGACTTTA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTCACGAAATTC--
----GGAAATTCCC
A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C