Information for 3-TGTCAATTATGA (Motif 4)

A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAATTATGA--
NNCTNAATTATGANN
A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

HESX1/MA0894.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGTCAATTATGA
-NCCAATTANC-
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T

DLX5/MA1476.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTCAATTATGA
--GCAATTAC--
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T A C G T T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTCAATTATGA
--GCAATTAA--
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATTATGA
CCTGTCAA------
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTCAATTATGA
AACCAATTAAT-
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTCAATTATGA
--CCAATTAA--
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTCAATTATGA
--CCAATTAC--
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTCAATTATGA
-GCCAATTAAC-
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTCAATTATGA
--CCAATTAC--
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C T G C G T A
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T