Information for 19-ACAAATCCTTTA (Motif 21)

C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T
p-value:1e-4
log p-value:-9.623e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background79.0 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAAATCCTTTA
AAGATATCCTT--
A C G T C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACAAATCCTTTA-
GNNNATTAATCCCTNCN
A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

OTX2/MA0712.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAAATCCTTTA
NNCTAATCCCNN-
A C G T C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACAAATCCTTTA----
CAAAATCAATTAATTT
C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACAAATCCTTTA
--TAATCAATTA
C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACAAATCCTTTA--
----ANCGTTTANN
C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACAAATCCTTTA-
---AAACMATTAN
C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACAAATCCTTTA
NNCCATAAATCATNN-
A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T A C G T

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAAATCCTTTA
-CTAATCCTCTT
C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAAATCCTTTA
NYTAATCCYB--
C G T A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T