Information for 13-AGGGAAGCTC (Motif 17)

C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.614e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif46.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background96.7 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGGGAAGCTC
--NGAAGC--
C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGGAAGCTC-
-GGGAATTTCC
C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

ZNF528/MA1597.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGGAAGCTC----
CCCAGGGAAGCCATTTC
A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGGGAAGCTC-
----AAGCTTG
C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

RBPJ/MA1116.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGCTC
CCTGGGAAAG--
A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGCTC-
TGGGGAAGGGCM
A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGGGAAGCTC--
--GGAAATTCCC
C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGGGAAGCTC
TTAAGAGGAAGTTA
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGCTC
AAGGCAAGTGT
A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NFATC4/MA1525.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGCTC
AATGGAAAAT-
A C G T C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T