Information for 18-AACTATCAAT (Motif 29)

C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C G T A C G T
p-value:1e-3
log p-value:-7.425e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background89.2 +/- 87.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AACTATCAAT
HNRAATCAAT
C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AACTATCAAT--
AAAGACCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AACTATCAAT--
AACGAGCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

ONECUT1/MA0679.2/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AACTATCAAT-----
AAAAAATCAATAAATA
A C G T C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AACTATCAAT--
AACTAGCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AACTATCAAT--
AAAGACCTGTCAATCC
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AACTATCAAT-
---RRTCAATA
C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AACTATCAAT-----
TCACCCATCAATAAACA
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AACTATCAAT---
---TATCGATNAN
C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACTATCAAT------
GAAGATCAATCACTTA
C G T A C G T A A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A