Information for 18-CACTCATTTCTC (Motif 18)

A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background171.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACTCATTTCTC
GTACACTCAC-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACTCATTTCTC--
---TTCTTTCTCTT
A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACTCATTTCTC-
NNGCACCTTTCTCC
A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACTCATTTCTC
ACCACTCAAAA---
A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CACTCATTTCTC
TAACCACTCAAGAA--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACTCATTTCTC-
NNNCACTAATTANTNN
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CACTCATTTCTC
ACTTTCGTTTCT-
A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACTCATTTCTC
AASCACTCAA-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACTCATTTCTC
NNCTCATTAT--
A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTCATTTCTC---
TNNNATGATTTCNNCNN
A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T