Information for 10-GGGTTCAGCGGC (Motif 11)

A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A G T C A C G T A C T G C G T A C G T A A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets147.0 +/- 0.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGTTCAGCGGC
TGAGTTCA-----
A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTCAGCGGC
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTTCAGCGGC
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTCAGCGGC
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGTTCAGCGGC---
GGGGTCAATGACCTN
A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

MYBL2/MA0777.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTCAGCGGC-
GACNGTTTAACGGTT
A C G T A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGGTTCAGCGGC-
-----CAGCTGNT
A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGGTTCAGCGGC-
AGGGGGATTAGCTGCC
A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------GGGTTCAGCGGC
NMMNBAAAGGGTTAA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGTTCAGCGGC--
AGGGGTCAGAGGTCA
A C G T A C T G A C T G A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A