Information for 19-GCAGATTACAAC (Motif 19)

A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAGATTACAAC
NNAGATTAGAN-
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCAGATTACAAC
--AGATAASR--
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCAGATTACAAC
-CGGATTAN---
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAGATTACAAC
--AGATAAGANN
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGATTACAAC
GNGGATTAGN--
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGATTACAAC
VGGTVTCAGRTTWCA--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAGATTACAAC
-RGGATTAR---
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAGATTACAAC----
NNNNNBAGATAWYATCTVHN
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGATTACAAC----
-CAAACAACAACACCT
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

GATA5/MA0766.2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGATTACAAC
-CAGATAAGGA-
A C T G A G T C C G T A A C T G C G T A A C G T A C G T C G T A A G T C C G T A C G T A A G T C
A C G T A T G C G C T A A C T G C G T A A C G T C G T A C G T A A T C G T C A G T G C A A C G T