Information for 12-CAACTAAAATAC (Motif 14)

A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAACTAAAATAC-
AACCCAATAAAATTCG
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAACTAAAATAC
AACCAATAAAATTT
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAACTAAAATAC-
CTACCAATAAAATTCT
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAACTAAAATAC-
-DCYAAAAATAGM
A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAACTAAAATAC
CCYMATAAAA---
A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAACTAAAATAC-------
--CATACAATACGAAATAA
A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAACTAAAATAC
--CCAAAAATAG
A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAACTAAAATAC
NCYAATAAAA---
A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAACTAAAATAC-
AACAAACAACAAGAG
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

LHX2/MA0700.2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAACTAAAATAC
AACCAATTAAT----
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T C G T A A G T C
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T A C G T A C G T