Information for 12-CGGCTGGTGGAC (Motif 11)

A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A G T C A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGCTGGTGGAC
SDGCAGGTGCNS
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGCTGGTGGAC
NNGCAGGTGNN-
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGGTGGAC
NNGGCAGGTGCNN
A C G T A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF3/MA0522.3/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGCTGGTGGAC
NNGCAGGTGNN-
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGCTGGTGGAC
-RGCAGGTGYA-
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CGGCTGGTGGAC
------GTGGAT
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTGGTGGAC-
CACGGCAGTTGGTNN
A C G T A C G T A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

TCF4/MA0830.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTGGTGGAC
NNGGCAGGTGCNN
A C G T A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

SNAI1/MA1558.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCTGGTGGAC
-GGCAGGTGCA-
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C
A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCTGGTGGAC-----
NNANTGGTGGTCTTNNN
A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G