Information for 18-CTCAAAGTGC (Motif 26)

A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.098e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets164.0 +/- 0.0bp
Average Position of motif in Background94.8 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTCAAAGTGC---
TCCAAAGTCCAGA
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTCAAAGTGC---
TCCAAAGTCCAAA
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

TCF7/MA0769.2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTCAAAGTGC
ANATCAAAGNN-
A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTCAAAGTGC-
CANAGNNCAAAGTCCA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCAAAGTGC
--TTAAGTGC
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAGTGC
ACATCAAAGG--
A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCAAAGTGC--
--TTRAGTGSYK
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAAAGTGC--
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCAAAGTGC
ASATCAAAGG--
A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAAAGTGC--
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T