Information for 8-GGATATACAA (Motif 17)

A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.185e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background124.6 +/- 45.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGATATACAA---
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGATATACAA
--GTAAACAA
A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGATATACAA
GHATATKCAT
A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGATATACAA--
--ATATGCAAAT
A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGATATACAA
--GTAAACAA
A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGATATACAA
AAGGATATNTN-
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGATATACAA--
-AATAAACAATN
A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGATATACAA-----
AAAGTAAACAAAAATT
A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGATATACAA----
AAAAAGTAAACAAACAC
A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGATATACAA----
AAAAAGTAAACAAACAC
A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C