Information for 7-ACAATAATGGTG (Motif 7)

C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background170.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATAATGGTG
NNNTAACAATTATAN--
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACAATAATGGTG
-NNCTAATGGNN
C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAATAATGGTG
GACAATGNN----
A C G T C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------ACAATAATGGTG
TCACGGAACAATAGGTG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAATAATGGTG
AAAACAATAG-----
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACAATAATGGTG
NNTNANAACAATTNNA
A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACAATAATGGTG-
---NTAATKGTTT
C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

NKX6-3/MA1530.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACAATAATGGTG
--TTTAATGAN-
C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACAATAATGGTG
---NTAATTGN-
C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAATAATGGTG
--AATAATT---
C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C T G
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T