| p-value: | 1e-3 |
| log p-value: | -8.009e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 31.6 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 10.0 +/- 0.0bp |
| Average Position of motif in Background | 115.1 +/- 78.8bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SOX2/MA0143.4/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATTTTAC NNCCATTGTNN |
|
|
|
YY1/MA0095.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCCATTTTAC GCNGCCATCTTG- |
|
|
|
SOX13/MA1120.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATTTTAC NNCCATTGTNN |
|
|
|
HOXC12/MA0906.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCCATTTTAC---- ---NTTTTACGACC |
|
|
|
HOXC9/MA0485.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCCATTTTAC--- ---NTTTTACGAC |
|
|
|
PB0132.1_Hbp1_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCCATTTTAC--- TGTTCCCATTGTGTACT |
|
|
|
HOXD11/MA0908.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCCATTTTAC--- ---NTTTTACGAC |
|
|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCCATTTTAC--- ---NTTTTACGAC |
|
|
|
HOXC13/MA0907.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCCATTTTAC---- ---NTTTTACGAGN |
|
|
|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCCATTTTAC---- ---NTTTTACGACC |
|
|
|