Information for 20-GGTGTAAGGC (Motif 33)

A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T C G T A A G T C C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.905e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif34.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background107.6 +/- 129.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX5/MA0807.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTGTAAGGC
AGGTGTGA---
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTGTAAGGC
AGGTGTGA---
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTGTAAGGC
AGGTGTGA---
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTGTAAGGC
GAGGTGTGAA--
A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTAAGGC--
AGGTGNCAGACAG
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTGTAAGGC
GAGGTGTGAA--
A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTGTAAGGC
AGGTGTGA---
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTGTAAGGC
TAGGTGTGAAG-
A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTGTAAGGC-
AGGTGHCAGACA
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTGTAAGGC
AGGTGTGA---
A C G T A C T G A C T G A C G T A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T