Information for 1-TTATGTAGGTAC (Motif 2)

A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A G T C A C G T C G T A A G T C C G T A A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTATGTAGGTAC
-CATGCGGGTAC
A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTATGTAGGTAC
RTTATGYAAB---
A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTATGTAGGTAC
TATTATGCAATAT-
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTATGTAGGTAC
-TATGCGGGTA-
A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTATGTAGGTAC-
TATAAGTAGGTCAA
A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

HLF/MA0043.3/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTATGTAGGTAC
TTGTTATGCAACAA-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTATGTAGGTAC------
-NATTTAAGTACTTANNA
A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATGTAGGTAC
NGTTACGTAATN--
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATGTAGGTAC--
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RORC/MA1151.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTATGTAGGTAC
ATAAGTAGGTCA
A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T C G T A A G T C
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A