Information for 13-TTTGTTATTTTT (Motif 16)

A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.730e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif41.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background98.7 +/- 86.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTATTTTT
NCNTTTGTTATTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTTATTTTT-
NTNTTGTTGTTTGTN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTTATTTTT--
NNNTGTTGTTGTTNG
A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTTGTTATTTTT-----
--TTCTATTTTTAGNNN
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTTGTTATTTTT----
-NNTCTATTTTTAGNN
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTTATTTTT
NNTTTTTCTTATNT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTTGTTATTTTT---
---KCTATTTTTRGH
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTGTTATTTTT
GAATGTTTGTTT-
A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTATTTTT
TNNTCCTTTGTTCTNNT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTTGTTATTTTT---
---GCTATTTTTAGC
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C