Information for 3-GGGCTAAC (Motif 29)

A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
p-value:1e-2
log p-value:-5.671e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif156.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background97.0 +/- 70.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------GGGCTAAC
NMMNBAAAGGGTTAA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGCTAAC------
CCTTAGTTAACTAAAAT
A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGCTAAC
NGGATTAN
A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGCTAAC------
ACTTAGTTAACTAAAAA
A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTAAC----
GCTGGGGGGTACCCCTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGCTAAC
-NGCTN--
A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTAAC-----
NNNNCTGTTAACNNTNN
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGCTAAC----
--GTTAACTAGN
A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTAAC---
ACCGTTAACGGT
A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTAAC
NGGGATTA-
A C G T A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T