Information for 19-ACTTAGGGTCAC (Motif 19)

C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G T C A G T C A G T C A C G T C G T A C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.0 +/- 0.0bp
Average Position of motif in Background122.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C1/MA1535.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACTTAGGGTCAC
---CGAGGTCAC
C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACTTAGGGTCAC
----GAGGTCAT
C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACTTAGGGTCAC---
CGCGCCGGGTCACGTA
A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACTTAGGGTCAC
-----AGGTCA-
C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACTTAGGGTCAC
NRBCARRGGTCA-
A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAGGGTCAC----
NTNNNGGGGTCANGNNN
A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:7
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------ACTTAGGGTCAC
NNGAGGTTACTNNAGGTCA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ACTTAGGGTCAC
----AAGGTCAC
C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PSE(SNAPc)/K562-mStart-Seq/Homer

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACTTAGGGTCAC--
CTTTTHRSTTAKGGTGABTW
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C G T
G A T C G C A T C A G T C G A T G C A T G C T A T C A G T A G C G C A T A G C T C T G A A C G T C T A G C T A G A G C T C T A G C T G A A T G C G A C T G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACTTAGGGTCAC
---TRAGGTCA-
C G T A A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T