Information for 3-TAGAGAGCTATA (Motif 4)

A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C A C G T A G T C A C G T C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGCTATA
GGTTAGAGACCT---
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGCTATA
BTBRAGTGSN---
A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TAGAGAGCTATA-------
RGGCAMTAGGGAGCCATRGAAGGTK
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGCTATA
CTYRAGTGSY---
A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGCTATA
TTGAGTGSTT--
A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGCTATA-
GTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

ZNF16/MA1654.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAGAGAGCTATA---------
AATAGGGAGCCATGGAAGGTTTT
A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A A C G T C T G A C T A G C A T G A T C G C T G A C T A G G A T C G A T C T G C A A G C T C A T G T C A G T C G A C T G A C T A G C T A G A G C T A C G T A G C T A G C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TAGAGAGCTATA
RHHCAGAGAGGB---
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGCTATA
CTTGAGTGGCT--
A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGCTATA-
NTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T