Information for 1-AGGGGTCAGCGG (Motif 1)

C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A C G T A C T G C G T A A G T C A G T C A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background169.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AGGGGTCAGCGG-
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGGGGTCAGCGG
AGRGGTCA----
C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGGGGTCAGCGG-
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGTCAGCGG-
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGGGTCAGCGG
CAAAGGTCAAGGG
A C G T C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGGGTCAGCGG
NRBCARRGGTCA----
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGGGTCAGCGG---
AGGGGTCAGAGGTCA
C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

NR2C1/MA1535.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGGGTCAGCGG
CGAGGTCAC---
C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGGGGTCAGCGG
GKBCARAGGTCA----
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGGGGTCAGCGG
--AGGTCA----
C G T A A C T G A C T G A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C T G A C T G
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T