| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 152.0 +/- 0.0bp |
| Average Position of motif in Background | 100.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTGTCTTGGTGA CTGTCTGG---- |
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|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTGTCTTGGTGA- NNTNNTGTCTGGNNTNG |
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|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTGTCTTGGTGA -TGTCTAGA--- |
|
|
|
PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTGTCTTGGTGA- NNCTTTGTTTTGNTNNN |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTGTCTTGGTGA VBSYGTCTGG---- |
|
|
|
PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CTGTCTTGGTGA-------- ACTGACCCTTGGTTACCACAAAG |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 7 |
| Score: | 0.54 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTGTCTTGGTGA GCTGTG------- |
|
|
|
MEIS1/MA0498.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.54 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTGTCTTGGTGA NTGTCAN----- |
|
|
|
SOX10/MA0442.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTGTCTTGGTGA- --NNCTTTGTTNN |
|
|
|
MEIS3/MA0775.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTGTCTTGGTGA CCTGTCAA----- |
|
|
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