Information for 13-TATAATAATTCC (Motif 18)

A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-9.171e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets154.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TATAATAATTCC
---AATAATT--
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TATAATAATTCC-
NNTAATTATAATTNNN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TATAATAATTCC-
NANTATTATAATTNNN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TATAATAATTCC-
NNTAATTATAATNANN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TATAATAATTCC----
TTTATTAATTGCNNGN
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TATAATAATTCC
NNCNNAACAATTNT
A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TATAATAATTCC
-ATATTAATTAA
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TATAATAATTCC-
TAAGATTATAATACGG
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PITX2/MA1547.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TATAATAATTCC
----ATAATCCC
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TATAATAATTCC-
-----TAATCCCN
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G