Information for 1-ACTATCTCAATT (Motif 2)

C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTATCTCAATT
TTCTTTCTCTT--
A C G T C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACTATCTCAATT
AATGTATCAATT
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTATCTCAATT-
ATTATGCTAATTT
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACTATCTCAATT-
--TAATTTAATTA
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACTATCTCAATT--
--TAATTNAATTAA
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

PH0090.1_Lbx2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACTATCTCAATT-------
--TGCATTAATTAATGCGA
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTATCTCAATT
AATATGCAAATT
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ACTATCTCAATT--
------CCAATTAG
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ACTATCTCAATT--
------CCAATTAA
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTATCTCAATT--
NNCNNAACAATTNT
C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T