Information for 9-GGTTTAAGCCTA (Motif 9)

A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTAAGCCTA
GGGATTANN----
A C G T A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGTTTAAGCCTA
----TAATCCCN
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTAAGCCTA
VRGGATTARN----
A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTTTAAGCCTA------
---TTAACCCTTTVNKKN
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGTTTAAGCCTA
TGAACCGGATTAATGAA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGTTTAAGCCTA
TGAACCGGATTAATGAA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTTTAAGCCTA
---ATAATCCC-
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTTTAAGCCTA
---CTAATCCC-
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTTTAAGCCTA
---TTAATCCG-
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGTTTAAGCCTA
--GCTAATCC--
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T