Information for 3-TTGACACACGTG (Motif 3)

A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A C G T A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TTGACACACGTG
--DGCACACGTG
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G
A C G T A C G T C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:TTGACACACGTG-
-----ACACGTGC
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TTGACACACGTG--
----NACACGTGCN
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TTGACACACGTG--
------CACGTGBN
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.70
Offset:6
Orientation:forward strand
Alignment:TTGACACACGTG
------CACGTG
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TTGACACACGTG--
------CACGTGNC
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TTGACACACGTG--
------CACGTGDC
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTGACACACGTG--
----AACACGTGTT
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TTGACACACGTG--
----ACCACGTGCT
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TTGACACACGTG--
----ACCACGTGCC
A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C