Information for 17-CCTCCTTGGTAC (Motif 17)

A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background182.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTCCTTGGTAC-
--TACTTGGCAGA
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T
A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTTGGTAC
RGMCCTACTRTGTGC
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCTTGGTAC
NGGCCTCCCAGGGAG
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCCTTGGTAC---
TACCCTAGTTACCGA
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCTCCTTGGTAC-
---NNTTGGCANN
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTCCTTGGTAC-
---YCTTTGTTCC
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Stat5a/MA1624.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCCTTGGTAC
NNTTCTTGGAAN
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCTCCTTGGTAC---
----NTTGATACATT
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTCCTTGGTAC--
CCCCCTTGGGCCCC
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

SOX10/MA0442.2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTCCTTGGTAC-
--NNCTTTGTTNN
A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T