Information for 7-CAGCAATAGGGV (Motif 7)

A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T C G T A A G C T A C G T A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.022e+01
Information Content per bp:1.839
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif87.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets115.0 +/- 52.4bp
Average Position of motif in Background103.6 +/- 74.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGCAATAGGGV
CCAAAAATAG---
A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAATAGGGV
KCCAAAAATAGC--
A C G T A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCAATAGGGV
DCYAAAAATAGM--
A C G T A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAGCAATAGGGV
ATGCTAAAAATAGAA-
A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAATAGGGV
GCTAAAAATAGC--
A C G T A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCAATAGGGV
GAACAATGG---
A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGCAATAGGGV
--ATAGTAGGTG
A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCAATAGGGV
NNNNNGAACAATTGANN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAGCAATAGGGV-
TAGTGAACAATAGATTT
A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGCAATAGGGV
AGAACAATGG---
A C G T A G T C C G T A C T A G G T A C C G T A C T G A A C G T C G T A A C T G C T A G A C T G T A C G
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T A C G T