Information for 9-TCATTTGCCTGC (Motif 10)

A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCATTTGCCTGC
NNACTTGCCTT-
A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCATTTGCCTGC
TTCATTTGCATAT
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTGCCTGC
CTCATTTGCATW-
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

NFYB/MA0502.2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCATTTGCCTGC
CTCATTGGCCAG-
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCATTTGCCTGC--
TNTAATTTGCATACNA
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCATTTGCCTGC--
TNTAATTTGCATANNN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTGCCTGC
BTVATTWGCATA-
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCATTTGCCTGC-
NNATTTGCATATN
A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCATTTGCCTGC--
----TTGCGTGCVA
A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCATTTGCCTGC
--ATTTGCATAT
A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T