Information for 23-GGATTTAGTCTG (Motif 25)

A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGATTTAGTCTG-
-----TWGTCTGV
A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTAGTCTG-
NTTGATTGAATCWGV
A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGATTTAGTCTG
TAGAGGGATTAAATTTC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGATTTAGTCTG
NANAGGGATTAATTATN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGATTTAGTCTG
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTAGTCTG
VRGGATTARN----
A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGATTTAGTCTG
TGAGGGGGATTAACTAT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTAGTCTG
GGGATTANN----
A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGATTTAGTCTG
TGAACCGGATTAATGAA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGATTTAGTCTG
TGAACCGGATTAATGAA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C T G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T