| p-value: | 1e-3 |
| log p-value: | -7.778e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 20.0 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 165.0 +/- 0.0bp |
| Average Position of motif in Background | 97.9 +/- 72.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nr2e3/MA0164.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCAAGCATGC -CAAGCTT-- |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 2 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TCAAGCATGC- SCAGYCADGCATGAC |
|
|
|
PBX1/MA0070.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TCAAGCATGC CCATCAATCAAA- |
|
|
|
PAX6/MA0069.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCAAGCATGC--- TTCACGCATGAGTT |
|
|
|
PAX1/MA0779.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCAAGCATGC----- CGTCACGCATGACTGCA |
|
|
|
Dux/MA0611.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCAAGCATGC CCAATCAA-- |
|
|
|
PAX9/MA0781.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCAAGCATGC----- CGTCACGCATGACTGCA |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCAAGCATGC-- GCAGCCAAGCGTGACN |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCAAGCATGC GYCATCMATCAT-- |
|
|
|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCAAGCATGC GTCATCAATCATT- |
|
|
|