Information for 1-CTGAATGGGTCA (Motif 1)

A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGAATGGGTCA-----
GGCGAGGGGTCAAGGGC
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGAATGGGTCA-
-WAABTAGGTCAV
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

JUN::JUNB/MA1132.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTGAATGGGTCA--
----ATGAGTCATC
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G T A C

FOSL1/MA0477.2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGAATGGGTCA---
--NNATGAGTCATNN
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C T A G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A

JUND/MA0491.2/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGAATGGGTCA---
--NNATGAGTCATNN
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C A T G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGAATGGGTCA---
--NNATGAGTCATNN
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A

JUNB/MA0490.2/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGAATGGGTCA---
--NNATGAGTCATNN
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C G T A T C G A G A C T C A T G G C T A T A C G G C A T G T A C C T G A A G C T G A C T G C A T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAATGGGTCA
NNNNGTTGATTGGGTCG
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CTGAATGGGTCA
------AGGTCA
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGAATGGGTCA-----
NTNNNGGGGTCANGNNN
A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A