Information for 2-CTCACTTGATGT (Motif 2)

A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTCACTTGATGT
AGATCACCTGATCT
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
C T G A T C A G T C G A G C A T A T G C G C T A A T G C T A G C G C A T A T C G G C T A A G C T A G T C G A C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTCACTTGATGT
GTCACGTGAT--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCACTTGATGT
ATCACGTGAT--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCACTTGATGT
BRGTCACGTGAC--
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCACTTGATGT
-CCACTTGAA--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCACTTGATGT
ATCACGTGAT--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T A C G T A C G T

MITF/MA0620.3/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTCACTTGATGT--
TAAAGTCACGTGACTTTA
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T
G C A T C G T A C G T A C T G A T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A C T G C A T G C A T C G T A

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCACTTGATGT
GTCACGTGAC--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCACTTGATGT
--CACGTGAC--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
A C G T A C G T A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCACTTGATGT
ACCACTTGAA--
A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T