| p-value: | 1e-4 |
| log p-value: | -1.023e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 52.0 +/- 0.0bp |
| Average Position of motif in Background | 108.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
| Match Rank: | 1 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCTCTTCACCAG NSCACTYVAV--- |
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ATF6/MA1466.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCTCTTCACCAG NTGCCACGTCATCA- |
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CREB3L1/MA0839.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCTCTTCACCAG ATGCCACGTCATCA- |
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Nr2f6(var.2)/MA0728.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCTCTTCACCAG TGACCTTTTGACCTC |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
| Match Rank: | 5 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCTCTTCACCAG TGACCTTTGCCCCA- |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CCTCTTCACCAG CTTAACCACTTAAGGAT |
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|
|
ZNF263/MA0528.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCTCTTCACCAG CCTCCTCCCCNN |
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|
|
PH0040.1_Hmbox1/Jaspar
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCTCTTCACCAG----- GANGTTAACTAGTTTNN |
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|
Pparg::Rxra/MA0065.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCTCTTCACCAG TGACCTTTGCCCTAN |
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|
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NKX2-3/MA0672.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCTCTTCACCAG ACCACTTGAA--- |
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