Information for 9-AAATCAATTAGT (Motif 11)

C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.0 +/- 0.0bp
Average Position of motif in Background168.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAATCAATTAGT
TAATCAATTA--
C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAATCAATTAGT--
AAAAACCAATTAAGAA
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0088.1_Isl2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAATCAATTAGT--
CAAAATCAATTAATTT
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

PAX3/MA0780.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAATCAATTAGT
TAATCGATTA--
C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A A C G T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AAATCAATTAGT-
AAAAAATCAATAAATA
A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAATCAATTAGT--
AACAACCAATTAATTC
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAATCAATTAGT
HNRAATCAAT----
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAATCAATTAGT
TAATCGATTA--
C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAATCAATTAGT---
GATAATTAATTAGTTTG
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

Lhx3/MA0135.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAATCAATTAGT-
AAATTAATTAATC
C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C