Information for 23-CTGCTTCACATT (Motif 20)

A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background103.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGCTTCACATT
GTCTGTTTCTA---
A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGCTTCACATT
--GCTTCC----
A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTGCTTCACATT
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------CTGCTTCACATT
CCTTTACCCTTCTTCACCTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTTCACATT
TGCCTGCGYCMCCTT
A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGCTTCACATT------
-----TCACATTCCAGCC
A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGCTTCACATT
BTVATTWGCATA
A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGCTTCACATT--
---CTTCACACCTA
A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTGCTTCACATT
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

MXI1/MA1108.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGCTTCACATT--
----GACACATGGC
A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C