Information for 2-TTATGAGATATT (Motif 2)

A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGATATT
NAATTTTACGAGNTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGATATT
ANATTTTACGAGNNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATGAGATATT
TATTATGCAATAT-
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGATATT
GANTATTATGGGATGGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTATGAGATATT
ATAATGAGGT---
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTATGAGATATT---
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTATGAGATATT
NTAATGAGCT---
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTATGAGATATT
NTTTTACGAGN----
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

JUNB/MA0490.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTATGAGATATT-
NNATGAGTCATNN
A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
C G T A C G T A T C G A G A C T C A T G G C T A T A C G G C A T G T A C C T G A A G C T G A C T G C A T

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTATGAGATATT
--ATGAGTCAT-
A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T