Information for 6-GCTTGAGGAT (Motif 13)

A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background130.0 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTTGAGGAT--
NNTTGAGGTTNN
A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGAGGAT--
NNGCCTGAGGCANN
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCTTGAGGAT--
GGGCCTGAGGCGGG
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

MZF1/MA0056.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTTGAGGAT---
NNNTGGGGATTNN
A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGAGGAT
TGCCTGAGGCN
A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

ZBTB6/MA1581.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTTGAGGAT-
GTCCTTGAGCCCG
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTTGAGGAT----
---TGTGGATTNNN
A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTTGAGGAT---
-NNTGTGGATTSS
A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTTGAGGAT-
--TTGCGGTTT
A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTTGAGGAT--
ATTGCCTGAGGCAAT
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T