Information for 15-ATGGCAAGAC (Motif 35)

C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T
p-value:1e-3
log p-value:-7.652e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background90.5 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCAAGAC
NNTGCCAAGNN
A C G T C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

SMAD5/MA1557.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGGCAAGAC-
-TGTCTAGACA
C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C A C G T
A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGGCAAGAC
TTGCCAAG--
C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGGCAAGAC-
-TGTCTAGACG
C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGGCAAGAC-
AAGGCAAGTGT
C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATGGCAAGAC-
---TCTAGACA
C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCAAGAC
VGCTGGCA----
A C G T A C G T C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCAAGAC
AATGGAAAAT-
A C G T C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGCAAGAC
GGTGCCAAGT-
A C G T C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCAAGAC
TNCCATAGCAACNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A G T C
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G