Information for 22-ATTCAAAGATCT (Motif 18)

C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G C G T A C G T A A C G T
p-value:1e-3
log p-value:-8.665e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets133.0 +/- 0.0bp
Average Position of motif in Background99.7 +/- 82.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAAAGATCT
NATTCAAAT----
A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAAAGATCT
ANATCAAAGNN--
A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTCAAAGATCT
CGGTTTCAAA-----
A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATTCAAAGATCT
ACATCAAAGG---
A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATTCAAAGATCT-
TAATTCAATGAAGTG
A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATTCAAAGATCT
ASATCAAAGG---
A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T

Stat5a/MA1624.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTCAAAGATCT
TTTCCAAGAAAT
C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T

POU5F1/MA1115.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTCAAAGATCT
ATATGCAAATT---
A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTCAAAGATCT-
GGGTCCAAAGGTCAC
A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

POU2F3/MA0627.2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATTCAAAGATCT
AATATGCAAATAA--
A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A A C G T A C G T