Information for 2-TCGTACTA (Motif 18)

A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T C G T A A G T C A C T G C G T A
p-value:1e-3
log p-value:-8.447e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background104.1 +/- 85.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCGTACTA-
CACCTACTAT
A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCGTACTA----
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGTACTA-
AGTCGTAAAAA
A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGTACTA-
GGTCGTAAAAA
A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD10/MA1506.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGTACTA-
GGTCGTAAAAC
A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

HOXC9/MA0485.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGTACTA-
GTCGTAAAAT
A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCGTACTA-----
RGMCCTACTRTGTGC
A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

HOXB9/MA1503.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCGTACTA-
GTCGTAAAAT
A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCGTACTA------
AGNGTTCTAATGANN
A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCGTACTA-
GTCGTAAAAA
A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C G T C G T A A C G T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A