Information for 10-GAAATACAGCCA (Motif 11)

A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAATACAGCCA---
TCNNTTTACAGCGNNNT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAATACAGCCA---
TCNNTTTACAGCGNNNT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAATACAGCCA---
TCNCTTTACAGCGNNNT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAAATACAGCCA
----CACAGN--
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAATACAGCCA-
-GGGAACAGCCAC
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAAATACAGCCA-
-----BCAGACWA
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAAATACAGCCA
------CAGCC-
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAAATACAGCCA
TGAGTGACAGSC-
A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAAATACAGCCA-
TNGAATTTCATTNAN
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAAATACAGCCA-
TGGCAGNCTGCCAG
A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G