Information for 2-CCATGTAATTTC (Motif 3)

A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background108.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCATGTAATTTC
AATATACATGTAATATA
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCATGTAATTTC
--NDGTAATTAC
A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

PH0061.1_Hoxb6/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCATGTAATTTC-----
-NNNGTAATTACNNATA
A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CCATGTAATTTC
ANTTNTACATGTANTTN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCATGTAATTTC
----GTAATTGC
A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C

DLX5/MA1476.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCATGTAATTTC
----NTAATTGC
A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T C A G A C G T C G T A C G T A A C G T A C G T C T A G A T G C

HOXA5/MA0158.2/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCATGTAATTTC
----GTAATTAC
A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A T C G A C G T G T C A C G T A A C G T A C G T C T G A T A G C

HOXB8/MA1502.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCATGTAATTTC
----NTAATTGC
A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G T G A C

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCATGTAATTTC
ANTNTTACATGTATNTA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCATGTAATTTC
AAAATACATGTAATACT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A G T C
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T