| p-value: | 1e-3 |
| log p-value: | -6.936e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 44.0 |
| Percentage of Background Sequences with motif | 0.05% |
| Average Position of motif in Targets | 51.0 +/- 0.0bp |
| Average Position of motif in Background | 94.0 +/- 70.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATTAATAATC ATGAATATTC |
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Arid3b/MA0601.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTAATAATC NTAATTAATAT-- |
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PH0150.1_Pou4f3/Jaspar
| Match Rank: | 3 |
| Score: | 0.74 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------ATTAATAATC GACNTCATTAATAANN |
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|
PH0018.1_Dbx1/Jaspar
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------ATTAATAATC- TAATTAATTAATAATTA |
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|
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POU4F3/MA0791.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTAATAATC--- CTCATTAATTATGCAT |
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|
|
PH0120.1_Nkx6-3/Jaspar
| Match Rank: | 6 |
| Score: | 0.72 |
| Offset: | -7 |
| Orientation: | reverse strand |
| Alignment: | -------ATTAATAATC CNNANTAATTAATTNNC |
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|
|
PH0172.1_Tlx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.72 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------ATTAATAATC- TAATTAATTAATAACTA |
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|
|
Lhx3/MA0135.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATTAATAATC- AAATTAATTAATC |
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|
|
PH0119.1_Nkx6-1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------ATTAATAATC GANGTAATTAATTANN |
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|
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POU4F1/MA0790.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATTAATAATC--- CATTAATTATTCAT |
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