Information for 16-ACAGACCTAGAT (Motif 16)

C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACAGACCTAGAT-
NNHYTGACCTAGWTT
A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAGACCTAGAT
--TGACCTARTT
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAGACCTAGAT
--TGACCTARTT
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACAGACCTAGAT---
-TTGACCTANTTATN
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORC/MA1151.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAGACCTAGAT--
--TGACCTANTTAN
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACAGACCTAGAT
--TGACCTTGAT
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAGACCTAGAT-
-BTGACCTAVTTW
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACAGACCTAGAT
--AGGCCTAG--
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACAGACCTAGAT
--AGGCCTNG--
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

RORB/MA1150.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAGACCTAGAT
-NTGACCTAATT
C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
A C G T C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T