Information for 23-CCTCAGCCATCT (Motif 20)

A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G
p-value:1e-3
log p-value:-9.112e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background143.3 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCTCAGCCATCT--
--GCNGCCATCTTG
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

ZFP42/MA1651.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTCAGCCATCT------
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGCCATCT-------
GCCTCCTCCMTCWGACTGKS
A C G T A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

YY2/MA0748.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTCAGCCATCT
-CGCCGCCATNN
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T
A C G T A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

NEUROD1/MA1109.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCTCAGCCATCT----
---NNNCCATCTGTNN
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTCAGCCATCT--
--GCCGCCATCTTG
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CCTCAGCCATCT---
-----GCCATCTGTT
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCTCAGCCATCT-----
----NNCCATCTGTNNN
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTCAGCCATCT------
-CCNNACCATCTGGCCTN
A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

TFAP2A/MA0003.4/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTCAGCCATCT
ATTGCCTCAGGCCA--
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T A C G T