Information for 15-CACCACTGTCTA (Motif 17)

A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background110.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACCACTGTCTA--
NNNCCATTGTGTNAN
A C G T A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACCACTGTCTA
-NCCATTGTTY-
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CACCACTGTCTA--
------TGTCTAGA
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACCACTGTCTA--
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX2/MA0143.4/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACCACTGTCTA
NNCCATTGTNN-
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CACCACTGTCTA--
--CCATTGTTYYBB
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACCACTGTCTA
NNCCATTGTNN-
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACCACTGTCTA-
-----CTGTCTGG
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

MYB/MA0100.3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACCACTGTCTA
ACCAACTGTC--
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACCACTGTCTA
--CCATTGTTTT
A G T C C G T A A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T