Information for 13-TTGTTGTCTGTT (Motif 12)

A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGTCTGTT
NTNTTGTTGTTTGTN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTGTTGTCTGTT
---TWGTCTGV-
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGTCTGTT
GTNTTGTTGTGANNT
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTTGTCTGTT
NNNTGTTGTTGTTNG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTGTTGTCTGTT
-VBSYGTCTGG-
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTGTCTGTT----
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGTTGTCTGTT
CCATTGTTNY-----
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGTCTGTT
ATTGTT-------
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTGTTGTCTGTT
----TGTCGGTT
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGTTGTCTGTT
---CTGTCTGG-
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T