| p-value: | 1e-2 |
| log p-value: | -5.962e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 240.7 |
| Percentage of Background Sequences with motif | 0.26% |
| Average Position of motif in Targets | 51.0 +/- 0.0bp |
| Average Position of motif in Background | 95.2 +/- 74.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NR1H4/MA1110.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAAGGACC-- TCAATGACCTA |
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PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TAAGGACC- GGTTAGAGACCT |
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PH0073.1_Hoxc9/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TAAGGACC--- NNAATTAATGACCNNN |
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HOXA4/MA1496.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAAGGACC NTAATGAC- |
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|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAAGGACC NTAATGAT- |
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|
|
HOXA6/MA1497.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAAGGACC NNTAATTACN |
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|
|
POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAAGGACC- ATAATGAGGT |
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|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAAGGACC NTAATGAN- |
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|
|
HOXA9/MA0594.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TAAGGACC NNTTTACGAC- |
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|
|
HOXB7/MA1501.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAAGGACC GNTAATTACC |
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