Information for 16-AGCCGTCTGG (Motif 27)

C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.503e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background105.2 +/- 83.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AGCCGTCTGG
--CTGTCTGG
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGCCGTCTGG
VBSYGTCTGG
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGTCTGG-----
NNTNNTGTCTGGNNTNG
A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGCCGTCTGG---
---GGTCTGGCAT
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AGCCGTCTGG-
---TGTCTAGA
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGTCTGG--
NNNCCATCTGTNN
A C G T C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCCGTCTGG-
-NNCATCTGNN
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T
A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCCGTCTGG-
-GCCATCTGTT
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGTCTGG
TAAGGCGTCTTG
A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCCGTCTGG---
NNCCATCTGTNNN
C G T A A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C