Information for 20-ACAGCCTTGA (Motif 27)

C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C G T
p-value:1e-3
log p-value:-6.916e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif45.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background84.8 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF341/MA1655.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCTTGA
GGGAACAGCCAC--
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACAGCCTTGA-
NTGACCTTGAN
C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCTTGA
CACAGN-----
A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACAGCCTTGA-
-TGACCTTGAN
C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACAGCCTTGA
GGAACAGCCG---
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCTTGA--
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACAGCCTTGA
-CAGCC----
C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAGCCTTGA---
-TGACCTTGACCT
C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAGCCTTGA-
-TGACCTTGAV
C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCTTGA----
GCTGACCTTGAACTN
A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T