Information for 21-AGAAGTCCTTCG (Motif 21)

C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAAGTCCTTCG---
TACTAAGTACTTAAATG
A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTCCTTCG
AAGATATCCTT--
A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAAGTCCTTCG--
CTTTAAGTACTTAATG
A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGAAGTCCTTCG--
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGAAGTCCTTCG
------GCTTCC
C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ZNF274/MA1592.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGTCCTTCG
NNCGAGAACTCATACN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAGTCCTTCG
AAAAGTCAA---
C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAAGTCCTTCG
TTAAGTGCTT--
C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGAAGTCCTTCG---
TTTTAAGTACTTAAATT
A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGTCCTTCG
TAAGGCGTCTTG--
A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C T G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T