Information for 2-GTGGTTAACTTC (Motif 2)

A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTGGTTAACTTC---
CCTTAGTTAACTAAAAT
A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTAACTTC--
NNNTTAGTTAACTNANN
A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGGTTAACTTC----
AGCTGTTAACTAGCCGT
A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTTAACTTC
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTAACTTC
GCTGTGGTTT-----
A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTAACTTC
NNTGTGGTTT-----
A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGGTTAACTTC
ACTAGTTAAC---
A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTAACTTC
CTGTGGTTTN----
A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTAACTTC
NNHTGTGGTTWN----
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTGGTTAACTTC-
----TTGACTTTT
A C T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T