Information for 7-CCTAGTTCAC (Motif 25)

A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.950e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background116.1 +/- 76.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGTTCAC----
ANNNCTAGTTAACNGNN
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCTAGTTCAC--
GAGCCCTTGTCCCTAA
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTAGTTCAC
ACTAGTTAAC
A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCTAGTTCAC
-AAAGTTCAT
A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCTAGTTCAC---
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

VDR/MA0693.2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTAGTTCAC
-TGAGTTCA-
A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTAGTTCAC
CAAAGKTCAA
A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGTTCAC-----
NNNTTAGTTAACTNANN
A C G T A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTAGTTCAC
CAAAGGTCAG
A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTAGTTCAC
--AAGGTCAC
A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C