Information for 4-CCCATGCACG (Motif 9)

A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background134.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCATGCACG-
GCGCATGCGCAC
A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCCATGCACG---
-----GCACGTAY
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCATGCACG
ACGCCCACGCA--
A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCCATGCACG---
-----GCACGTNC
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCCATGCACG
CTACGCCCACGCACT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

HIF1A/MA1106.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCCATGCACG---
---NNGCACGTNC
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCATGCACG
CRCCCACGCA--
A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

ZBTB14/MA1650.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCATGCACG-
CCCCGCGCACCC
A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCCATGCACG--
----BGCACGTA
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

EGR4/MA0733.1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCCATGCACG-
TTACGCCCACGCATTT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T