Information for 16-GATCTTTGGG (Motif 32)

A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C
p-value:1e-3
log p-value:-7.532e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background98.2 +/- 73.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATCTTTGGG---
NTGACCTTTGGACCC
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G C A T A G C T C T A G C T A G G T C A G T A C A G T C A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GATCTTTGGG-
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GATCTTTGGG-
NNNNTGACCTTTNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATCTTTGGG
CTGACCTTTG--
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATCTTTGGG-----
TGGACTTTGNNCTNTG
A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR4A1/MA1112.2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATCTTTGGG
NNTGACCTTTNN-
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A A C G T

TCF7L1/MA1421.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GATCTTTGGG
CCTTTGATCTTT---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATCTTTGGG
NNTGACCTTTN--
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATCTTTGGG
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

HNF4G/MA0484.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATCTTTGGG
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A