Information for 1-GCGCTAGACC (Motif 1)

A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C G T C G T A A C T G A G T C A C T G A G T C
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCGCTAGACC
--TCTAGACA
A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAGACC----
NGNTCTAGAACCNGV
A C G T A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGCTAGACC
GGGCGGGACC
A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCTAGACC
AGGTGHCAGACA
A C G T A C G T A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTAGACC-----
NNGATCTAGAACCTNNN
A C G T A C G T A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGCTAGACC-
GRTGMTRGAGCC
A C G T A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PAX5/MA0014.3/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGCTAGACC--
GAGCGTGACCCC
A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCGCTAGACC-
---CTAGGCCT
A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGCTAGACC----
-CNNTTGACCTTTG
A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

ZBTB12/MA1649.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGCTAGACC--
-ATCTGGAACCC
A C T G A G T C A C T G A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C G T
A C G T T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C