Information for 3-CTGGGGATGCTC (Motif 3)

A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C C G T A A C G T A G T C A G T C A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background109.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGATGCTC
NNNTGGGGATTNN-
A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGGGGATGCTC
WDNCTGGGCA-----
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGGGGATGCTC
CTGCGCATGCGC
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGGGGATGCTC--
--GGGGATTCCCCC
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGGGATGCTC-
-TGGGGAAGGGCM
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

EBF1/MA0154.4/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGGATGCTC
NNTCCCCTGGGGANN---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGGGATGCTC
GTGCGCATGCGC
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGGGATGCTC--
-AGGGGATTCCCCT
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGGGGATGCTC--
-AGGGGAATCCCCT
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

ZNF460/MA1596.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGGGATGCTC----
CTCGGGAGGCTGAGGC
A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A G T C A G C T A G T C T C A G T A C G T A C G G T C A T A C G T C A G G A T C A C G T T A C G T C G A T A C G T A C G A G T C