Information for 10-GAGCCACTGGCC (Motif 10)

A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1D1/MA1531.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCACTGGCC-
NTGACCTACTGACCC
A C G T A C G T A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAGCCACTGGCC--
--CTCATTGGCCAG
A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCACTGGCC---
TGACCCAGTGACCTAC
A C G T A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCCACTGGCC--
AGGTCANTGACCTN
A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGCCACTGGCC---
---CYWSTGGTCARA
A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGCCACTGGCC
-AGCCTCAGGCA
A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCCACTGGCC----
CAATCACTGGCAGAAT
A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCACTGGCC-
NNCGCCTCAGGCNN
A C G T A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

NR1D2/MA1532.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCACTGGCC-
NTGACCCACTAACCC
A C G T A C G T A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAGCCACTGGCC--
---NNACTTGCCTT
A C T G C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T