Information for 3-ACTGCTGAGAAG (Motif 3)

C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGAAG
AAAWWTGCTGACWWD
A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGAAG
TNTCCTGCTGTGNNG
A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic2/MA1629.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGAAG
CCCCCTGCTGTGNN-
A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTGCTGAGAAG
AAAATGCTGACT--
A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T

MAFG/MA0659.2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACTGCTGAGAAG
NAAAAATGCTGACTC-
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
C G T A C T G A C T G A C G T A C G T A G C T A G C A T C T A G T G A C G C A T C A T G G C T A A T G C G C A T G A T C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTGAGAAG
CCCCCTGCTGTG---
A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACTGCTGAGAAG
-CTTCTGGGAAA
C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTGCTGAGAAG
NTTTCTNAGAAA
C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTGCTGAGAAG
CCTGCTGAGH--
C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

MAFF/MA0495.3/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGCTGAGAAG
NNNAAAATGCTGACTN-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A A C T G
C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C A T T C A G G T A C G C A T C A T G G C T A A T G C G C A T G A C T A C G T