Information for 9-ATTGTGAATAAG (Motif 9)

C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTGTGAATAAG
CTCATTGTC------
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTGTGAATAAG
ATTGTTTAN---
C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTGTGAATAAG
TATGTAAATAT-
C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGAATAAG---
TAAATGTAAACAAAGGT
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATTGTGAATAAG
GTATCTATTGTTCTTTA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGAATAAG---
AAAATATGCATAATAAA
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTGTGAATAAG-
NCWRWGTAAACANSV
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTGTGAATAAG-
---ATGMATATDC
C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATTGTGAATAAG
GGAAAAATTGTTAGGAA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGAATAAG---
AAAAAGTAAACAAAGAC
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C