Information for 2-GATAGGCAGGCA (Motif 2)

A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background168.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GATAGGCAGGCA----
NGTAGGTTGGCATNNN
A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATAGGCAGGCA
TGAGTGACAGSC-
A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATAGGCAGGCA
NTGATTGACAGN--
A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GATAGGCAGGCA-
---TBGCACGCAA
A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GATAGGCAGGCA
----VGCTGGCA
A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATAGGCAGGCA
BTGABTGACAGS--
A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GATAGGCAGGCA-
--AAGGCAAGTGT
A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PBX3/MA1114.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GATAGGCAGGCA-
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GATAGGCAGGCA-
----GGTTGGCAT
A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GATAGGCAGGCA
AAGGKGRCGCAGGCA
A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A