Information for 1-TTTGACCAGATA (Motif 2)

A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T A G T C C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTTGACCAGATA
TYTGACCASWRG
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTGACCAGATA------
--TGACCATATATGGTCA
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTGACCAGATA
--TGCCCAGNHW
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTGACCAGATA
NTTTTACGAGN--
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTGACCAGATA---
-AAGATAAGATAACA
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTGACCAGATA-
ANATTTTACGAGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTTGACCAGATA---
---RHHCAGAGAGGB
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTTGACCAGATA
--TGACCT----
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTTGACCAGATA---
--ATTCCAGATGTTT
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGACCAGATA-
NAATTTTACGAGNTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T