Information for 15-AGTATTTTGCTC (Motif 19)

C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
p-value:1e-3
log p-value:-9.171e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTATTTTGCTC--
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTATTTTGCTC---
ANATTTTTGCAANTN
C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTATTTTGCTC
NNGTANTGTTTTNC--
A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTATTTTGCTC--
ACGGTAATTAGCTCAG
A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGTATTTTGCTC
TTCNAAGTACTTNNNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

POL007.1_BREd/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTATTTTGCTC
-GTTTGTT----
C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTATTTTGCTC----
TNNTCCTTTGTTCTNNT
A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PH0081.1_Pdx1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTATTTTGCTC--
AAGGTAATTAGCTCAT
A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGTATTTTGCTC----
TGGACTTTGNNCTNTG
C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGTATTTTGCTC----
NNNTCCTTTGTTCTNNN
A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T