Information for 12-TATTTTATTCAA (Motif 12)

A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background117.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTATTCAA--
NTNAATTTTATTGNATT
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTATTCAA--
NNANTTTTATTGGNNN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13/MA0901.2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTATTCAA-
NNATTTTATTGGNN
A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATTTTATTCAA--
CCATTGTATGCAAAT
A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTATTCAA----
NNNTTTTAATTAANNNN
A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

HLF/MA0043.3/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TATTTTATTCAA---
-TTGTTATGCAACAA
A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTATTCAA--
NNAATTTTATTGGNTN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TATTTTATTCAA-----
-AATCAATTCAATAATT
A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TATTTTATTCAA---
ANATTTTTGCAANTN
A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFIL3/MA0025.2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TATTTTATTCAA---
--TATTATGCAATAT
A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T