Information for 1-TCCTTACGAA (Motif 1)

A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C T G A C G T C G T A C G T A A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background173.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCTTACGAA
TTCTNMGGAA
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

GMEB2/MA0862.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCCTTACGAA-
---TTACGTAA
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCTTACGAA
ANTTCTNNAGAA
A C G T A C G T A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTACGAA---
ANTTCTCAGGAANNN
A C G T A C G T A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTACGAA
NNCTCATTAT---
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T A C G T

HOXA9/MA0594.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCTTACGAA
NNTTTACGAC
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCTTACGAA-
NTTTTACGACT
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCTTACGAA
NTTTTACGAC
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

CEBPB/MA0466.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCCTTACGAA--
--ATTGCGCAAT
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C G T A C G T
A C G T A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCTTACGAA-
NTTTTACGACC
A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C