Information for 5-CAAGGCCCGTGC (Motif 6)

A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES2/MA0616.2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CAAGGCCCGTGC-
---GGCACGTGCC
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A T C G C A T G T G A C C T G A A G T C A C T G A G C T T C A G A G T C A T G C

HES1/MA1099.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CAAGGCCCGTGC-
---GGCACGTGGC
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C T G C A T G G T A C C T G A A G T C C T A G G A C T C A T G A T C G A T G C

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAAGGCCCGTGC--
--TGGCACGTGCCA
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAAGGCCCGTGC--
--TGGCACGTGCCG
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HEY1/MA0823.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAAGGCCCGTGC-
---GGCACGTGTC
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAAGGCCCGTGC-
---GACACGTGCC
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAAGGCCCGTGC
--NGKCACGTGM
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C
A C G T A C G T T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C

SOHLH2/MA1560.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAAGGCCCGTGC-
---NGCACGTGCG
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A G C T A C T G A G T C C T G A G T A C T A C G A G C T C T A G T G A C C T A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCCCGTGC
NTCAAGGTCA----
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGGCCCGTGC---
-CAGGCCNNGGCCNN
A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C