Information for 4-TAAGTGCCCT (Motif 15)

A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.237e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background110.8 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCCCT
TTAAGTGC---
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TAAGTGCCCT
RGTTAGTGCCCY
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCCCT
TTAAGTGCTT-
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCCCT
TTAAGTGGT--
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCCCT
TTGAGTGSTT-
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAAGTGCCCT-
NTTAAGTGGTTNN
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAAGTGCCCT
NTCAAGTGGN--
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAAGTGCCCT-----
GGGTGTGCCCAAAAGG
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGCCCT--
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAAGTGCCCT
CTAATKGV---
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C A C G T
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T