Information for 3-GAACGTTATG (Motif 3)

A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background105.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OVOL1/MA1544.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAACGTTATG--
AAAACCGTTATTTG
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

OVOL2/MA1545.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAACGTTATG--
GTACCGTTATGTG
A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAACGTTATG--
-AAGGATATNTN
A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACGTTATG---
VAGRACAKWCTGTYC
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAACGTTATG---
AAGAACATWHTGTTC
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAACGTTATG
--ACGTCA--
A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAACGTTATG
-TACGTCAT-
A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAACGTTATG-----
GGGAACATTGTGTTCCC
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAACGTTATG---
VAGRACAKNCTGTBC
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAACGTTATG-----
NGGAACATNATGTACCC
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C