| p-value: | 1e-3 |
| log p-value: | -8.872e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 170.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 1 |
| Score: | 0.80 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AAGCCATTAATC- -RGCCATYAATCA |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAGCCATTAATC- -GGCCATAAATCA |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AAGCCATTAATC- ---TCATCAATCA |
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Hmx1/MA0896.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAGCCATTAATC--- ACAAGCAATTAATGAAT |
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|
|
PH0041.1_Hmx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAGCCATTAATC--- ACAAGCAATTAATGAAT |
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|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 6 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAGCCATTAATC -GGCCATTAAC- |
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|
|
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
| Match Rank: | 7 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAGCCATTAATC AAACMATTAN-- |
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|
|
Hmx2/MA0897.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAGCCATTAATC--- ACAAGCAATTAAAGAAT |
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|
|
PH0042.1_Hmx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAGCCATTAATC--- ACAAGCAATTAAAGAAT |
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PH0080.1_Hoxd8/Jaspar
| Match Rank: | 10 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AAGCCATTAATC----- NAGCCATTAATTANTTA |
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