Information for 5-TGGACTTGGAAT (Motif 6)

A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A/MA0114.4/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTGGAAT
NNTGGACTTTGNN-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTGGAAT
NNTGGACTTTGNN-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTGGAAT
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGGACTTGGAAT--
----NCTGGAATGC
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGGACTTGGAAT---
-----CTGGAATGYA
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

TEAD4/MA0809.2/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGGACTTGGAAT----
----NCTGGAATGTNN
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGACTTGGAAT
TGACCTTGAN--
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGACTTGGAAT-
--TACTTGGCAGA
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTGGAAT-
GCTGACCTTGAACTN
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGACTTGGAAT----
TGGACTTTGNNCTNTG
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G