Information for 17-GGAGTAATGAGT (Motif 19)

A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GGAGTAATGAGT-
---ATAATGAGGT
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PH0039.1_Mnx1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGAGTAATGAGT----
GTACTAATTAGTGGCG
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGAGTAATGAGT-
---NTAATGAGCT
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0175.1_Vax2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAGTAATGAGT----
GNCTTAATTAGTGNNN
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

PH0062.1_Hoxb7/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAGTAATGAGT----
GTAGTAATTAATGCAA
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

HOXC4/MA1504.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAGTAATGAGT
---NTAATGAN-
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T

HOXD3/MA0912.2/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAGTAATGAGT
---GTAATTAG-
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAGTAATGAGT----
GTAGTAATTAATGGAA
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

HOXA2/MA0900.2/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGAGTAATGAGT
---NTAATTAN-
A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A T G C A G C T C G T A C G T A A C G T A C G T C T G A A T G C A C G T

PH0031.1_Evx1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAGTAATGAGT----
AGAACTAATTAGTGGAC
A C G T A C T G A C T G C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C