Information for 1-TGCTTACCTTCC (Motif 2)

A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTACCTTCC
NNACTTACCTN--
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTACCTTCC
NTTGTTTACGTTNN
A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTTACCTTCC
NNNTTTGTTTACATTTN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

FOXP3/MA0850.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTTACCTTCC
TGTTTAC-----
A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTTACCTTCC
TGTTTACTTT--
A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTACCTTCC
ATGTTTAC-----
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTTACCTTCC
NNNTTTGTTTACNTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTTACCTTCC
NNNTTTGTTTACNTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTTACCTTCC
TGTTTACTTT--
A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXK1/MA0852.2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGCTTACCTTCC
NNCTTGTTTACNNN--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A G T C
A C T G A T G C A T G C A G C T C A G T T C A G C A G T A C G T A C G T G C T A A G T C G T C A G A C T G C A T A C G T A C G T