Information for 12-CTATGTCTTTGC (Motif 12)

A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets181.0 +/- 0.0bp
Average Position of motif in Background154.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTATGTCTTTGC
CCTTTGTTTT---
A C G T A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTATGTCTTTGC
ANTCCTTTGTCTNNNN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTATGTCTTTGC
-BNTGDCCTTG-
A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTCTTTGC
NNCTTTGTTNN---
A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTATGTCTTTGC
CCATTGTTTT---
A C G T A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTATGTCTTTGC
-NATGACCTTGA
A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTATGTCTTTGC---
----TCCTTTGATGT
A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTCTTTGC---
NNNNATGACCTTGANTN
A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTATGTCTTTGC-
--NTGACCTTGAN
A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C A C G T
A C G T A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTATGTCTTTGC
AAGATATCCTT--
A C G T A G T C A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T