Information for 1-CKAKAGMKGTAR (Motif 1)

A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A A G T C G T C A C A G T A G T C A C G T G T C A C G A T G T C A A C T G
p-value:1e-6
log p-value:-1.393e+01
Information Content per bp:1.833
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif111.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets132.5 +/- 20.5bp
Average Position of motif in Background86.5 +/- 167.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21/MA0832.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CKAKAGMKGTAR-
NCAACAGCTGTTGC
A C G T A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

MYF5/MA1641.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CKAKAGMKGTAR
GAACAGCTGTTC
A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CKAKAGMKGTAR
NNACAGCTGTNN
A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G
T C A G T G A C T C G A G T A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CKAKAGMKGTAR
BAACAGCTGT--
A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CKAKAGMKGTAR----
TAAATACATGTAAAATT
A C G T A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CKAKAGMKGTAR
-GACAGCTGTT-
A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G
A C G T C T A G C T G A A G T C C G T A A C T G G T A C C G A T A C T G A G C T A G C T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CKAKAGMKGTAR-
AAACAGATGTTTA
A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CKAKAGMKGTAR----
AATATACATGTAATATA
A C G T A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CKAKAGMKGTAR----
AAAATACATGTAATACT
A C G T A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CKAKAGMKGTAR
NNNACCGAGAGTNNN--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G G T A C A C G T A C T G A C G T C G T A C T A G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T