| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 180.0 +/- 0.0bp |
| Average Position of motif in Background | 120.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA4/MA1496.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---GTCATTAG- |
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HOXB4/MA1499.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---ATCATTAG- |
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HOXD3/MA0912.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGAGTCATTAGA ---GTAATTAG- |
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|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---GTCATTAA- |
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|
|
HOXD4/MA1507.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---ATCATTAG- |
|
|
|
GSX2/MA0893.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---GTAATTAG- |
|
|
|
NKX6-3/MA1530.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---CTCATTAAA |
|
|
|
HOXA2/MA0900.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA ---GTAATTAG- |
|
|
|
HOXB3/MA0903.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGAGTCATTAGA --ACTAATTAGC |
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|
|
VAX2/MA0723.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGAGTCATTAGA ---NTAATTAG- |
|
|
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