Information for 15-TTAATGAGGA (Motif 21)

A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A C G T A
p-value:1e-3
log p-value:-7.436e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets178.0 +/- 0.0bp
Average Position of motif in Background98.3 +/- 83.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TTAATGAGGA
ATAATGAGGT
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAGGA---
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

NKX6-3/MA1530.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTAATGAGGA
TTTAATGAN--
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TTAATGAGGA
NTAATGAGCT
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TTAATGAGGA---
AAACATAATGAGGTTGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TTAATGAGGA-
AGTTATTAATGAGGTC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

NKX6-1/MA0674.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTAATGAGGA
TTAATTAN--
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTAATGAGGA
NNTAATTAGN-
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTAATGAGGA
NTAATGAN--
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTAATGAGGA
TTAATTAN--
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C T G C G T A
C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T