Information for 2-KTGRWRCTCAMM (Motif 3)

C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C
Reverse Opposite:
A C T G C A G T A C G T A C T G C G T A A C T G A G C T C G T A A G C T A G T C C G T A G T A C
p-value:1e-4
log p-value:-1.048e+01
Information Content per bp:1.805
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif251.1
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets131.0 +/- 27.5bp
Average Position of motif in Background100.1 +/- 73.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KTGRWRCTCAMM-
--ACCACTCAAAA
C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C A C G T
A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KTGRWRCTCAMM
-GTACACTCAC-
C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C
A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KTGRWRCTCAMM
SCTGTCAVTCAV-
A C G T C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---KTGRWRCTCAMM
NNGCTGTCACTCANN
A C G T A C G T A C G T C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PBX3/MA1114.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----KTGRWRCTCAMM-
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A C G T C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KTGRWRCTCAMM
-TGGGGCCCAC-
C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KTGRWRCTCAMM
NCTGTCAATCAN-
A C G T C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KTGRWRCTCAMM-
-AAAACCTCAAAT
C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C A C G T
A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--KTGRWRCTCAMM-
TAATGATGATCACTA
A C G T A C G T C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:KTGRWRCTCAMM--
---NNACTTACCTN
C A G T A C G T A C T G C T G A C G A T C T G A A G T C A C G T A G T C C G T A G T A C G T A C A C G T A C G T
A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G