Information for 2-ATGAAACCTAGA (Motif 3)

C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C G T A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGAAACCTAGA
ACTGAAACCA---
A C G T C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATGAAACCTAGA-
ATAAATGACACCTATCA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Prdm15/MA1616.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGAAACCTAGA--
AGGAAAACCTGGAGC
A C G T C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

IRF5/MA1420.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGAAACCTAGA--
CCGAAACCGAAACT
C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGAAACCTAGA
GGYAATGAAA------
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATGAAACCTAGA
GGCMATGAAA------
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

IRF4/MA1419.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGAAACCTAGA---
CCGAAACCGAAACTA
C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGAAACCTAGA--
TCGAAACCGAAACT
C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATGAAACCTAGA
-TGACACCT---
C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGAAACCTAGA--
AACGAAACCGAAACT
A C G T C G T A A C G T A C T G C G T A C G T A C G T A A G T C A G T C A C G T C G T A A C T G C G T A A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T