Information for 11-GTTGAGCTGAGC (Motif 10)

A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTGAGCTGAGC
NNGGTTGGGCTTNN-
A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTTGAGCTGAGC
-TTGAMCTTTG-
A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTTGAGCTGAGC-
GGAGGAGGTGAGAA
A C G T A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTTGAGCTGAGC
--TGACCTYA--
A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTGAGCTGAGC
-GTGGGGTGAT-
A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTTGAGCTGAGC
--HCAGCTGDTN
A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTTGAGCTGAGC
GTCCTTGAGCCCG--
A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAGCTGAGC
NNTTGAGGTTNN-
A C G T A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTTGAGCTGAGC
------CGGAGC
A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTTGAGCTGAGC
-ATGGGGTGAT-
A C T G A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T