| p-value: | 1e-4 |
| log p-value: | -1.027e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 178.0 +/- 0.0bp |
| Average Position of motif in Background | 151.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
POL012.1_TATA-Box/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTATAAAACTCT--- GTATAAAAGGCGGGG |
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TBP/MA0108.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTATAAAACTCT--- GTATAAAAGGCGGGG |
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PH0078.1_Hoxd13/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTATAAAACTCT CTACCAATAAAATTCT |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GTATAAAACTCT CYHATAAAAN--- |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GTATAAAACTCT NCYAATAAAA---- |
|
|
|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GTATAAAACTCT NGYCATAAAWCH-- |
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MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTATAAAACTCT TTCAAAWTAAAAGTC- |
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|
Arid3a/MA0151.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GTATAAAACTCT --ATTAAA---- |
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|
|
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTATAAAACTCT AGAGCCATAAAATTCG |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTATAAAACTCT CCYMATAAAA---- |
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