| p-value: | 1e-4 |
| log p-value: | -1.022e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 21.0 +/- 0.0bp |
| Average Position of motif in Background | 25.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0115.1_Nkx2-6/Jaspar
| Match Rank: | 1 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CCTCTTAGAGTT TAAGCCACTTAACATT |
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PH0114.1_Nkx2-5/Jaspar
| Match Rank: | 2 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CCTCTTAGAGTT TAAGCCACTTGAATTT |
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TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCTCTTAGAGTT CCTTTTATAGNC |
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|
|
Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCTCTTAGAGTT ACCACTTAA---- |
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|
|
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCTCTTAGAGTT- AAACCTCGTAAAATTT |
|
|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCTCTTAGAGTT- AAAGCTCGTAAAATTT |
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|
|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CCTCTTAGAGTT ATAACCACTTAAA--- |
|
|
|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 8 |
| Score: | 0.54 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCTCTTAGAGTT BCMATTAG---- |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CCTCTTAGAGTT CTTAACCACTTAAGGAT |
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|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CCTCTTAGAGTT CATAACCACTTAACAAC |
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