Information for 25-CATTAAGTGGAC (Motif 31)

A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.478e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGTGGAC---
NTNNTTAAGTGGNTNAN
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGGAC
--TTAAGTGGT-
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATTAAGTGGAC--
-NTTAAGTGGTTNN
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A C G T
A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGTGGAC---
NTNNTTAAGTGGTTANN
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGGAC
--TTAAGTGC--
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CATTAAGTGGAC
-NTCAAGTGGN-
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGGAC
--TTGAGTGSTT
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CATTAAGTGGAC
-BTBRAGTGSN-
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGTGGAC--
AATNTTAAGTGGNTNN
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CATTAAGTGGAC
-NTCAAGTGG--
A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G C G T A A G T C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T