Information for 5-AAAGCTCACACA (Motif 6)

C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTCACACA
TTAAAGGTCAAA--
A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAGCTCACACA
TCTCAAAGGTCACCTG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AAAGCTCACACA
ANGNAAAGGTCA----
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTCACACA
CAAAGGTCAAA--
A C G T C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAGCTCACACA
TCTCAAAGGTCACGAG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAAGCTCACACA
-AAGGTCAC---
C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTCACACA---
AGCGGCACACACGCAA
A C G T C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAGCTCACACA
AAAGTTCAT---
C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAAGCTCACACA-
-----TCACACCT
C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAAGCTCACACA-
-----TCACACCT
C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T