Information for 16-AGTCCAATTCTG (Motif 14)

C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AGTCCAATTCTG
GGCAAAAGTCCAATAA--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGTCCAATTCTG
TCCAAAGTCCAAA----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTCCAATTCTG----
TGTTCCCATTGTGTACT
A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

HNF4G/MA0484.2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGTCCAATTCTG
TCCAAAGTCCAGA----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T A C G T A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTCCAATTCTG
-AACCAATTAAT
C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGTCCAATTCTG
CAAAGKTCAA-----
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTCCAATTCTG
---CCAATTAA-
C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTCCAATTCTG---
GAAGACCAATTAGCGCT
A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGTCCAATTCTG
---CCAATTAG-
C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTCCAATTCTG
---CCAATTAA-
C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C T G
A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T