Information for 1-GTATAAAHTBTC (Motif 1)

A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
Reverse Opposite:
A C T G G T C A T C G A C G T A C A T G A C G T A G C T A G C T C G T A A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.769
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif350.1
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets105.2 +/- 41.1bp
Average Position of motif in Background95.0 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTATAAAHTBTC---
GTATAAAAGGCGGGG
A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTATAAAHTBTC---
GTATAAAAGGCGGGG
A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0105.1_Arid3a_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTATAAAHTBTC
ACCCGTATCAAATTT-
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTATAAAHTBTC
AATAGGGTATCAATATT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTATAAAHTBTC
AATGTATCAATT---
A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTATAAAHTBTC
-AATAAACAATN
A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTATAAAHTBTC
AATAGGGTATCAATTAT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTATAAAHTBTC
AATGTATCAAT----
A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTATAAAHTBTC
WWATRTAAACAN--
A C G T A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTATAAAHTBTC-
NNTATANATATACN
A C G T A C T G A C G T C G T A A C G T C T G A C T G A C G T A G A T C C G A T A C G T A C G T G T A C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A