Information for 13-ATTGTTAATG (Motif 16)

C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T
p-value:1e-3
log p-value:-7.400e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif57.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background99.5 +/- 87.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:ATTGTTAATG
ATTGTTA---
C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ATTGTTAATG
ATTGTTTAN-
C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATTGTTAATG
ATTGTT----
C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTTAATG
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATTGTTAATG
TATTGTTTATT
A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ATTGTTAATG-
---GKTAATGR
C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTTAATG-
ANNTCTATTGTTCNNNA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTTAATG
NNATNAATTGTTTNN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTTAATG
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------ATTGTTAATG-
GTATCTATTGTTCTTTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A