| p-value: | 1e-4 |
| log p-value: | -1.023e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1.6 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 43.0 +/- 0.0bp |
| Average Position of motif in Background | 20.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ACATGCATAAGT-- AAAATATGCATAATAAA |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACATGCATAAGT --ATGMATATDC |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACATGCATAAGT-- --ATGCATAATTCA |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACATGCATAAGT --ATGAATATTC |
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|
PH0087.1_Irx6/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----ACATGCATAAGT AAAATACATGTAAAAAT |
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|
|
PH0086.1_Irx5/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----ACATGCATAAGT AATATACATGTAAAATT |
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|
POU5F1/MA1115.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ACATGCATAAGT ATATGCAAATT- |
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POU2F2/MA0507.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ACATGCATAAGT- ATATGCAAATNNN |
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PH0082.1_Irx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----ACATGCATAAGT TAAATACATGTAAAATT |
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HLF/MA0043.3/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ACATGCATAAGT- NNGTTGCATAACNN |
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