Information for 22-AAAAGGGTTAAG (Motif 20)

C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background96.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGGGTTAAG
NMMNBAAAGGGTTAA-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AAAAGGGTTAAG
GAAAGAGTTAAA
C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGGTTAAG---
TGAACCGGATTAATGAA
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGGTTAAG---
TGAACCGGATTAATGAA
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAAGGGTTAAG
AAGAGGATTAG-
C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGGTTAAG-
AAAAACGGATTATTG
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAAGGGTTAAG
-AAGGTGTKAA-
C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAAAGGGTTAAG
--VRGGATTARN
C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGGTTAAG----
TGAAGGGATTAATCATC
A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGGGTTAAG----
NANAGGGATTAATTATN
A C G T C G T A C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C