Information for 23-GCTCTCATGC (Motif 36)

A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G C G T A A C T G C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.112e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background86.9 +/- 83.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCTCTCATGC
AGCCACTCAAG-
A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTCTCATGC
AASCACTCAA--
A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTCTCATGC
GCTGTCAA--
A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTCTCATGC--
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTCTCATGC--
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTCTCATGC-
-GACACATGGC
A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C A C G T
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTCTCATGC
RSCACTYRAG-
A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTCTCATGC
CCTGTCAA--
A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTCTCATGC--
GTGCGCATGCGC
A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTCATGC--
AGNGTTCTAATGANN
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A