Information for 20-CACACACATAAG (Motif 19)

A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CACACACATAAG
AGCGGCACACACGCAA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACACACATAAG--
----CAGATAAGGN
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA2/MA0036.3/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CACACACATAAG--
---NNAGATAAGNN
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACACACATAAG
GCCACACCCA----
A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACACACATAAG
GGCCACACCCAN---
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

GATA4/MA0482.2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACACACATAAG---
---NNAGATAAGGNN
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CACACACATAAG--
----NAGATAAGNN
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CACACACATAAG
CGAAGCACACAAAATA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACACACATAAG-
TGCACACACTGAAAA
A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACACACATAAG-
---NVAGATAAGR
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A