Information for 1-TTTAAADGTTTT (Motif 1)

A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A G T C A G T C A A G T C G A C T A C G T A C G T A G C T C G T A C G T A C T G A
p-value:1e-5
log p-value:-1.273e+01
Information Content per bp:1.735
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1178.4
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets120.0 +/- 31.4bp
Average Position of motif in Background99.8 +/- 72.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAADGTTTT--
NNNTTAATTGGTTTTT
A C G T A C G T A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTAAADGTTTT
-NTAATKGTTT-
A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAADGTTTT---
NNANTAACGGTTNNNAN
A C G T A C G T A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

MYBL2/MA0777.1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTAAADGTTTT
GACNGTTTAACGGTT--
A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAADGTTTT---
NNNNTAACGGTTNNNAN
A C G T A C G T A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

BARX2/MA1471.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTTAAADGTTTT-
-NTAATGGTTTTN
A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T
A C G T A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTAAADGTTTT-
NTTAAGTGGTTNN
A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAADGTTTT--
NNTTTTACATGTANNNT
A C G T A C G T A C G T A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTAAADGTTTT
ATTTGAATT----
A C G T A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTTAAADGTTTT-
-AAAACAGGTTTT
A G C T A C G T C G A T C T G A G T C A G T C A C G T A A C T G A C G T A C G T A C G T A G C T A C G T
A C G T T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T