Information for 8-CAGTGATTAT (Motif 22)

A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A C G T A G T C C G T A A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.504e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets172.0 +/- 0.0bp
Average Position of motif in Background88.1 +/- 67.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGATTAT
GCAGTGATTT-
A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CAGTGATTAT-----
TAGTGATCATCATTA
A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

GFI1/MA0038.2/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGATTAT
TGCAGTGATTTN
A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGATTAT
NNNNTGCCAGTGATTG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGATTAT
TGCTGTGATTT-
A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGTGATTAT-
-AGTAATTAAC
A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGTGATTAT-
-GGTAATTAGC
A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

EVX2/MA0888.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGTGATTAT-
-GGTAATTAGC
A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

PITX2/MA1547.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAGTGATTAT
--GGGATTAN
A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGTGATTAT
--RGGATTAR
A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G