Information for 9-ACTTGCCTTC (Motif 19)

C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif33.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background98.8 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCCTTC
NNACTTGCCTT-
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGCCTTC
NNACTTACCTN-
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTTGCCTTC-
--TTGACTTTT
C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACTTGCCTTC-
-----GCTTCC
C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTTGCCTTC
GTACGTGCCC--
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T A C G T

HES6/MA1493.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGCCTTC
AACACGTGCC---
A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTTGCCTTC--
ACTTTCGTTTCT
C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACTTGCCTTC---
AGAAATGACTTCCCT
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTTGCCTTC
RTACGTGC----
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTTGCCTTC
CAGCACCTGCCCC-
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T