| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 70.0 +/- 0.0bp |
| Average Position of motif in Background | 160.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGTAATAAACTC -GTCATAAAAN- |
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HOXA10/MA0899.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGTAATAAACTC GGTAATAAAAA- |
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HOXD9/MA0913.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGTAATAAACTC -GCAATAAAAC- |
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CDX2/MA0465.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGTAATAAACTC AAGCAATAAAAA- |
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PH0046.1_Hoxa10/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGTAATAAACTC-- TAGGTAATAAAATTCA |
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CDX4/MA1473.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGTAATAAACTC GGCAATAAAAC- |
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PH0013.1_Cdx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGTAATAAACTC- AAAGGTAATAAAATTT |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGTAATAAACTC GGCCATAAAAC- |
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PH0012.1_Cdx1/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGTAATAAACTC- TAAGGTAATAAAATTA |
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PH0075.1_Hoxd10/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGTAATAAACTC--- AATGCAATAAAATTTAT |
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