Information for 4-TCATTCTAAGGG (Motif 5)

A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 0.0bp
Average Position of motif in Background111.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCATTCTAAGGG-
-----CTAATKGV
A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCATTCTAAGGG--
AGNGTTCTAATGANN
A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Isl1/MA1608.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCATTCTAAGGG--
---NNCTAATGGNN
A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCATTCTAAGGG-
---TTCTNMGGAA
A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCATTCTAAGGG
NNCTCATTAT-----
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTCTAAGGG
NNCATTCATTCATNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCATTCTAAGGG
CCACATTCCAGG--
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCATTCTAAGGG
-NATTCAAAT--
A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCATTCTAAGGG
CTCATTAAA----
A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCATTCTAAGGG
CCATCAATCAAA---
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T