Information for 3-TCTCTCAAGGGC (Motif 3)

A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCTCTCAAGGGC-
---NTCAAGGTCA
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCTCTCAAGGGC-
---BTCAAGGTCA
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

NR5A1/MA1540.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTCTCAAGGGC--
---GTCAAGGTCAC
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

EBF3/MA1637.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCTCTCAAGGGC--
-TTCCCAAGGGAAT
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCAAGGGC
AGCCACTCAAG---
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTCTCAAGGGC--
-TTCCCAAGGGACT
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCTCTCAAGGGC---
--GCTCAAGGTCACA
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTCTCAAGGGC--
--NBYCAAGGTCAC
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCTCTCAAGGGC---
----TCAAGGTCATA
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TCTCTCAAGGGC---
-----CAAGGHCANV
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G