Information for 9-GAAGGTACACAT (Motif 9)

A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.4/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAAGGTACACAT--
--ATGTAAACATGT
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGGTACACAT-
CAAACGTAAACAAT
A C G T A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

FOXA2/MA0047.3/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAGGTACACAT-
--ATGTAAACATA
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A

FOXK2/MA1103.2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAGGTACACAT-
--ATGTAAACAAG
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G T A C G A T C T A G C G A T G C T A G T C A C T G A G A T C G C T A C G T A T C A G

FOXA3/MA1683.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAAGGTACACAT-
--ATGTAAACATA
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAGGTACACAT---
NNGTATGTGCACATNNN
A C G T A C G T A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAGGTACACAT
-AAAGTAAACA-
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXP1/MA0481.3/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAAGGTACACAT-
--ATGTAAACATA
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G T A C G A T C T A G C G A T G T C A G T C A G C T A A G T C G C T A G C A T G C T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAGGTACACAT
-AAAGTAAACA-
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAAGGTACACAT
----GTAAACAT
A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T