Information for 10-GTAAGTAAGGTC (Motif 11)

A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0072.1_Hoxc8/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTAAGTAAGGTC
TTGGGGTAATTAACGT-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTAAGTAAGGTC---
----CAAAGGTCAAA
A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

LMX1A/MA0702.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTAAGTAAGGTC
NTAATTAA----
A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C
A C G T A G C T C G T A C T G A A C G T A C G T T C G A T C G A A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAAGTAAGGTC
NNNGTAACTANGNNA
A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

HOXB7/MA1501.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAAGTAAGGTC
GGTAATTAAC---
A C G T A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C
T C A G A C T G A G C T G T C A G T C A A C G T G C A T C T G A T C G A T A G C A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTAAGTAAGGTC------
-TATTCAAGGTCATGCGA
A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTAAGTAAGGTC-
-----TRAGGTCA
A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTAAGTAAGGTC-
GTAGTAATTAATGGAA
A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTAAGTAAGGTC
CAGGTAAGTAT----
A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GTAAGTAAGGTC--
------AAGGTCAC
A C T G A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C