Information for 3-TGCTTATTCG (Motif 6)

A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.022e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets162.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCTTATTCG
TATTGTTTATT--
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCTTATTCG
ATGMATATDC-
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCTTATTCG
ATGAATATTC-
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTTATTCG
TGTTTAC---
A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCTTATTCG
TGTTTATTT-
A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCTTATTCG
--CTAATTAG
A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTTATTCG
TGCTGACTCA
A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCTTATTCG
TGTTTAC---
A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTATTCG
TTGTTTAC---
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCTTATTCG----
CACCGCTAATTAGNNGN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T