Information for 23-CTTGCCATTG (Motif 31)

A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G
p-value:1e-2
log p-value:-6.811e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets194.0 +/- 0.0bp
Average Position of motif in Background93.2 +/- 77.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTGCCATTG---
--NNCCATTGTNN
A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCATTG
NNACTTGCCTT--
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTGCCATTG---
--NNCCATTGTNN
A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CTTGCCATTG----
----CCATTGTTYB
A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTTGCCATTG
TACTTGGCAGA-
A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTTGCCATTG---
----CCATTGTTC
A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTGCCATTG------
TGTTCCCATTGTGTACT
A C G T A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

RFX3/MA0798.2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTTGCCATTG--
CGGTTGCTATGGCA
A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTGCCATTG
CTTGGCAA--
A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTTGCCATTG------
----CCATTGTTYYBB
A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G