Information for 9-TCCAATTATCTG (Motif 9)

A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LHX2/MA0700.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCCAATTATCTG
AACCAATTAAT--
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCCAATTATCTG
-CCAATTAA---
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCCAATTATCTG
NCCAATTANC--
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCCAATTATCTG
TCTAATTAAA--
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCCAATTATCTG
-CCAATTAG---
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCCAATTATCTG
-CCAATTAA---
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T

ESX1/MA0644.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCCAATTATCTG
ACCAATTAAC--
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
T C G A G A T C G A T C T C G A G T C A G A C T G A C T G C T A T C G A G T A C A C G T A C G T

LBX2/MA0699.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCCAATTATCTG
GCCAATTAGC--
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCCAATTATCTG
-CCAATTAC---
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T

DLX5/MA1476.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCAATTATCTG
-GCAATTAC---
A C G T A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C T G
A C G T T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T