Information for 5-ACAATTTATGAG (Motif 8)

C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ACAATTTATGAG----
NAATTTTACGAGNTNN
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACAATTTATGAG----
ANATTTTACGAGNNNN
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTTATGAG
TNCNNAACAATTTTTNC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTTATGAG
NNCNNAACAATTNT----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACAATTTATGAG-
---TTTTATKRGG
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACAATTTATGAG
ATAAACAATTAAACA-
A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACAATTTATGAG-
--NTTTTACGAGN
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAATTTATGAG
--NTTTTACGAC
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACAATTTATGAG
--NTTTTATDRG
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G
A C G T A C G T C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACAATTTATGAG-
---TTTTATTRGN
C G T A A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C