Information for 12-ATAATGTCCCTT (Motif 11)

C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATAATGTCCCTT
TCAATGACCTA-
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATAATGTCCCTT
TTTAATGAN----
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ATAATGTCCCTT
GGGAACACAATGTTCCC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATAATGTCCCTT--
--ACTTTCACTTTC
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATAATGTCCCTT-
---CTGTTCCTGG
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATAATGTCCCTT
GGGTACATAATGTTCCC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATAATGTCCCTT
AAGATATCCTT-
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATAATGTCCCTT
NTAATTGC----
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
A C T G A C G T G T C A C G T A A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T

HOXA6/MA1497.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATAATGTCCCTT
NNTAATTACN---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
T A C G G A C T G C A T G C T A C G T A A G C T C A G T T C G A T A G C T G A C A C G T A C G T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATAATGTCCCTT
GTAATTGC----
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T