Information for 6-GGTCAGCTGCAA (Motif 6)

A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGCTGCAA
SSRGCAGCTGCH-
A C G T A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGTCAGCTGCAA
-NNCAGCTGNN-
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
A C G T A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T

MYOG/MA0500.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGTCAGCTGCAA
NNGCAGCTGCNN
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

ASCL1/MA1100.2/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTCAGCTGCAA
-GGCAGCTGCC-
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
A C G T T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTCAGCTGCAA
-AACAGCTGCAG
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGTCAGCTGCAA
---CAGCTGNT-
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGTCAGCTGCAA
NNACAGCTGC--
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTCAGCTGCAA
NAHCAGCTGD--
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGCTGCAA
NNVVCAGCTGBN-
A C G T A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGTCAGCTGCAA-
-AGCAGCTGCTNN
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C