Information for 2-ACATTTAACG (Motif 2)

C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets142.0 +/- 0.0bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL1/MA0776.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACATTTAACG--
ACCGTTAACGGT
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACATTTAACG
ANCGTTTANN-
A C G T C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACATTTAACG---
--NTTTTACGACC
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXB9/MA1503.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACATTTAACG--
--NTTTTACGAC
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXC10/MA0905.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACATTTAACG--
--NTTTTACGAC
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACATTTAACG--
--NTTTTACGAC
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACATTTAACG---
-ANTTTTACGACC
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACATTTAACG
GCACTTAA--
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACATTTAACG---
--NTTTTACGACC
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

OVOL2/MA1545.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACATTTAACG----
-NNNNTAACGGTNN
C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C