Information for 9-GGATCAGAGC (Motif 13)

A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C
p-value:1e-3
log p-value:-7.300e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif63.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background95.1 +/- 75.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGATCAGAGC
NGGATTAN---
A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGATCAGAGC----
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGATCAGAGC----
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGATCAGAGC
TGGAACAGMA-
A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGATCAGAGC-
ANATCAAAGNN
A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

OTX2/MA0712.2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGATCAGAGC
AAGGGATTAGAA-
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGATCAGAGC---
-RHHCAGAGAGGB
A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T
A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATCAGAGC
NGGATTAN---
A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATCAGAGC
GGATTAGC--
A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGATCAGAGC----
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A