Information for 14-GAGGTCACCTAG (Motif 14)

A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets150.0 +/- 0.0bp
Average Position of motif in Background99.5 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCACCTAG
AGRGGTCA-----
A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAGGTCACCTAG
AAGGTCAC----
A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCACCTAG
TRAGGTCA-----
A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCACCTAG
CGAGGTCAC----
A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGGTCACCTAG----
-AGGTCACCCTGACCT
A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTCACCTAG
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTCACCTAG
GKBCARAGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGGTCACCTAG
GAGGTCAT----
A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGGTCACCTAG
-AGGTCA-----
A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTCACCTAG
TCTCAAAGGTCACCTG-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T