Information for 13-AGGAGATTGATA (Motif 13)

C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGATTGATA---
NNANTGATTGATNTTN
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGATTGATA---
NNANTGATTGATNNNN
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGGAGATTGATA-
---TGATKGATGR
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGAGATTGATA--
-NNTGATTGATGNN
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T
A C G T C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AGGAGATTGATA---
-----ATTGATTYND
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGAGATTGATA--
--RTGATTKATRGN
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGAGATTGATA--
--ATGATKGATGRC
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGGAGATTGATA--
----TATCGATNAN
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGGAGATTGATA-
---TGATTGATGA
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGGAGATTGATA
----TATTGAYY
C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C G T C G T A
A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C