Information for 16-GTCTTTCAGG (Motif 17)

A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A C G T A C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.194e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif70.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets166.0 +/- 0.0bp
Average Position of motif in Background100.0 +/- 75.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTCAGG-
TGTCTGDCACCT
A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GTCTTTCAGG--
TTTTTTTTTTTTTTCAGGTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCTTTCAGG-
CTGTCTGTCACCT
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GTCTTTCAGG--
TTTTTTTTTTTTTTCAGGTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCTTTCAGG-
TCCTTTGATGT
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTCAGG---
TNCCTTTGATCTTN
A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTCTTTCAGG
SCTGTCAVTCAV-
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTTTCAGG
TGGTTTCAGT
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

ETV2/MA0762.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCTTTCAGG--
-TATTTCCGGTT
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
A C G T G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTCTTTCAGG
NCTGTCAATCAN-
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A A C T G A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T