Information for 8-GCCTTTGTGAGG (Motif 8)

A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets138.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCCTTTGTGAGG
BCCWTTGTBYKV
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCCTTTGTGAGG
-CCWTTGTY---
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCCTTTGTGAGG
NNCTTTGTTNN-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCTTTGTGAGG
-CCWTTGTYYB-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

SOX4/MA0867.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCTTTGTGAGG
NCCTTTGTTC--
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCCTTTGTGAGG
AGGVNCCTTTGT----
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTTTGTGAGG
-CCTTTGTTTT-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTGTGAGG--
ANTCCTTTGTCTNNNN
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCTTTGTGAGG
-CCATTGTTNY-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTTTGTGAGG
NCCATTGTTC--
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T