Information for 4-ATGTATAATGGG (Motif 5)

C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATGTATAATGGG----
NNTNNACAATGGGANNN
A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATGTATAATGGG
---TTTAATGAN
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATGTATAATGGG
ATGAATATTC--
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATGTATAATGGG--
CAATGCATTGTGGGTA
A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Isl1/MA1608.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATGTATAATGGG-
--NNCTAATGGNN
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

BSX/MA0876.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATGTATAATGGG
----NTAATTGG
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATGTATAATGGG--
----ATAATGAGGT
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATGTATAATGGG
AAAATATGCATAATAAA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATGTATAATGGG
----NTAATTGN
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGTATAATGGG-----
AAACATAATGAGGTTGC
C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C