Information for 5-GAAGAAAATAGT (Motif 6)

A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAAGAAAATAGT
-CCAAAAATAG-
A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAAGAAAATAGT
WAAGTAAAYA--
A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GAAGAAAATAGT
TACTGGAAAAAAAA---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAAGAAAATAGT
GCTAAAAATAGC
A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAGAAAATAGT-
ATGCTAAAAATAGAA
A C G T A C G T A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGAAAATAGT
DCYAAAAATAGM
A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAGAAAATAGT-
-AAACAAACATTC
A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGAAAATAGT
AAAGTAAACA--
A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAGAAAATAGT-
GTTAAAAAAAAAAATTA
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

MEF2A/MA0052.4/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAATAGT--
TTCTAAAAATAGAAA
A C G T A C T G C G T A C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A