Information for 17-CAGTTCAGATGA (Motif 15)

A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background176.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CAGTTCAGATGA-
---ACCAGATGGC
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAGTTCAGATGA-----
AAGGCCAGATGGTCCGG
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGTTCAGATGA---
-NNATCAGGTGATNN
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

TWIST1/MA1123.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGTTCAGATGA--
-ATTCCAGATGTTT
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T
A C G T C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTCAGATGA
AAAGTTCAT----
A C G T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGTTCAGATGA
TGAGTTCA-----
A C G T A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.3/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGTTCAGATGA---
-NNGTCACATGACNN
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGTTCAGATGA--
-GGAACAGATGGCA
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T
A C G T C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

USF2/MA0526.3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGTTCAGATGA---
-NNGTCACATGACNN
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

Ptf1a/MA1618.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGTTCAGATGA---
--AAACAGATGTTTA
A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A