Information for 2-GCTTATAGAC (Motif 13)

A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-9.497e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background88.2 +/- 77.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTTATAGAC--
GGTTAGAGACCT
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTATAGAC--
CCTTTTATAGNC
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTTATAGAC-
---TATTGAYY
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTTATAGAC-
-CGTCTAGACA
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTATAGAC
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTATAGAC
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCTTATAGAC-
---TCTAGACA
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

SMAD5/MA1557.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTTATAGAC-
-TGTCTAGACA
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T
A C G T G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCTTATAGAC---
CTAAGGTTCTAGATCAC
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCTTATAGAC--
BCNGGTTCTAGANCN
A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T