| p-value: | 1e-4 |
| log p-value: | -9.834e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 5.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 193.0 +/- 0.0bp |
| Average Position of motif in Background | 81.7 +/- 69.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TCTATAAAACAC- CTACCAATAAAATTCT |
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POL012.1_TATA-Box/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCTATAAAACAC---- -GTATAAAAGGCGGGG |
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TBP/MA0108.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCTATAAAACAC---- -GTATAAAAGGCGGGG |
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HOXA13/MA0650.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCTATAAAACAC CCCAATAAAAC-- |
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HOXD13/MA0909.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCTATAAAACAC CCCAATAAAAC-- |
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|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCTATAAAACAC NGYCATAAAWCH- |
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HOXB13/MA0901.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCTATAAAACAC AACCAATAAAATTT |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCTATAAAACAC KGCCATAAAA--- |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCTATAAAACAC CYHATAAAAN-- |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCTATAAAACAC GGCCATAAAAC-- |
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