Information for 12-TAACATAGCC (Motif 28)

A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A
p-value:1e-3
log p-value:-7.989e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background123.0 +/- 72.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAACATAGCC
AAAACAAAGAA
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAACATAGCC
AAAAATAACAAACGG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TAACATAGCC
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAACATAGCC
DCYAAAAATAGM-
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAACATAGCC
KCCAAAAATAGC-
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAACATAGCC
CCAAAAATAG--
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAACATAGCC
GAACAAAGGG
A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAACATAGCC
GCTAAAAATAGC-
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAACATAGCC
ATTTGCATA---
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAACATAGCC--
-AAGATATCCTT
A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T