Information for 5-TGTTCATTAGAC (Motif 11)

A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB4/MA1499.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTTCATTAGAC
--ATCATTAG--
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTTCATTAGAC
--GTCATTAA--
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T A C G T T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTTCATTAGAC
--ATCATTAG--
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G A C G T A C G T

ARGFX/MA1463.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTTCATTAGAC
-TTTAATTAGN-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T C A G T G A C T G A C T C T G A C G T A A C G T C A G T C T G A C T A G G T C A A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGTTCATTAGAC
--GTCATTAG--
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G A C G T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTTCATTAGAC
-ATCCATTAGCA
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTTCATTAGAC
NGCTAATTAG--
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A T G C T A C G A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTTCATTAGAC
--NTAATTAG--
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTTCATTAGAC
-GGTAATTAGC-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T

mix-a/MA0621.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTTCATTAGAC
AATTAATTAGT-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T