Information for 4-CTATTGTCTTGA (Motif 5)

A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.0 +/- 0.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX15/MA1152.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTATTGTCTTGA
CTATTGTTTT--
A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTATTGTCTTGA
CCATTGTTYYBB
A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTATTGTCTTGA
NCCATTGTTY---
A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTATTGTCTTGA
CCATTGTTTT--
A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTATTGTCTTGA
BCCWTTGTBYKV-
A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTATTGTCTTGA
CTCATTGTC----
A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTATTGTCTTGA--
CNNNTATTGTTCNNNNN
A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTATTGTCTTGA
NNNCCATTGTGTNAN
A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Smad4/MA1153.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTATTGTCTTGA
----TGTCTAGA
A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTATTGTCTTGA
CCATTGTTYB--
A G T C A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T