Information for 15-CCTGATGGAA (Motif 29)

A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.322e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background70.3 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CCTGATGGAA-
-ATGATGCAAT
A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCTGATGGAA-
-MTGATGCAAT
A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

ATF4/MA0833.2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTGATGGAA---
AAATGATGCAATAA
A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A

NFATC4/MA1525.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCTGATGGAA---
---AATGGAAAAT
A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

TFAP2A/MA0003.4/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTGATGGAA-
NNGCCTGAGGCANN
A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTGATGGAA---
---NNTGGAAANN
A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTGATGGAA---
---AATGGAAAAT
A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Isl1/MA1608.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTGATGGAA
NNCTAATGGNN
A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTGATGGAA----
AAATGATGCAATCAT
A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTGATGGAA--
--TGATKGATGR
A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G