Information for 3-TAATGTGTTGAT (Motif 3)

A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAATGTGTTGAT
--ATGGGGTGAT
A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTGTTGAT
NTAATGAGCT---
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TAATGTGTTGAT
--AGGTGTTAAT
A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTGTTGAT---
NNNNTTTGTTTACNNT
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAATGTGTTGAT
ATAATGAGGT---
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAATGTGTTGAT---
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAATGTGTTGAT
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAATGTGTTGAT---
AAAWWTGCTGACWWD
A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAATGTGTTGAT
-AAGGTGTKAA-
A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TAATGTGTTGAT
AAATTAATTGATTTNG
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G