Information for 1-TCAAAGCGCA (Motif 4)

A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.022e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7/MA0769.2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TCAAAGCGCA
ANATCAAAGNN--
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TCAAAGCGCA
ACATCAAAGG---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TCAAAGCGCA-
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGCGCA
CANAGNNCAAAGTCCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCAAAGCGCA
ASATCAAAGG---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGCGCA-
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TCAAAGCGCA
AAAGATCAAAGGAA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCAAAGCGCA--
TCCAAAGTCCAAA
A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCAAAGCGCA-
-CAAAGGTCAG
A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

HNF4G/MA0484.2/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCAAAGCGCA--
TCCAAAGTCCAGA
A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C T G A G T C C G T A A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A