Information for 1-CTTGCAGCCTGT (Motif 3)

A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN4/MA1155.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTGCAGCCTGT---
TTTTCAGTGTGTGCA
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

GRHL2/MA1105.2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTTGCAGCCTGT---
---NAAACCTGTTTN
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CTTGCAGCCTGT-
-------GCTGTG
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTTGCAGCCTGT
---BCAGACWA-
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTGCAGCCTGT
-TTCCCGCCWG-
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTGCAGCCTGT
-TTGCAACATN-
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTTGCAGCCTGT
----CAGCC---
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTGCAGCCTGT
NANTGCSGCA---
A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A A C G T A C G T A C G T

E2F6/MA0471.2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCAGCCTGT
NNTTCCCGCCNNN
A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
A T G C A G T C A G C T A G C T A T G C T A G C G A T C C A T G A T G C A G T C G A T C A G T C A T G C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTTGCAGCCTGT-
---ACTTCCTGTT
A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T