Information for 1-AGCCACGAGT (Motif 1)

C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C T G A C G T A C T G A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGCCACGAGT
-GCCACGTGT
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCCACGAGT-
NHRTCACGACDN
A C G T C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

HES6/MA1493.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCACGAGT-
-GGCACGTGTT
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCCACGAGT
-NCCACGTG-
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCCACGAGT-
-GACACGTGCC
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCCACGAGT-
-GGCACGTGTC
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

HES1/MA1099.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGCCACGAGT-
-GNCACGTGCC
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T T A C G T A G C G T A C C T G A A G T C C T A G G A C T C A T G G T A C T G A C

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGCCACGAGT-
-GGCACGTGTC
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

MYC/MA0147.3/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCCACGAGT--
GGCCACGTGCCC
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGCCACGAGT
--GCACGTGT
C G T A A C T G A G T C A G T C C G T A A G T C A C T G C G T A A C T G A C G T
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T