Information for 13-TCATGGTCTGCA (Motif 13)

A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCATGGTCTGCA---
CCATTGTATGCAAAT
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCATGGTCTGCA
TTTTCAGTGTGTGCA
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCATGGTCTGCA
AAGTTCAAGGTCAGC-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCTGCA
NTCAAGGTCA---
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCATGGTCTGCA
---TWGTCTGV-
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCTGCA
BTCAAGGTCA---
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCATGGTCTGCA-----
NCTANGTCAGCAAATTT
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCATGGTCTGCA
-TWVGGTCCGC-
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
A C G T A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCTGCA
CTCATTGTC----
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

ESRRA/MA0592.3/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCATGGTCTGCA
GCTCAAGGTCACA-
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G T A
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A A C G T