Information for 11-TAATTGTTAGGC (Motif 11)

A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---TAATTGTTAGGC
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAATTGTTAGGC-
AAAATTGTTATGAA
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TAATTGTTAGGC-
GGAAAAATTGTTAGGAA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TAATTGTTAGGC
--ATTGTTA---
A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGTTAGGC
NTAATKGTTT---
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TAATTGTTAGGC
-CATTGTTCGG-
A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TAATTGTTAGGC
NNATNAATTGTTTNN-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGTTAGGC
NNTAATTGGNN---
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TAATTGTTAGGC
--ATTGTT----
A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

SOX12/MA1561.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TAATTGTTAGGC
-NATTGTTCGGT
A C G T C G T A C G T A A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C
A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T