| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 6.0 +/- 0.0bp |
| Average Position of motif in Background | 192.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTTTGAATTGGC- NNTGTTTATTTTGGCA |
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LIN54/MA0619.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTTTGAATTGGC ATTTGAATT--- |
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|
CHR(?)/Hela-CellCycle-Expression/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTTTGAATTGGC -TTTGAAACCG- |
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|
PB0068.1_Sox1_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTTTGAATTGGC- NNNTATTGAATTGNNN |
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|
NFIX/MA0671.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 6 |
| Orientation: | reverse strand |
| Alignment: | GTTTGAATTGGC--- ------NTTGGCANN |
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|
|
PH0114.1_Nkx2-5/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTTTGAATTGGC--- AAATTCAAGTGGNTTN |
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|
NFIA/MA0670.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | GTTTGAATTGGC--- -----NNTTGGCANN |
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|
|
PH0113.1_Nkx2-4/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTTTGAATTGGC--- AATTTCAAGTGGCTTN |
|
|
|
LHX2/MA0700.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTTTGAATTGGC- --NNTAATTGGNN |
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|
PH0111.1_Nkx2-2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTGAATTGGC--- NANTTTCAAGTGGTTAN |
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