| p-value: | 1e-6 |
| log p-value: | -1.391e+01 |
| Information Content per bp: | 1.660 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 36.36% |
| Number of Background Sequences with motif | 574.8 |
| Percentage of Background Sequences with motif | 0.73% |
| Average Position of motif in Targets | 109.0 +/- 28.7bp |
| Average Position of motif in Background | 97.0 +/- 67.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAGGACAAGYAA TRAGGTCA----- |
|
|
|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGGACAAGYAA CAAAGKTCAA---- |
|
|
|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGACAAGYAA AAGGTCAC---- |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGGACAAGYAA -AGGTCA----- |
|
|
|
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CAGGACAAGYAA NBYCAAGGTCAC---- |
|
|
|
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGGACAAGYAA- -AGGTCAAGGTCA |
|
|
|
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGGACAAGYAA NACAGGAAAT---- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CAGGACAAGYAA ATCAAGGTCA----- |
|
|
|
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAGGACAAGYAA CAAGGHCANV--- |
|
|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAGGACAAGYAA CAAAGGTCAAA--- |
|
|
|