Information for 19-ATCTAAGTAC (Motif 29)

C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.027e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background120.8 +/- 51.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-ATCTAAGTAC------
NATTTAAGTACTTANNA
A C G T C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

HOXD3/MA0912.2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATCTAAGTAC
--CTAATTAC
C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C
A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATCTAAGTAC-------
TTCNAAGTACTTNNNNN
C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATCTAAGTAC------
NATTTAAGTACTTNAAA
A C G T C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCTAAGTAC
NDGTAATTAC
C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C
T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATCTAAGTAC
--TTAAGTGC
C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATCTAAGTAC--
--TTAAGTGCTT
C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATCTAAGTAC---
CTGAGCTAATTACCGT
A C G T A C G T A C G T C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

TCF7/MA0769.2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATCTAAGTAC
ANATCAAAGNN-
A C G T A C G T C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCTAAGTAC------
CTTTAAGTACTTAATG
C G T A A C G T A G T C A C G T C G T A C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G