Information for 9-CAGAGCACATGC (Motif 9)

A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C G T A G T C A C G T A C T G
p-value:1e-4
log p-value:-9.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CAGAGCACATGC-
---GACACATGGC
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGAGCACATGC--
--SNGCACCTGCHS
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGAGCACATGC---
--CGGCACCTGCCCC
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGAGCACATGC---
--CAGCACCTGCCCC
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SOHLH2/MA1560.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGAGCACATGC-
---CGCACGTGCA
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A

PB0043.1_Max_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGCACATGC---
CCNNANCACGTGGTCN
A C G T A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

TCF3/MA0522.3/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGAGCACATGC--
---CGCACCTGCCC
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGAGCACATGC
---ACCACGTG-
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGAGCACATGC
--NGKCACGTGM
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C
A C G T A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGAGCACATGC--
---CGCACCTGCCG
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G