Information for 5-ATGCCATCTA (Motif 12)

C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background104.8 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATGCCATCTA
ATGCCAACC-
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATGCCATCTA
-TGCCAGCB-
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGCCATCTA---
ACTATGCCAACCTACC
A C G T A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATGCCATCTA---
NNNCCATCTGTNN
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGCCATCTA--
--GCCATCTGTT
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGCCATCTA----
-NNCCATCTGTNNN
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGCCATCTA
-TGTCANYT-
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:8
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ATGCCATCTA-----
NNNNNCGATANNATCTNNNNAN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCCATCTA-----
NDBAGATRWTATCTVNNNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGCCATCTA
ATGCCCACC-
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C G T C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T