Information for 4-CATTTGCCTTGG (Motif 4)

A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGCCTTGG
NNACTTGCCTT--
A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGCCTTGG
CTCATTTGCATW--
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTTGCCTTGG
TTCATTTGCATAT-
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTTGCCTTGG
-BNTGDCCTTG-
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTTGCCTTGG
-ATTTGCATAT-
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTTGCCTTGG--
NNTGTTTATTTTGGCA
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATTTGCCTTGG-
---TGACCTTGAN
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Ebf2/MA1604.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CATTTGCCTTGG---
--NNTCCCTTGGGAN
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

POU2F3/MA0627.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGCCTTGG
NNATTTGCATATN
A C G T A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATTTGCCTTGG-
---TGACCTTGAV
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A