Information for 1-TGAACCGAAC (Motif 1)

A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A C T G A C T G A C G T A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGAACCGAAC----
---ACCGAACAATG
A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAACCGAAC
TGAACTCA--
A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGAACCGAAC
--AACCGANA
A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGAACCGAAC--
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAACCGAAC----
ATAAACCGAAACCAA
A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAACCGAAC---
GAGAACCGAAACTG
A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAACCGAAC
TGGAACAGMA-
A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

IRF5/MA1420.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAACCGAAC--
CCGAAACCGAAACT
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

IRF6/MA1509.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGAACCGAAC--
---ACCGAAACT
A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGAACCGAAC--
NNCNTGACCCCGCTCT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T