Information for 12-GGTAAGAGAACA (Motif 13)

A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C G T A C G T C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background101.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTAAGAGAACA
AAGATAAGATAACA
A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTAAGAGAACA
GCTAARTAAACA
A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTAAGAGAACA
CAGGTAAGTAT---
A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTAAGAGAACA
AGGGGTCAGAGGTCA
A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTAAGAGAACA
GAGGTCAAAGGTCA
A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTAAGAGAACA
GGTTAGAGACCT
A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

GATA6/MA1104.2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGTAAGAGAACA
NNAGATAAGATAN--
A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGTAAGAGAACA
--AAAGTAAACA
A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGTAAGAGAACA
--AAAGTAAACA
A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTAAGAGAACA
VNAGGKCAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C T G C G T A A C T G C G T A C G T A A G T C C G T A
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A