Information for 20-GATCCATGACAT (Motif 21)

A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GATCCATGACAT
-----TTGACAG
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GATCCATGACAT
---NCGTGACN-
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATCCATGACAT-
ACATTCATGACACG
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GATCCATGACAT-
-----TTGACAGG
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

CREB1/MA0018.4/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GATCCATGACAT-----
----NATGACATCANNN
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATCCATGACAT
DGATCRATAN---
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATCCATGACAT-
AAGGTCATTGACCTT
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T
C T G A C T G A A C T G C T A G A C G T A G T C T C G A A C G T A G C T T C A G G T C A A G T C T G A C G A C T G A C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATCCATGACAT
ATGATKGATGRC--
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATCCATGACAT-
NAGGTCAATGACCTC
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GATCCATGACAT------
-----ATGACATCATCNN
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T