Information for 18-GTCCTCTGGC (Motif 33)

A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.184e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background105.1 +/- 69.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTCCTCTGGC--
ATTGCCTCAGGCCA
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTCTGGC--
NNCGCCTCAGGCNN
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTCTGGC--
NTGCCCTTGGGCGN
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTCTGGC--
NTGCCCANNGGTNA
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTCCTCTGGC--
--GGTCTGGCAT
A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTCCTCTGGC
ATGCCCTGAGGC
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCCTCTGGC
NNCATCTGNN
A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTCTGGC---
TGACCTTTGCCCTA
A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTCTGGC
WTGSCCTSAGGS
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCCTCTGGC---
TGACCTTTGCCCCA
A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A