Information for 3-TTTCTAGGCTGG (Motif 4)

A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 0.0bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF136/MA1588.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTCTAGGCTGG-
GAATTCTTGGTTGAC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T
T C A G C G T A T C G A C G A T A G C T G A T C A G C T C A G T C T A G C T A G G A C T C A G T C T A G C T G A G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TTTCTAGGCTGG
----TWGTCTGV
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTAGGCTGG
CTGTTGCTAGGS---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTCTAGGCTGG----
CTACTAGGATGTNNTN
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTCTAGGCTGG
TGTCTAGACG--
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTAGGCTGG
NNCGTTGCTATGGNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTCTAGGCTGG
TGTCTAGACA--
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTAGGCTGG
NCCGTTGCTANGNGN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T

ZBTB12/MA1649.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTAGGCTGG
NNGTTCCAGNN---
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTCTAGGCTGG--
GGGGCTYGKCTGGGA
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A