Information for 10-ACTTTATGATGC (Motif 13)

C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTTTATGATGC
NTTTTACGAC--
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACTTTATGATGC----
-CTTTGTTATGCAAAT
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTATGATGC
DGWTTTATGRCN-
A C G T C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTATGATGC--
NNCTNAATTATGANN
A C G T C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTTTATGATGC
NTTTTATGAC--
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTTTATGATGC
NTTTTACGAC--
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTTTATGATGC
NTTTTACGAC--
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACTTTATGATGC---
-----MTGATGCAAT
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

HOXC9/MA0485.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTTTATGATGC
NTTTTACGAC--
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACTTTATGATGC------
---AAATGATGCAATCAT
C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T