Information for 20-CATAATTCACAT (Motif 20)

A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CATAATTCACAT
TATCATAATTAAGGA
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CATAATTCACAT
ATGCATAATTCA---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CATAATTCACAT
GTCATAAATCATT-
A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CATAATTCACAT
NNCCATAAATCATNN
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CATAATTCACAT
TCCAATCCACA-
A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATAATTCACAT
GTCATCAATCATT-
A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATAATTCACAT
NCYATMAATCAY--
A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CATAATTCACAT
GGCCATAAATCA---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATAATTCACAT--
--TAATTTGCATAA
A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATAATTCACAT--
--TAATTTGCATAA
A G T C C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A