Information for 1-GCCTAACC (Motif 15)

A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A G T C
p-value:1e-2
log p-value:-6.716e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif113.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets13.0 +/- 0.0bp
Average Position of motif in Background85.9 +/- 78.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GCCTAACC--
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

PAX5/MA0014.3/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCTAACC--
GAGCGTGACCCC
A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAACC--
NNACTTACCTN
A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTAACC-
-GCTAATCC
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCTAACC-------
-NNTAATCCNGNCNN
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTAACC--
GCCACACCCA
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCTAACC
AGGCCTAG--
A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCTAACC--
--YTAATCCY
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCTAACC---
-GCTAATCCCC
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCTAACC---
-CCTAATCCGC
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C