Information for 3-ACCTTCGTAT (Motif 3)

C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background143.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACCTTCGTAT------
TNNTTTCGTATTNNANN
A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACCTTCGTAT--
ACTTTCGTTTCT
C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACCTTCGTAT-
-CCTTTGTTTT
C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACCTTCGTAT
-GCTTCC---
C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACCTTCGTAT
ATGACCTTGA---
A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACCTTCGTAT
NNTGACCTTTN---
A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACCTTCGTAT-
NNCTTTGTTNN
C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACCTTCGTAT
NTGACCTTGA---
A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACCTTCGTAT--
NTGACCTTTGGACCC
A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G C A T A G C T C T A G C T A G G T C A G T A C A G T C A G T C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACCTTCGTAT
GTGACCTTGRVN-
A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T C G T A A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C A C G T