Information for 3-AGGCCTCAAT (Motif 6)

C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background100.8 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTCAAT
CNAGGCCT----
A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTCAAT
CTAGGCCT----
A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGCCTCAAT
KGGCCYCWTD
C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AGGCCTCAAT
GGGGCCGAGGCCTG---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGCCTCAAT-
AAAACCTCAAAT
A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGCCTCAAT---
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGCCTCAAT-----
TCACCCATCAATAAACA
A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCCTCAAT------
GAAGATCAATCACTAA
C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGCCTCAAT-
---RRTCAATA
C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGCCTCAAT--
ARGAGGMCAAAATGW
A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T