Information for 25-GTAGGTCTCTTA (Motif 27)

A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.121e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTAGGTCTCTTA--
--AGGTCTCTAACC
A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTAGGTCTCTTA
ATAGTAGGTG-----
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTAGGTCTCTTA-------
----GACTTTTAWTTTGAA
A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGTCTCTTA---
TNNNNGGTGTCATNTNT
A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GTAGGTCTCTTA
GCACAYAGTAGGKCY----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTAGGTCTCTTA
CNAGGCCT----
A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGTCTCTTA
TATAAGTAGGTCAA---
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTAGGTCTCTTA
ATAAGTAGGTCA----
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTAGGTCTCTTA
AAYTAGGTCA----
A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTAGGTCTCTTA
AAYTAGGTCA----
A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T