Information for 2-GCTGCAAGGAGA (Motif 5)

A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCAAGGAGA--
KGTTGCTAGGMAACA
A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCTGCAAGGAGA--
----CAAGGHCANV
A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCTGCAAGGAGA
NATGTTGCAA-----
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCAAGGAGA
TGCSGCANTN---
A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A
A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G A C G T A C G T A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCAAGGAGA
NNTGCGGCAANNN--
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCAAGGAGA------
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

NR5A1/MA1540.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTGCAAGGAGA-
--GTCAAGGTCAC
A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTGCAAGGAGA
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCAAGGAGA------
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTGCAAGGAGA
--BTCAAGGTCA
A C T G A G T C A C G T A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A