Information for 12-CTTGAGAGTG (Motif 15)

A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C T G
p-value:1e-3
log p-value:-7.705e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif42.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background91.3 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTGAGAGTG-
CTTGAGTGGCT
A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTGAGAGTG
NNTTGAGTGNN
A C G T A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

MSANTD3/MA1523.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTTGAGAGTG---
---GTGAGTGNAC
A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAGAGTG
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTGAGAGTG
BTBRAGTGSN
A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTGAGAGTG--
NNNACCGAGAGTNNN
A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTGAGAGTG
CTYRAGTGSY
A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

NKX2-2/MA1645.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGAGTG--
NNNTTGAGTGGNNN
A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTGAGAGTG-
-TTGAGTGSTT
A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTGAGAGTG
-TTGACAGC-
A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T