Information for 2-GACCGAGAAT (Motif 2)

A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C A C G T A G T C A C T G A C T G A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 0.0bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--GACCGAGAAT---
GNNACCGAGAATNNN
A C G T A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--GACCGAGAAT---
TTGACCGAGAATTCC
A C G T A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GACCGAGAAT---
NNNACCGAGAGTNNN
A C G T A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACCGAGAAT--
GTCAACCAAGAATTC
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

IRF6/MA1509.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GACCGAGAAT
-ACCGAAACT
A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T
A C G T T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACCGAGAAT-
AACCGGAAATA
A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACCGAGAAT
NNHYTGACCTAGWTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GACCGAGAAT-----------
TGCCNACCWAGAATACTDTATCMAR
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACCGAGAAT
TGACCTTGAT-
A C G T A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

FLI1/MA0475.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACCGAGAAT-
-ACCGGAAGTG
A C T G C G T A A G T C A G T C A C T G C G T A A C T G C G T A C G T A A C G T A C G T
A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T T C A G