Information for 2-GTTGATAGGC (Motif 15)

A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T C G T A A C G T A G T C C G T A C G T A A G T C
p-value:1e-4
log p-value:-9.246e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background123.4 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTGATAGGC--
NCCGTTGCTANGNGN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTTGATAGGC
CTGTTGCTAGGS
A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTGATAGGC--
NNCGTTGCTATGGNN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTGATAGGC----
KGTTGCTAGGMAACA
A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTTGATAGGC
GGTGYTGACAGS-
A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGATAGGC------
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTTGATAGGC
-TTGACAGC-
A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTGATAGGC-
NCTGATTGGNN
A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A C G T
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTTGATAGGC---
NNNNGTTGATTGGGTCG
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTGATAGGC
GTTAATGGCC
A C T G A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C