Information for 7-TTTATACCAA (Motif 8)

A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A
p-value:1e-2
log p-value:-6.516e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif138.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background99.4 +/- 73.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.73
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATACCAA
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.73
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATACCAA
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTATACCAA
NTTTTATGAC--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTATACCAA
TTTTATGGCM-
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C A C G T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTATACCAA
GTTTTATGGCC-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C A C G T

CDX4/MA1473.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTATACCAA
GTTTTATTGCC-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTATACCAA
DGWTTTATGRCN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTATACCAA
NTTTTATTGC--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTATACCAA
NTTTTATTGCNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTATACCAA---
NTTNAGAACAATTA
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A