Information for 8-CAGCCAGTCTCC (Motif 8)

A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAGTCTCC
ACTAGCCAATCA--
A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAGTCTCC
BCAGACWA-----
A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGCCAGTCTCC
CAGCC-------
A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CAGCCAGTCTCC---
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAGTCTCC
CCAGACAG-----
A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAGTCTCC
SCTGTCAVTCAV-
A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CAGCCAGTCTCC
TACGCCCCGCCACTCTG-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGCCAGTCTCC------
-TACGAGACTCCTCTAAC
A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAGCCAGTCTCC
ATGCCAGACN--
A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAGTCTCC
NCTGTCAATCAN-
A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T