| p-value: | 1e-5 |
| log p-value: | -1.288e+01 |
| Information Content per bp: | 1.698 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 45.45% |
| Number of Background Sequences with motif | 1790.0 |
| Percentage of Background Sequences with motif | 2.28% |
| Average Position of motif in Targets | 120.0 +/- 42.2bp |
| Average Position of motif in Background | 98.3 +/- 69.2bp |
| Strand Bias (log2 ratio + to - strand density) | -2.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0064.1_Sox14_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AACTTATNATAA-- GCTAATTATAATTATC |
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PB0079.1_Sry_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AACTTATNATAA-- TATAATTATAATATTC |
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PB0069.1_Sox21_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AACTTATNATAA-- NNTAATTATAATNANN |
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POU3F3/MA0788.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AACTTATNATAA- AAATTAGCATAAT |
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PB0174.1_Sox30_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AACTTATNATAA-- TAAGATTATAATACGG |
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|
|
PB0187.1_Tcf7_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AACTTATNATAA-- NNNTTTNTAATACNG |
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|
POU3F1/MA0786.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AACTTATNATAA TAATTTGCATAA |
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|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | AACTTATNATAA--- -----GTCATAAAAN |
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POU2F1/MA0785.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AACTTATNATAA- -AATTTGCATANT |
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POU3F2/MA0787.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AACTTATNATAA TAATTTGCATAA |
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