Information for 6-TTTCTAATCAAC (Motif 6)

A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A C G T A C G T C G T A A C T G C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background157.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTCTAATCAAC
-TTCTAATCTAT
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C
A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

ARGFX/MA1463.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTCTAATCAAC
--TCTAATTAAA
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C
A C G T A C G T C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTAATCAAC---
NNNTTTTAATTAANNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTAATCAAC
NNNTTTNTAATACNG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTCTAATCAAC----
CGACCCAATCAACGGTG
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTTCTAATCAAC
---CCAATCAA-
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTTCTAATCAAC---
---SSAATCCACANN
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTCTAATCAAC-
--NCTAATTAANN
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C A C G T
A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTAATCAAC---
NNTTATTAATTAATNCN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTTCTAATCAAC
---CTAATTAG-
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T