Information for 25-GGNTTAASCYAA (Motif 31)

A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
Reverse Opposite:
C G A T C A G T C T A G C T A G T A G C G A C T A C G T C G T A C G T A A C G T A T G C T A G C
p-value:1e-3
log p-value:-7.302e+00
Information Content per bp:1.665
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif5753.4
Percentage of Background Sequences with motif7.34%
Average Position of motif in Targets71.9 +/- 45.5bp
Average Position of motif in Background99.0 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGNTTAASCYAA
GGATTAGC----
A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGNTTAASCYAA
CGGATTAN-----
A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGNTTAASCYAA
GGGATTANN----
A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGNTTAASCYAA
VRGGATTARN----
A C G T A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGNTTAASCYAA
NGGATTAN-----
A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GGNTTAASCYAA
CGTTGGGGATTAGCCT--
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGNTTAASCYAA
NNGGATTAGN----
A C G T A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGNTTAASCYAA
RGGATTAR-----
A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGNTTAASCYAA
GNGGATTAGN----
A C G T A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GGNTTAASCYAA
TGAACCGGATTAATGAA-
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T C G G T C A C G A T A C G T C G T A C T G A A T C G G A T C A G T C G C T A C G T A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T