Information for 3-GAATACTACA (Motif 14)

A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.671e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background98.4 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAATACTACA
ATGCATAATTCA
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAATACTACA---
CATACAATACGAAATAA
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAATACTACA---
-NWAACCACADNN
A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAATACTACA---
ATGAATWATTCATGA
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAATACTACA---
TTATTAGTACATAN
A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GAATACTACA---
AADGAGVCANYASTACAGNC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-10
Orientation:reverse strand
Alignment:----------GAATACTACA-----
TGCCNACCWAGAATACTDTATCMAR
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAATACTACA--
--AAACCACAGC
A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GAATACTACA
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GAATACTACA
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A G T C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T