Information for 1-TTAAAAACTACC (Motif 2)

A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background189.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTAAAAACTACC
CCGTATTATAAACAA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTAAAAACTACC-
AGTTAATGATTAACT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

PH0172.1_Tlx2/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TTAAAAACTACC
TAATTAATTAATAACTA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTAAAAACTACC
TTAATNATTAAC
A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTAAAAACTACC
GGTTAAACATTAA-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAAACTACC
GTTAATNATTAAC
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C

ZNF384/MA1125.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTAAAAACTACC
TTTAAAAAAAAA--
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAAACTACC
NATTCAAAT-----
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAAAAACTACC
ATTAAA-------
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAAAAACTACC
GATACAAAGTATC
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C A C G T C G T A A G T C A G T C
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C