Information for 9-CAAGTCCTTC (Motif 18)

A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.400e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif57.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background96.9 +/- 70.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAAGTCCTTC---
CTTTAAGTACTTAATG
A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTCCTTC---
NATTTAAGTACTTNAAA
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTCCTTC---
NATTTAAGTACTTANNA
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAAGTCCTTC----
TTCNAAGTACTTNNNNN
A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAAGTCCTTC
CNAGGCCT--
A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAAGTCCTTC-
-----GCTTCC
A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTCCTTC
TTAAGTGCTT-
A C G T A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAGTCCTTC-
-CNGTCCTCCC
A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAGTCCTTC
CTAGGCCT--
A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTCCTTC
ACCACATCCTGT
A C G T A C G T A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A G T C
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T