Information for 19-CAGGGAGGGTAA (Motif 19)

A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C A G T C A C G T A G T C A G T C A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background134.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGGGAGGGTAA--
GTATTGGGTGGGTAATT
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAGGGAGGGTAA
RHHCAGAGAGGB---
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T

MAZ/MA1522.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGGGAGGGTAA
-GGGGAGGGGNN
A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
A C G T T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

ZNF148/MA1653.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGGGAGGGTAA
GGGGGAGGGGNG
A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
T A C G T A C G C T A G T C A G T A C G G T C A A T C G A T C G T A C G T A C G T A C G T C A G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGAGGGTAA-
TCAGNGAGCGTGAC
A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

ETV4/MA0764.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGGAGGGTAA
ACAGGAAGTG---
A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGAGGGTAA--
NATNGGGNGGGGANAN
A C G T A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGGGAGGGTAA
-GGGGNGGGGC-
A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGGGAGGGTAA
TGGGGAAGGGCM
A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

E2F6/MA0471.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGGGAGGGTAA-
GGGGGCGGGAAGG
A G T C C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A C G T A A C G T
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G