Information for 13-TTAGCTTTATGT (Motif 13)

A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A
p-value:1e-4
log p-value:-9.497e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background41.5 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAGCTTTATGT--
--DGWTTTATGRCN
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAGCTTTATGT--
AAATGATTTATGGCT
A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

PBX2/MA1113.2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTAGCTTTATGT-
NNTGATTTATGNN
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTAGCTTTATGT----
ANTAATTTTATGGCCGN
A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTAGCTTTATGT--
---GTTTTATGGCC
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTAGCTTTATGT
TGACCTTTNCNT
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAGCTTTATGT-
NNTGATTGATGNN
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

CDX4/MA1473.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTAGCTTTATGT--
---GTTTTATTGCC
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTAGCTTTATGT--
--TGATTTATGGCC
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTAGCTTTATGT-
---NTTTTATGAC
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C