Information for 24-GTCTGGCCAACA (Motif 26)

A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGCCAACA
CTGTCTGG------
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTCTGGCCAACA-
-TYTGACCASWRG
A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A A C G T
A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTCTGGCCAACA
VBSYGTCTGG------
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGCCAACA
TGTCTAGA-----
A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGGCCAACA
NNTNNTGTCTGGNNTNG-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGCCAACA
GGTCTGGCAT---
A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGCCAACA
TGTCTAGACA---
A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGCCAACA
CGTCTAGACA---
A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCTGGCCAACA
--CGTGCCAAG-
A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGCCAACA
WDNCTGGGCA---
A C G T A C T G A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T