Information for 19-GTCAAAGGAATC (Motif 18)

A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0083.1_Tcf7_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAAGGAATC
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAAGGAATC
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAAGGAATC
AAACAGACAAAGGAAT-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAAGGAATC
ANATCAAAGNN---
A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAAAGGAATC
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAAAGGAATC
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTCAAAGGAATC
AAAGATCAAAGGAA--
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTCAAAGGAATC
ACATCAAAGG----
A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAAGGAATC
ASATCAAAGG----
A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTCAAAGGAATC
ACWTCAAAGG----
A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A C G T A A C G T A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T