| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 143.0 +/- 0.0bp |
| Average Position of motif in Background | 66.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0172.1_Sox1_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CTTGTTAGCG CTATAATTGTTAGCG |
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PH0040.1_Hmbox1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CTTGTTAGCG-- GAAAACTAGTTAACATC |
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|
PH0032.1_Evx2/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTTGTTAGCG--- ANCGCTAATTAGCGGTN |
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|
HMBOX1/MA0895.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTTGTTAGCG ACTAGTTAAC- |
|
|
|
PH0098.1_Lhx8/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTTGTTAGCG--- ACCCCTAATTAGCGGTG |
|
|
|
PH0168.1_Hnf1b/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTTGTTAGCG--- ANNNCTAGTTAACNGNN |
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|
|
MF0011.1_HMG_class/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTTGTTAGCG ATTGTT---- |
|
|
|
PH0097.1_Lhx6_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTTGTTAGCG--- TCCACTAATTAGCGGTT |
|
|
|
SRY/MA0084.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTGTTAGCG ATTGTTTAN- |
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|
|
Sox5/MA0087.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTTGTTAGCG ATTGTTA--- |
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