Information for 5-GCAGCTTCCC (Motif 24)

A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.963e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background74.0 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTTCCC-
DGCAGCTGCYSS
A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCAGCTTCCC
---GCTTCC-
A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTTCCC
CGCAGCTGCG-
A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTTCCC
GGCAGCTGCC-
A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C A C G T

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTTCCC
CAGCAGCTGCTG
A C G T A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTTCCC
AGCAGCTGCT-
A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCAGCTTCCC---
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCTTCCC
NNAGCAGCTGCT-
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTTCCC
CGCAGCTGCG-
A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C
A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCAGCTTCCC---
---NNTTCCCANN
A C T G A G T C C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G