Information for 3-CCCTATGGGC (Motif 16)

A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G T A A C G T C G T A A C T G A C T G A C T G
p-value:1e-3
log p-value:-9.045e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background99.2 +/- 91.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCCTATGGGC-
TGCCCTNAGGGCA
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCTATGGGC-
TGCCCTGAGGGCA
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCCTATGGGC-
TGCCCNNAGGGCA
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CCCTATGGGC-
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCTATGGGC--
TCACCTCTGGGCAG
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCCTATGGGC--
GCCTCAGGGCAT
A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTATGGGC--
SCCTSAGGSCAW
A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCCTATGGGC--
---TNNGGGCAG
A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCTATGGGC
GCCATATGGT-
A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCTATGGGC
CACCATATGGCG
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C T G A C T G A G T C
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G