| p-value: | 1e-3 |
| log p-value: | -7.630e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 22.0 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 94.0 +/- 0.0bp |
| Average Position of motif in Background | 103.2 +/- 59.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATATACATTAT GAATATTCAT--- |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AATATACATTAT ATGAATATTCATGAG |
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|
Foxq1/MA0040.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AATATACATTAT AATAAACAATN- |
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|
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATATACATTAT GHATATKCAT--- |
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|
|
POU3F3/MA0788.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATATACATTAT AAATTAGCATAAT |
|
|
|
POU3F1/MA0786.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATATACATTAT TAATTTGCATAA- |
|
|
|
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATATACATTAT---- -WYATGCATWATGCAT |
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|
|
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AATATACATTAT--- AAAATATGCATAATAAA |
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|
|
FOXH1/MA0479.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AATATACATTAT TCCAATCCACA---- |
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|
|
ZBTB32/MA1580.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AATATACATTAT --TGTACAGTAT |
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