Information for 17-AGAACTTGAC (Motif 28)

C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.504e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets105.0 +/- 0.0bp
Average Position of motif in Background122.3 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAACTTGAC
TGACCTTGAN
C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGAACTTGAC
NATGACCTTGA-
A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAACTTGAC--
TGACCTTGACCT
C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAACTTGAC
TGACCTTGAV
C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

NR6A1/MA1541.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGAACTTGAC------
NTGACCTTGAACTTGAN
A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGAACTTGAC
-CCACTTGAA
C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGAACTTGAC--
TTTTAAGTACTTAAATT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAACTTGAC
ACCACTTGAA
C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

ESRRA/MA0592.3/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGAACTTGAC-
NNTGACCTTGANN
A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGAACTTGAC--
TGACCTTGACCT
C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T