Information for 1-AATAGCGCCT (Motif 1)

C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C T G A G T C A C G T C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F2/MA0864.2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATAGCGCCT----
NNAATGGCGCCAAAAC
A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T C A G C G T A G C T A C G T A C A G T A T C G A T C G G A T C A C T G A T G C A T G C G C T A G C T A G C T A G C T A A G T C

E2F4/MA0470.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AATAGCGCCT---
NAATGGCGCCAAAA
A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATAGCGCCT--
TTTGGCGCCAAA
C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATAGCGCCT
CCAAAAATAG-----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATAGCGCCT----
NNNNTTGGCGCCGANNN
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATAGCGCCT
DCYAAAAATAGM----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AATAGCGCCT----
NNNNTTGGCGCCGANNN
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AATAGCGCCT
KCCAAAAATAGC----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATAGCGCCT
GCTAAAAATAGC----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AATAGCGCCT
-AGCGCGCC-
C G T A C G T A A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T