Information for 1-ATCAGGATTAAG (Motif 1)

C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dmbx1/MA0883.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ATCAGGATTAAG---
TGAACCGGATTAATGAA
A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ATCAGGATTAAG---
TGAACCGGATTAATGAA
A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ATCAGGATTAAG
--VRGGATTARN
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATCAGGATTAAG
TTGCCCGGATTAGG
A C G T A C G T C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ATCAGGATTAAG
---GGGATTANN
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATCAGGATTAAG
---RGGATTAR-
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

PITX1/MA0682.2/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATCAGGATTAAG
---NGGATTAN-
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATCAGGATTAAG
---CGGATTAN-
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATCAGGATTAAG
--NGGGATTA--
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:ATCAGGATTAAG
----GGATTAGC
C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C