| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 132.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC --NTTTTATGAC |
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HOXA10/MA0899.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC- --NTTTTATTACN |
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HOXD9/MA0913.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC --NTTTTATTGC |
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CDX4/MA1473.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.74 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC- --GTTTTATTGCC |
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PH0046.1_Hoxa10/Jaspar
| Match Rank: | 5 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGCTTTTATTAC--- TNAATTTTATTACCTN |
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PH0013.1_Cdx2/Jaspar
| Match Rank: | 6 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC---- NAATTTTATTACCNNN |
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MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC--- GACTTTTAWTTTGAA |
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PH0012.1_Cdx1/Jaspar
| Match Rank: | 8 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC---- NAATTTTATTACCTNN |
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Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC-- --NTTTCATTRCHD |
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CDX2/MA0465.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGCTTTTATTAC-- --NTTTTATTGCNN |
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