Information for 10-GCATAGCCAA (Motif 26)

A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.727e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background92.9 +/- 84.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCATAGCCAA-
--CGTGCCAAG
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCATAGCCAA---
-ACTAGCCAATCA
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCATAGCCAA----
----AGCCAATCGG
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCATAGCCAA--
--GGTGCCAAGT
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCATAGCCAA---
CCGCATAGCAACGGA
A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCATAGCCAA
GGAACAGCCG-
A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCATAGCCAA
--BCAGACWA
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NFYB/MA0502.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCATAGCCAA----
--NTGGCCAATGAG
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCATAGCCAA---
TACCATAGCAACGGT
A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

NFIC/MA0161.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCATAGCCAA---
--NNTGCCAAGNN
A C T G A G T C C G T A A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A