Information for 17-AATGAGACTTAC (Motif 18)

C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATGAGACTTAC
ATAATGAGGT----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AATGAGACTTAC---
----NNACTTACCTN
C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGAGACTTAC
AAACATAATGAGGTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATGAGACTTAC
-ATGAGTCAT--
C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AATGAGACTTAC
CAAAATCGAAACTAA-
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AATGAGACTTAC
GGAAANTGAAACTNA-
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AATGAGACTTAC
GACGATAATGAGCTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AATGAGACTTAC--
ATAAATGACACCTATCA
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

JUNB/MA0490.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGACTTAC
NNATGAGTCATNN
A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
C G T A C G T A T C G A G A C T C A T G G C T A T A C G G C A T G T A C C T G A A G C T G A C T G C A T

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AATGAGACTTAC
NTAATGAGCT----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T