| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 135.0 +/- 0.0bp |
| Average Position of motif in Background | 99.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GAATCTTTTATA--- ---CCTTTTATAGNC |
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POL012.1_TATA-Box/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GAATCTTTTATA- NNNNNNCTTTTATAN |
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TBP/MA0108.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GAATCTTTTATA- NNNNNNCTTTTATAN |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | GAATCTTTTATA--- -----TTTTATTRGN |
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|
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GAATCTTTTATA--- -----TTTTATKRGG |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GAATCTTTTATA--- -----TTTTATGGCM |
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|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GAATCTTTTATA-- ----NTTTTATDRG |
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|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GAATCTTTTATA--- ---DGWTTTATGRCN |
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|
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAATCTTTTATA----- -NNANTTTTATTGGNNN |
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HSF2/MA0770.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GAATCTTTTATA- GAANGTTCTAGAA |
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