Information for 2-GCTTAGTTCC (Motif 11)

A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-9.833e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background107.6 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTTAGTTCC
YCTTTGTTCC
A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTTAGTTCC-----
--TTACTTCCTNGTN
A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCTTAGTTCC---
TACCCTAGTTACCGA
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAGTTCC
NNCTTTGTTNN
A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTTAGTTCC------
--NNACTTCCTCTTNN
A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAGTTCC
NCCTTTGTTC-
A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTTAGTTCC---
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTTAGTTCC-
-ACTAGTTAAC
A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0011.1_Ehf_1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTTAGTTCC-------
--TNACTTCCGGNTNNN
A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C T G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G T C A G C G A T G T A C T G A C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTTAGTTCC
CCWTTGTYYB
A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A G T C A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G