| p-value: | 1e-3 |
| log p-value: | -7.876e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 12.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 34.0 +/- 0.0bp |
| Average Position of motif in Background | 102.4 +/- 69.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 1 |
| Score: | 0.78 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTTCTCATAAAA--- AAAGCTCGTAAAATTT |
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HOXC13/MA0907.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA- --GCTCGTAAAAA |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.75 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA --NCYAATAAAA |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 4 |
| Score: | 0.75 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTTCTCATAAAA --CCYMATAAAA |
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PH0048.1_Hoxa13/Jaspar
| Match Rank: | 5 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTTCTCATAAAA--- AAACCTCGTAAAATTT |
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|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.73 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA- ---CYHATAAAAN |
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HOXC10/MA0905.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.72 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA- ---GTCGTAAAAT |
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|
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA---- CTACCAATAAAATTCT |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 9 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA- ---GTCATAAAAN |
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HOXB9/MA1503.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CTTCTCATAAAA- ---GTCGTAAAAT |
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