Information for 3-AATTCCCATAAT (Motif 4)

C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background118.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AATTCCCATAAT
AAATTAGCATAAT
A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AATTCCCATAAT---
ATTTCCCAGVAKSCY
C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATTCCCATAAT
AATTTGCATANT
C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Stat5b/MA1625.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AATTCCCATAAT--
CATTTCCCAGAAATC
A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATTCCCATAAT
TAATTTGCATAA-
A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATTCCCATAAT
TAATTTGCATAA-
A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATTCCCATAAT
CTAATTTGCATATT
A C G T A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AATTCCCATAAT----
TCCATCCCATAATACTC
A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AATTCCCATAAT
NNTTCCCANN--
C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AATTCCCATAAT------
--TACCCACAATGCATTG
C G T A C G T A A C G T A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G