Information for 11-TTGAAGTTGACT (Motif 11)

A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A G T C C G T A C G T A
p-value:1e-4
log p-value:-9.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background54.4 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TTGAAGTTGACT---
------TTGACTTTT
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

NR6A1/MA1541.1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTGAAGTTGACT
NTGACCTTGAACTTGAN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAGTTGACT
NNTTGAGGTTNN--
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAGTTGACT-
AAATTCAAGTGGNTTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAGTTGACT
CCTTTGAWGT-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAGTTGACT
NATGACCTTGA--
A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAGTTGACT----
NTTTTAGTTAACNNAGN
A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAGTTGACT
CCTTTGATGT-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGAAGTTGACT
CTTTGATGTGSB--
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGAAGTTGACT
NTCAAGTGG---
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T