Information for 12-CTTTTGCATTCA (Motif 12)

A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background169.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTTTTGCATTCA
NATTTGCATNN-
A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTTTTGCATTCA
TTCATTTGCATAT-
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTGCATTCA
NNATTTGCATATN
A C G T A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTGCATTCA
CTCATTTGCATW--
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGCATTCA-
TNTAATTTGCATACNA
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTGCATTCA
BTVATTWGCATA--
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGCATTCA-
TNTAATTTGCATANNN
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTTTGCATTCA
-ATTTGCATAA-
A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTTTGCATTCA
ATTTTCCATT--
A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTTTGCATTCA
GATTTGCATA--
A G T C A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T