Information for 16-GCTGTATGCAGG (Motif 16)

A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTGTATGCAGG--
----TATGCGGGTA
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTGTATGCAGG-------
NNTNGNNGTAACCAAGNNNNAGN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTGTATGCAGG---
NNNGTAACTANGNNA
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTGTATGCAGG-----
-NNNNATGCGGGTNNNN
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTGTATGCAGG-
CCATTGTATGCAAAT
A C G T A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTGTATGCAGG---
----CATGCGGGTAC
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTGTATGCAGG
GCTGTG------
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

CENPB/MA0637.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTATGCAGG
TTCGTNNNANGCGGG
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTGTATGCAGG
TCCTGTTTACA--
A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCTGTATGCAGG----
-----NNGCAGGTGNN
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G