Information for 3-TGTAGCTATAGG (Motif 3)

A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX1/MA0509.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTAGCTATAGG-
CTGTTGCTATGGCA
A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

ZBED1/MA0749.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTATAGG
TATGTCGCGATAG-
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTATAGG
AATGTATCAATT--
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T A C G T A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTATAGG
AATGTAACAATT--
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T A C G T A C G T

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTAGCTATAGG-
CGGTTGCTATGGCA
A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTAGCTATAGG
AATGTATCAAT---
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTAGCTATAGG
TGTATATATATACC
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGTAGCTATAGG-----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTATAGG-
NNCGTTGCTATGGNN
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGCTATAGG
CTGTTGCTAGGS-
A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C T G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T