Information for 6-TGATCGCCAC (Motif 12)

A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A C T G C G T A A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.268e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGATCGCCAC--
CAAATCCCCACTT
A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T
G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGATCGCCAC-
BTGABTGACAGS
A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGATCGCCAC
GTTAATGGCC--
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCGCCAC--
TNNNATGATTTCNNCNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGATCGCCAC-
NTGATTGACAGN
A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGATCGCCAC
TTGATTGN---
A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGATCGCCAC--
NTTATTCGTCATNC
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TGATCGCCAC-
ACCGGTTGATCACCTGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGATCGCCAC
TTTNATTGCY--
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGATCGCCAC
----ATCCAC
A C G T A C T G C G T A A C G T A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C