Information for 4-GCCACATGGC (Motif 25)

A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.419e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background98.4 +/- 66.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCCACATGGC
GACACATGGC
A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

MYCN/MA0104.4/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCCACATGGC-
GGCCACGTGGCC
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

USF1/MA0093.3/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCCACATGGC--
NNGTCACATGACNN
A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

USF2/MA0526.3/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCCACATGGC--
NNGTCACATGACNN
A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

MSGN1/MA1524.1/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCCACATGGC-
NNACATATGGCN
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T
A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCACATGGC
GTCACATGAY
A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCACATGGC
GTCACGTGGM
A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCACATGGC
NNCCACGTGG-
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCCACATGGC
GCCATATGGT
A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCACATGGC
NNCCACGTGG-
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C G T A C T G A C T G A G T C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T