Homer de novo Motif Results (motif_results/SRR3749211_amplicon39_ecDNA_1//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1
Total background sequences = 93000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PAX5/MA0014.3/Jaspar(0.730)
More Information | Similar Motifs Found
motif file (matrix)
2 * A C G T A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C T G A C G T 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PB0050.1_Osr1_1/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)
3 * C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)SD0002.1_at_AC_acceptor/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)
4 * A G T C A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C T G A G T C 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PH0112.1_Nkx2-3/Jaspar(0.608)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T C G T A A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)GSC/MA0648.1/Jaspar(0.761)
More Information | Similar Motifs Found
motif file (matrix)
6 * C G T A A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A A G T C 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PB0028.1_Hbp1_1/Jaspar(0.667)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A C T G A C T G C G T A C G T A C G T A A G T C C G T A A C T G A C G T A C T G A C G T 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PRDM4/MA1647.1/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PB0016.1_Foxj1_1/Jaspar(0.734)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)SD0001.1_at_AC_acceptor/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)Mecom/MA0029.1/Jaspar(0.697)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A C G T A A C G T C G T A C G T A C G T A A G T C C G T A A C T G A C G T A C T G A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)Foxq1/MA0040.1/Jaspar(0.781)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer(0.723)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.701)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C C G T A A C T G A C G T A C T G A C T G A C G T A C T G A G T C C G T A 1e-3-8.553e+00100.00%0.02%0.0bp (68.1bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.652)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C G T A G T C 1e-3-8.265e+00100.00%0.03%0.0bp (77.1bp)MSGN1/MA1524.1/Jaspar(0.791)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C A C G T A C G T A C T G A C G T A G T C A C G T A C G T C G T A A C T G 1e-3-8.076e+00100.00%0.03%0.0bp (69.7bp)GATA4/MA0482.2/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T 1e-3-7.832e+00100.00%0.04%0.0bp (67.4bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.717)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C T G A C T G 1e-3-7.209e+00100.00%0.07%0.0bp (69.4bp)PH0037.1_Hdx/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T 1e-3-7.209e+00100.00%0.07%0.0bp (67.5bp)NKX6-3/MA1530.1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T C G T A 1e-2-6.413e+00100.00%0.16%0.0bp (73.2bp)Stat2/MA1623.1/Jaspar(0.704)
More Information | Similar Motifs Found
motif file (matrix)