Information for 13-GCTTGGAGAGCC (Motif 13)

A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background138.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTTGGAGAGCC
--BTBRAGTGSN
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTTGGAGAGCC
GGTTAGAGACCT
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTTGGAGAGCC-
---TTGAGTGSTT
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTTGGAGAGCC
--CTYRAGTGSY
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTTGGAGAGCC---
CTACTTGGATACGGAAT
A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTTGGAGAGCC-
--CTTGAGTGGCT
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTTGGAGAGCC
CCTTTTATAGNC
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0158.1_Rfx3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCTTGGAGAGCC-----
ACTGACCCTTGGTTACCACAAAG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCTTGGAGAGCC-
---GGAACAGCCG
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCTTGGAGAGCC
-------CAGCC
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C