Information for 15-GCACTTAATT (Motif 27)

A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.391e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif29.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background120.0 +/- 55.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCACTTAATT
GCACTTAA--
A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCACTTAATT
ACCACTTAA--
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GCACTTAATT
ATAACCACTTAAA-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GCACTTAATT
AAGCACTTAA--
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCACTTAATT
AASCACTCAA--
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCACTTAATT
ACCACTTGAA-
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCACTTAATT--
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCACTTAATT
MRSCACTYAA--
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCACTTAATT---
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCACTTAATT---
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T