| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 181.0 +/- 0.0bp |
| Average Position of motif in Background | 61.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CATCCATCCTTA GYCATCMATCAT-- |
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HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CATCCATCCTTA YCATCMATCA--- |
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|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CATCCATCCTTA GTCATCAATCATT- |
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|
PBX1/MA0070.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CATCCATCCTTA CCATCAATCAAA- |
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|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CATCCATCCTTA---- TCACCCATCAATAAACA |
|
|
|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CATCCATCCTTA- GAAGATCAATCACTTA |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CATCCATCCTTA TCATCAATCA--- |
|
|
|
YY1/MA0095.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CATCCATCCTTA GCNGCCATCTTG- |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CATCCATCCTTA RGCCATYAATCA--- |
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|
|
PB0188.1_Tcf7l2_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CATCCATCCTTA- GAAGATCAATCACTAA |
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