Information for 20-GAAGTTCAAGAA (Motif 23)

A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A G T C
p-value:1e-3
log p-value:-9.112e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background111.2 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR6A1/MA1541.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAAGTTCAAGAA---
GTCAAGTTCAAGGTCAA
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTTCAAGAA
CAAAGKTCAA---
A C G T A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAAGTTCAAGAA
AAAGTTCAT---
A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTTCAAGAA
GAANGTTCTAGAA
A C G T A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

ZBTB12/MA1649.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAAGTTCAAGAA
-NNGTTCCAGNN
A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
A C G T T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTTCAAGAA
GAACGTTCTAGAA
A C G T A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAAGTTCAAGAA--
--AGGTCAAGGTCA
A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAGTTCAAGAA---
CTAAGGTTCTAGATCAC
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

VDR/MA0693.2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGTTCAAGAA
TGAGTTCA----
A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTTCAAGAA--
BCNGGTTCTAGANCN
A C G T A C T G C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T