Information for 13-GCCCAGCTTG (Motif 15)

A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G A G T C
p-value:1e-2
log p-value:-6.698e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif115.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background94.5 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGCTTG
TGCCCAGNHW-
A C G T A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCTTG---
CCACACAGCAGGAGA
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCTTG---
GAGCACAGCAGGACA
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCTTG
DCTCAGCAGG
A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCTTG---
CCACACAGCAGGAGA
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCCCAGCTTG
--CAAGCTT-
A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCTTG-----
DCHCAGCAGGRGGCC
A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF449/MA1656.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCCAGCTTG
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCCAGCTTG-
-CGCAGCTGCG
A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T
A C G T A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCCAGCTTG--
--CCAGCTGTTN
A C T G A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A