Information for 21-GGTTCATCTCTC (Motif 23)

A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTTCATCTCTC
TGAGTTCA------
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTTCATCTCTC
GKVTCADRTTWC
A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCATCTCTC---
ATAGTTAATCCCCCNNA
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

DPRX/MA1480.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCATCTCTC
NGGATTATCT---
A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCATCTCTC
AAAGTTCAT-----
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCATCTCTC---
NTTGTTAATCCCTCTNN
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGTTCATCTCTC-
---YCATCMATCA
A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTTCATCTCTC
-TTTCATTRCC-
A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C
A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCATCTCTC---
ATAGTTAATCCCCCTCA
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCATCTCTC---
NTAGTTAATCCCCTTAN
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A