Information for 24-GAGCTTTGTG (Motif 36)

A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C G T A G T C
p-value:1e-2
log p-value:-6.547e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif40.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background94.4 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GAGCTTTGTG--
-NNCTTTGTTNN
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAGCTTTGTG--
--CCWTTGTYYB
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAGCTTTGTG
AGGVNCCTTTGT-
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAGCTTTGTG--
--YCTTTGTTCC
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGCTTTGTG--
--CCTTTGTTTT
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAGCTTTGTG-
-NCCTTTGTTC
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T
A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGCTTTGTG
--CCWTTGTY
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGCTTTGTG---
-BCCWTTGTBYKV
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

SOX18/MA1563.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAGCTTTGTG
--GCATTGTN
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTTTGTG
CTGACCTTTG--
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T