Information for 12-TGACCAACTC (Motif 33)

A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.887e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background106.9 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAACTC-
BTGACCTAVTTW
A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAACTC---
TTGACCTANTTATN
A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

NR1D1/MA1531.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAACTC----
NTGACCTACTGACCC
A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCAACTC
TGACCTARTT
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCAACTC
TGACCTARTT
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCAACTC
TGACCT----
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGACCAACTC-----
CGACCAACTGCCGTG
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGACCAACTC------
CGACCAACTGCCATGC
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

RORC/MA1151.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCAACTC--
TGACCTANTTAN
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGACCAACTC----
NNAGTCCCACTCNNNN
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A