Information for 10-GGTCAAGTCT (Motif 22)

A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C G T A C G T A C T G C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.238e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background72.7 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAAGTCT
AGAGCGGGGTCAAGTA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTCAAGTCT
AGGTCA-----
A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCAAGTCT
CGAGGTCAC----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------GGTCAAGTCT
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAAGTCT
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGTCT
GAGGTCAT----
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCAAGTCT
AGRGGTCA-----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAAGTCT
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTCAAGTCT-
AGGTCAAGGTCA
A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGTCAAGTCT
CAAAGKTCAA----
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C G T
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T A C G T