Information for 2-CTCTGCTAGAGG (Motif 2)

A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C G T C G T A A C T G A G T C C G T A A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background131.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGCTAGAGG--
DCHCAGCAGGRGGCC
A C G T A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCTGCTAGAGG-
-GRTGMTRGAGCC
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCTGCTAGAGG
CHCAGCRGGRGG
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTCTGCTAGAGG---
---TGTCAGGGGGCG
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZBTB26/MA1579.1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGCTAGAGG-
NNNNTTTCTGGAGNN
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTCTGCTAGAGG----
--GGGCCTGAGGCGGG
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCTGCTAGAGG---
CTCCCTGGGAGGCCN
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTCTGCTAGAGG
----TCTAGACA
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

TFAP2A/MA0003.4/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTCTGCTAGAGG----
--NNGCCTGAGGCANN
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCTGCTAGAGG
CACAGCAGGGGG
A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C T G C G T A A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G