Information for 13-GCATTCACATGT (Motif 13)

A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCATTCACATGT-
---GACACATGGC
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GCATTCACATGT---
-----CACGTGTGCH
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCATTCACATGT-----
NNTTTTACATGTANNNT
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCATTCACATGT--
-CATCCAGATGTTC
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCATTCACATGT------
-AATATACATGTAAAATT
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

USF2/MA0526.3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCATTCACATGT---
-NNGTCACATGACNN
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCATTCACATGT-----
ANTNTTACATGTATNTA
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCATTCACATGT-
---GTCACGTGGM
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

USF1/MA0093.3/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATTCACATGT---
-NNGTCACATGACNN
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCATTCACATGT-
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T