Information for 1-CCCCCCAAGGGA (Motif 1)

A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C T G A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets14.0 +/- 0.0bp
Average Position of motif in Background144.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ebf2/MA1604.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CCCCCCAAGGGA--
-TTCCCAAGGGACT
A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

EBF3/MA1637.1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CCCCCCAAGGGA--
-TTCCCAAGGGAAT
A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

EBF1/MA0154.4/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCAAGGGA--
AGTCCCCAGGGGACT
A C G T A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCCCCCAAGGGA
GTCCCCAGGGGA
A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCCCCCAAGGGA---
DBTCCCHWGGGAVTN
A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
C G T A A C G T A G C T A G T C G A T C G A T C G A C T C G T A C T A G C T A G T C A G T C G A T G A C G A C T C G A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCCCCCAAGGGA--
--TCCCNNGGGACN
A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCAAGGGA-
CCCCCCCGGGGGNN
A C G T A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCCAAGGGA-
NGGCCTCCCAGGGAG
A C G T A C G T A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

PB0100.1_Zfp740_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCCAAGGGA
CCCCCCCCCCCACTTG-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCAAGGGA--
ACCCCCCCGGGGGGN
A C G T A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G