Information for 12-ATGTCATTCAGG (Motif 12)

C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A C G T A A C G T A C T G C G T A A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets181.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATGTCATTCAGG
SCTGTCAVTCAV-
A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCATTCAGG
NNGCTGTCACTCANN
A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATGTCATTCAGG
NCTGTCAATCAN-
A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATGTCATTCAGG-
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATGTCATTCAGG
TNGAATTTCATTNAN-
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATGTCATTCAGG
GSCTGTCACTCA--
A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATGTCATTCAGG-----
---ACATTCATGACACG
C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

NR1H4/MA1110.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCATTCAGG
NAGGTCATTGA--
A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGTCATTCAGG
NTGTCAN-----
C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATGTCATTCAGG
TTATGATGTCATA----
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A A C G T A C G T A C G T A C G T