Information for 20-GAGCTTCTTAAC (Motif 25)

A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.179e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background64.3 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTTCTTAAC----
ANNNCTAGTTAACNGNN
A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGCTTCTTAAC
--GCTTCC----
A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGCTTCTTAAC
-AGCTCATTAT-
A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGCTTCTTAAC---
CTTAACCACTTAAGGAT
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTTCTTAAC---
NNNACCTCATTATCNTN
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGCTTCTTAAC---
TAAGCCACTTAACATT
A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

OSR2/MA1646.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCTTCTTAAC
NNGCTTCTGTNN
A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCTTCTTAAC--
CTGAGCTAATTACCGT
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCTTCTTAAC
TGGAGGTAATTAAC
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGCTTCTTAAC---
TAAGCCACTTGAAATT
A C G T A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T