Information for 6-GAGTTACAGT (Motif 15)

A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C G T C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.448e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background92.5 +/- 69.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GAGTTACAGT--
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GAGTTACAGT---
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTACAGT
NTGATTGACAGN
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTACAGT-
TGAGTGACAGSC
A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

DMRTA2/MA1478.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGTTACAGT
AATTGTTACATT
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTACAGT
BTGABTGACAGS
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

ZBTB32/MA1580.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGTTACAGT--
--TGTACAGTAT
A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

IRF6/MA1509.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGTTACAGT
-AGTTTCGGT
A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T
A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

ZBTB12/MA1649.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGTTACAGT-
NNGTTCCAGNN
A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTACAGT---
TNGAATTTCATTNAN
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A