Information for 2-CAGCTTCTTTAT (Motif 5)

A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGCTTCTTTAT
NNGCTTCTGTNN
A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGCTTCTTTAT
----TTGTTTAC
A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGCTTCTTTAT
--GCTTCC----
A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCTTTAT
AGCAGCTGCT----
A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCTTTAT
AGCAGCTGCTNN--
A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGCTTCTTTAT
CAGCAGCTGCTG---
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGCTTCTTTAT---
---CBTGTTTAYAWW
A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGCTTCTTTAT----
----NTGTTTAYATWW
A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCTTCTTTAT
NCAGCTGCTG---
A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGCTTCTTTAT
----TTGTTTAC
A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C