Information for 12-GCTGGGAGCTGT (Motif 12)

A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.076e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif29.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background99.6 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP11/MA1573.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGAGCTGT------
TGCTGGGAAATGTAGTCCN
A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A C T G G A T C A G C T C T A G A C T G C T A G T C G A T C G A C G T A A G C T C T A G C A G T C T G A T C A G A C G T G A T C A G T C A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGGAGCTGT----
GCMTBCTGGGAGTTGTAGTY
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCTGGGAGCTGT
---CGGAGC---
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGGAGCTGT----
GCATTCTGGGAATTGTAGTT
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTGGGAGCTGT-
---GACAGCTGTT
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G T C C G T A A C T G G T A C C G A T A C T G A G C T A G C T

TGIF1/MA0796.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTGGGAGCTGT--
--TGACAGCTGTCA
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCTGGGAGCTGT-
-----CAGCTGTT
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTGGGAGCTGT-
--NNGCAGCTGTT
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGGGAGCTGT
RGSMTBCTGGGAAAT--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTGGGAGCTGT---
---GGGAATTGTAGT
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T