Information for 7-CCCCCGTGAGTC (Motif 8)

A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CCCCCGTGAGTC
AAATTCCCCCCGGAAGT-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCCCGTGAGTC--
CCCCCTTGGGCCCC
A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCGTGAGTC
ACCCCCCCGGGGGGN
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCGTGAGTC
NCCCCCCCGGGGGGN
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCGTGAGTC--
NNNACCGAGAGTNNN
A C G T A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCGTGAGTC
CCCCCCCGGGGGNN
A C G T A C G T A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCCCGTGAGTC-----
---NNATGAGTCATNNN
A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T

FOS::JUND/MA1141.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCCCGTGAGTC----
---GGATGAGTCATCG
A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCCCCGTGAGTC----
-----NTGAGTCATCN
A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

FOS::JUN/MA0099.3/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCCCCGTGAGTC---
-----ATGAGTCATC
A G T C A G T C A G T C A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T C A T G G T C A T A C G C G A T G T A C C G T A A G C T T G A C