Information for 18-TTCATTACTTCT (Motif 20)

A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A
p-value:1e-4
log p-value:-9.623e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets150.0 +/- 0.0bp
Average Position of motif in Background88.9 +/- 82.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCATTACTTCT
TTTCATTRCC---
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTCATTACTTCT
NTTTCATTRCHD--
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T A C G T A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCATTACTTCT
CATTCATTCATTC-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCATTACTTCT
NTTAATTACN---
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCATTACTTCT-
NNNTTAATTGGTTTTN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTCATTACTTCT
NNCTCATTAT----
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCATTACTTCT-
GNATTAATTAGTTNNC
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCATTACTTCT-
NAATTAATTAATTNNN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCATTACTTCT
TTTCATKGCC---
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C A C G T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTCATTACTTCT
GTCATTAA----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A G T C A C G T
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T A C G T A C G T