Information for 6-TCGAAAAAATCC (Motif 9)

A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TCGAAAAAATCC
TACTGGAAAAAAAA-
A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAAAATCC
AGTCGTAAAAA---
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCGAAAAAATCC
GTCGTAAAAA---
A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAAAATCC
GGTCGTAAAAA---
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAAAATCC
GGTCGTAAAATT--
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAAAATCC
GGTCGTAAAAC---
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAAAAATCC
TTAGGTCGTAAAATTTC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXC9/MA0485.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCGAAAAAATCC
GTCGTAAAAT---
A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAAAATCC
GCTCGTAAAAA---
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAAAATCC
GGTCGTAAAAT---
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T