Information for 3-GGACTCGGAGAT (Motif 3)

A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGACTCGGAGAT-
--ACCCGGATGTA
A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0011.1_Ehf_1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGACTCGGAGAT--
AGGACCCGGAAGTAA
A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGACTCGGAGAT
-----CGGAGC-
A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGACTCGGAGAT
NNTGGACTTTGNN--
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A A C G T A C G T

ELF2/MA1483.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGACTCGGAGAT-
-AACCCGGAAGTA
A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T C G T A G C T A G T A C T A G C G T A C A C T G C T A G T C G A G C T A T C A G G A C T T C G A

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGACTCGGAGAT
NNTGGACTTTGNN--
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGACTCGGAGAT
GGGAATTGTAGT-
A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGACTCGGAGAT---
AGATGKDGAGATAAG
A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

ELF5/MA0136.2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGACTCGGAGAT-
--ACCCGGAAGTA
A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGACTCGGAGAT--
-AACAAGGAAGTAA
A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A