| p-value: | 1e-2 |
| log p-value: | -6.905e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 34.9 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 50.0 +/- 0.0bp |
| Average Position of motif in Background | 99.7 +/- 95.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTAGCATC BTVATTWGCATA |
|
|
|
BARHL1/MA0877.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTAGCATC NCGTTTAN---- |
|
|
|
BARHL2/MA0635.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTTTAGCATC ANCGTTTANN--- |
|
|
|
POU5F1/MA1115.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTAGCATC- NATTTGCATNN |
|
|
|
POU5F1B/MA0792.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTTTAGCATC -ATTTGCATA |
|
|
|
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTAGCATC CTCATTTGCATW |
|
|
|
POU3F4/MA0789.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTTTAGCATC -ATTTGCATA |
|
|
|
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GTTTAGCATC- -ATTTGCATAA |
|
|
|
FOXF2/MA0030.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTTTAGCATC- NTTGTTTACGTTNN |
|
|
|
PB0029.1_Hic1_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GTTTAGCATC-- NGTAGGTTGGCATNNN |
|
|
|