Information for 15-CTAGGCAGCCAA (Motif 17)

A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTAGGCAGCCAA
----BCAGACWA
A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTAGGCAGCCAA
TACTTGGCAGA---
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGCAGCCAA--------
NNNNGGCAGCCATTTTGNNNN
A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTAGGCAGCCAA-
----CGTGCCAAG
A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCAGCCAA
WDNCTGGGCA-----
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGGCAGCCAA--------
RGGCAMTAGGGAGCCATRGAAGGTK
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGCAGCCAA
TCTAGACA-----
A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTAGGCAGCCAA----
------AGCCAATCGG
A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

ZNF16/MA1654.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAGGCAGCCAA----------
AATAGGGAGCCATGGAAGGTTTT
A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A A C G T C T G A C T A G C A T G A T C G C T G A C T A G G A T C G A T C T G C A A G C T C A T G T C A G T C G A C T G A C T A G C T A G A G C T A C G T A G C T A G C T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGCAGCCAA
NNTTGGCANN---
A C G T A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T