Information for 15-TAATATACAT (Motif 16)

A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A
p-value:1e-3
log p-value:-7.139e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif74.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background86.7 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TAATATACAT
GAATATTCAT
A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TAATATACAT
GHATATKCAT
A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TAATATACAT---
ATGAATATTCATGAG
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAATATACAT--
TAATTTGCATAA
A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAATATACAT---
CTAATTTGCATATT
A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAATATACAT--
TAATTTGCATAA
A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAATATACAT--
-AATAAACAATN
A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAATATACAT---
NANTTATATATAANGN
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATATACAT----
TNTAATTTGCATANNN
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATATACAT-----
TNNATTATGCATANNTT
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T