Information for 3-CAATGCCAGAAA (Motif 3)

A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CAATGCCAGAAA
--ATGCCAGACN
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAATGCCAGAAA-----
CAAATCCAGACATCACA
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB26/MA1579.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAATGCCAGAAA----
-TACTCCAGAAAAGAT
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

CDX1/MA0878.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAATGCCAGAAA--
---GGCCATAAAAC
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAATGCCAGAAA
-CGTGCCAAG--
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAATGCCAGAAA
CACAATGC------
A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAATGCCAGAAA
CAAGGHCANV--
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAATGCCAGAAA
NTCAAGGTCA----
A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Stat5b/MA1625.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAATGCCAGAAA--
CATTTCCCAGAAATC
A C G T A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAATGCCAGAAA
---TGCCAGCB-
A G T C C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A
A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T