Information for 18-TGTATATTACAG (Motif 18)

A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTATATTACAG
NNNTTTNTAATACNG
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTATATTACAG
ATGCATAATTCA-
A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTATATTACAG
TGTGGATTNNN-
A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTATATTACAG
TATTGTTTATT----
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGTATATTACAG--
-CCACATTCCAGGC
A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T
A C G T G A T C G A T C C T G A T G A C C T G A A G C T C G A T G T A C G A T C C G T A C T A G T A C G T G A C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGTATATTACAG
ATGAATATTC---
A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTATATTACAG
NNTGTGGATTSS--
A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTATATTACAG
--TRCATTCCAG
A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
A C G T A C G T A G C T C T A G T G A C C G T A A C G T C G A T A G T C A G T C C T G A C A T G

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTATATTACAG
TCTTTATATATAAATA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTATATTACAG------
-TCNCTTTACAGCGNNNT
A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T