Information for 10-TGGCTTGGCATC (Motif 11)

A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A G T C A G T C C G T A C G T A A C T G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGGCTTGGCATC
-TACTTGGCAGA
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTTGGCATC--
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGGCTTGGCATC
--NNTTGGCANN
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGCTTGGCATC
--GGTTGGCAT-
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGGCTTGGCATC
---NTTGGCANN
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGCTTGGCATC
---CTTGGCAA-
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGCTTGGCATC
--NGTGGGCAT-
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

ATF6/MA1466.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGGCTTGGCATC
TGATGACGTGGCAG-
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A G C T A C T G T C G A A G C T A C T G C T G A A G T C C T A G A G C T C T A G C A T G G T A C C T G A A T C G A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGCTTGGCATC
TGATGACGTGGCAN-
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGGCTTGGCATC
--GCTCGGSCTC
A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C