Information for 3-GGTCCGAGTCTA (Motif 4)

A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C T G C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTCCGAGTCTA
TWVGGTCCGC-----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGTCCGAGTCTA-
-----TWGTCTGV
A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGTCCGAGTCTA
GCTCCG------
A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGTCCGAGTCTA
CAACGTCCGCGG---
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGTCCGAGTCTA
AGGGGTCAGAGGTCA
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GGTCCGAGTCTA--
------TGTCTAGA
A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGTCCGAGTCTA--
GNNACCGAGAATNNN
A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGTCCGAGTCTA
CANAGNNCAAAGTCCA
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGTCCGAGTCTA---
NTNNNAGGAGTCTCNTN
A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GGTCCGAGTCTA
GAGGTCAAAGGTCA
A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C T G A C G T A G T C A C G T C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A