Information for 1-GTTCACGCTG (Motif 1)

A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C T G A C G T A C T G C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTTCACGCTG
NNGGTCACGCTC
A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTTCACGCTG
---CACGCA-
A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTTCACGCTG---
---CCTGCTGAGH
A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTCACGCTG
NYTTCCCGCC-
A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

TFDP1/MA1122.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTCACGCTG
NNTTCCCGCCN
A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C

MYBL1/MA0776.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTCACGCTG
ACCGTTAACGGT-
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T

VDR/MA0693.2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTTCACGCTG
TGAGTTCA-----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PAX6/MA0069.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTCACGCTG-----
-TTCACGCATGAGTT
A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTCACGCTG-----
NNTCCTGCTGTGNNN
A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTCACGCTG-
-TTCCCGCCWG
A C T G A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G