Information for 7-AGGACATATTAA (Motif 9)

C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGACATATTAA----
-----ATATTAATTAA
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGGACATATTAA-
-------ATTAAA
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGACATATTAA
TRAGGTCA------
A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGACATATTAA
AAGGATATNTN--
A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGACATATTAA
NACAGGAAAT-----
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGACATATTAA--
AAAAACCATTAAGG
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGACATATTAA---
CAAAACCAATTAATTT
A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGACATATTAA---
AATATACATGTAAAACA
A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGACATATTAA
CAAGACGCCTTA-
A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

NR1D2/MA1532.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGACATATTAA---
NTGACCCACTAACCC
C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C