Information for 2-GAGCTACACT (Motif 9)

A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.447e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background99.5 +/- 93.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACACT----
CNNNGCTACTGTANNN
A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACACT----
TNNTGCTACTGTNNNN
A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

DMRTA2/MA1478.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCTACACT
AATTGTTACATT
A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGCTACACT-
-TGCTACTGTT
A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T A C G T
A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTACACT
NTTGATACATT
A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGCTACACT---
---GTACACTCAC
A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGCTACACT
CAGCC-----
A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGCTACACT---
---MRSCACTYAA
A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACACT
CGGAGC------
A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGCTACACT
AATTGATACATT
A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A C G T
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T