Information for 5-TAAGGACC (Motif 22)

A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A G T C A C G T A C G T C G T A
p-value:1e-2
log p-value:-5.962e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif240.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background95.2 +/- 74.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TAAGGACC--
TCAATGACCTA
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGACC-
GGTTAGAGACCT
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGGACC---
NNAATTAATGACCNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

HOXA4/MA1496.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGACC
NTAATGAC-
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGACC
NTAATGAT-
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T

HOXA6/MA1497.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAAGGACC
NNTAATTACN
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
T A C G G A C T G C A T G C T A C G T A A G C T C A G T T C G A T A G C T G A C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAGGACC-
ATAATGAGGT
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

HOXC4/MA1504.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGACC
NTAATGAN-
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T

HOXA9/MA0594.2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGACC
NNTTTACGAC-
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C A C G T

HOXB7/MA1501.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAAGGACC
GNTAATTACC
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A G T C
A T C G A G C T A G C T C G T A G T C A A C G T A C G T T C G A G T A C A G T C