Information for 11-GAGATCTTAATG (Motif 11)

A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A C G T A A C T G C G T A A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAGATCTTAATG--
---ATATTAATTAA
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GAGATCTTAATG--
-----TTTAATGAN
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATCTTAATG
NNNCTGATATCTCNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GAGATCTTAATG-
-----GKTAATGR
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAGATCTTAATG--
------TTAATTAN
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXC4/MA1504.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GAGATCTTAATG--
------NTAATGAN
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GAGATCTTAATG--
------TTAATTAN
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

HOXB4/MA1499.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GAGATCTTAATG--
------NTAATGAT
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

HOXD4/MA1507.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAGATCTTAATG--
------NTAATGAN
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGATCTTAATG-----
-AGTTATTAATGAGGTC
A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C