Information for 3-GGTATCCT (Motif 14)

A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C G T C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.181e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif193.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background100.6 +/- 76.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGTATCCT-
AAGATATCCTT
A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
AATAGGGTATCAATTAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCT----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGTATCCT----
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGTATCCT-----
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G