Information for 6-GGACGTGAGCAT (Motif 6)

A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background116.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGACGTGAGCAT
GGAGGAGGTGAGAA-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGACGTGAGCAT---
GGGCCGTGTGCAAAAA
A C G T A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGACGTGAGCAT
GGACGTGC----
A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTGAGCAT
GGGTACGTGC----
A C G T A C G T A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGACGTGAGCAT
RTACGTGC----
A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACGTGAGCAT
-TACGTGCV---
A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGACGTGAGCAT
GTACGTGCCC--
A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T A C G T

NRL/MA0842.2/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGACGTGAGCAT----
---CGTCAGCANTTTT
A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T C A G A G C T G T A C C T G A A C T G A G T C C T G A G A T C C G A T G C A T G C A T G A C T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGACGTGAGCAT-
GTGCCGTGTGCAAA
A C G T A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GGACGTGAGCAT---
GGAAGAGTCACGTGACCAATAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C