Information for 9-GTCAGGGCAAGC (Motif 11)

A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.121e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCAGGGCAAGC
-TNNGGGCAG--
A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGGGCAAGC
ATGCCCGGGCATGT
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGGCAAGC
WDNCTGGGCA---
A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCAGGGCAAGC--
---AAGGCAAGTGT
A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCAGGGCAAGC
-TRAGGTCA---
A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

ZNF682/MA1599.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCAGGGCAAGC------
--CGGGCCAAGCCCCTAT
A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGCAAGC
AGGTCAAGGTCA--
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGGCAAGC
AGTCACGC-----
A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTCAGGGCAAGC---
AACATGCCCAGACATGCCCN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTCAGGGCAAGC---
AACATGCCCAGACATGCCCN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C