Information for 8-AGAGTGGTTC (Motif 15)

C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A G T C C G T A A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.888e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif35.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background90.4 +/- 74.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGAGTGGTTC
TTRAGTGSYK-
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGAGTGGTTC
NNNTTGAGTGGNNN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTGGTTC
CTTGAGTGGCT-
A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGGTTC
TTGAGTGSTT-
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGGTTC
TTAAGTGCTT-
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGAGTGGTTC
---GTGGAT-
C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAGTGGTTC---
TGCGGAGTGGGACTGG
A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTGGTTC
CTYRAGTGSY--
A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGTGGTTC
BTBRAGTGSN--
A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGTGGTTC--
GGAGAAAGGTGCGA
A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A