Information for 24-CTGACCAACC (Motif 38)

A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-6.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background137.0 +/- 107.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGACCAACC--
CCAAGCCCAACCAG
A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGACCAACC---
-GGACCACCCACG
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGACCAACC
-TGACCT---
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGACCAACC---
-AGACCACCCASR
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGACCAACC----
TTGACCTANTTATN
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGACCAACC-
TYTGACCASWRG
A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

NFYA/MA0060.3/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGACCAACC---
--AACCAATCAGA
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

GLI3/MA1491.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGACCAACC------
-AGACCACCCACGTCG
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGACCAACC
TGCTGACTCA--
A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

GLI2/MA0734.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGACCAACC------
-AGACCACCCACGTCG
A G T C A C G T A C T G C G T A A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G