Information for 8-TGGCCCTATGTG (Motif 9)

A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background188.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGGCCCTATGTG
--ACCATATGTT
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCCTATGTG
NNTGGCCCCAGNN-
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G A C G T

SRF/MA0083.3/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGCCCTATGTG----
TGNCCATATATGGTCA
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGGCCCTATGTG
---CCATATGT-
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGCCCTATGTG
--GCCATATGGT
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCCCTATGTG---
TGWCCTCARNTGACC
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCCCTATGTG---
TGACCTCAGGTGACC
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G A C T T A C G C G T A T G A C A G T C G A C T A T G C C T G A C A T G T A C G G C A T T A C G T C G A T G A C G T A C

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGCCCTATGTG
--GACATATGTT
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGCCCTATGTG
--ANCATATGTT
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

NEUROG1/MA0623.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGCCCTATGTG
--GACATATGTC
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G
A C G T A C G T T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C