Information for 23-ATAAAAGAAGAG (Motif 24)

C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T C G T A A C G T
p-value:1e-3
log p-value:-8.322e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets185.0 +/- 0.0bp
Average Position of motif in Background125.2 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATAAAAGAAGAG
NCYAATAAAA------
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATAAAAGAAGAG-
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATAAAAGAAGAG-
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATAAAAGAAGAG
GTCATAAAAN-----
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATAAAAGAAGAG
CCYMATAAAA------
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATAAAAGAAGAG
KGCCATAAAA------
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ATAAAAGAAGAG
AACCAATAAAATTT---
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T A C G T A C G T A C G T

ZNF384/MA1125.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATAAAAGAAGAG
TTTAAAAAAAAA-
A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATAAAAGAAGAG
NGYCATAAAWCH----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATAAAAGAAGAG
GGTAATAAAAA-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T