Information for 1-CYKKAGKTAYRG (Motif 1)

A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T A G A C G T C G T A G T C A A G T C A C G T G T A C G T C A C T G A A C T G
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.811
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif159.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets159.0 +/- 12.7bp
Average Position of motif in Background99.5 +/- 108.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CYKKAGKTAYRG-
TACCCTAGTTACCGA
A C G T A C G T A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CYKKAGKTAYRG
-ACTAGTTAAC-
A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CYKKAGKTAYRG--
--TGATTTATGGCC
A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CYKKAGKTAYRG----
GGGTGAGTGACAGGCGG
A C G T A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CYKKAGKTAYRG-
-RTGATTKATRGN
A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T
A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

PKNOX1/MA0782.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CYKKAGKTAYRG---
TTTGAGTGACAGCTA
A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

GATA4/MA0482.2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CYKKAGKTAYRG--
--NNAGATAAGGNN
A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T A C G T
A C G T A C G T C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

TFAP2A/MA0003.4/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CYKKAGKTAYRG
NNGCCTGAGGCANN-
A C G T A C G T A C G T A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CYKKAGKTAYRG--
--TGAGTGACAGSC
A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0023.1_Dlx4/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CYKKAGKTAYRG---
GTCGGTAATTATNGNGN
A C G T A C G T A G T C A G C T A C G T A C T G C G T A A C T G A C G T A C G T C G T A G A C T C T G A A C T G A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C