Information for 13-GAGAATATTACA (Motif 15)

A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets184.0 +/- 0.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGAATATTACA---
-CTAATATTGCTAAA
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGAATATTACA---
-CTAATATTGCTAAA
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGAATATTACA
AAGATAAGATAACA
A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GAGAATATTACA
GNNACCGAGAATNNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGAATATTACA-
GCAAAACATTACTA
A C G T A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGAATATTACA---
GAAAAAATTGCAAGG
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GAGAATATTACA
TTGACCGAGAATTCC---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGAATATTACA------
--NANTATTATAATTNNN
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGAATATTACA
AAGGATATNTN-
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GAGAATATTACA---
AADGAGVCANYASTACAGNC
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C