Information for 8-CTAATTTGAGAG (Motif 9)

A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX4/MA0068.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTAATTTGAGAG
CTAATTAG----
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTAATTTGAGAG-
AGCGCTAATTAGCGATT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTAATTTGAGAG
CTATTTTTGG--
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTAATTTGAGAG
NNTAATTAGA---
A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T A C G T

ARGFX/MA1463.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAATTTGAGAG
TCTAATTAAA---
A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A A C G T A C G T A C G T

TLX2/MA1577.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAATTTGAGAG
CTAATTAN----
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G A C G T A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTAATTTGAGAG
NNTAATTAGN---
A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTAATTTGAGAG
GCTATTTTTGGM-
A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T

LHX9/MA0701.2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAATTTGAGAG
NTAATTAG----
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G A C G T A C G T A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTAATTTGAGAG
NNTCTATTTTTAGNN
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A