Information for 13-CTCACAAGTA (Motif 23)

A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T A C T G A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.196e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif34.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background92.4 +/- 74.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCACAAGTA---
NNNTAACAATTATAN
A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCACAAGTA----
ANTNTTACATGTATNTA
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCACAAGTA----
NNTTTTACATGTANNNT
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCACAAGTA----
ANTATTACATGTANNNN
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCACAAGTA
-TCACACCT-
A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCACAAGTA----
NNTATTACATGTANNNT
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCACAAGTA
-TCACACCT-
A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCACAAGTA
-TCACACCT-
A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCACAAGTA
CTTCACACCTA
A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

MXI1/MA1108.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCACAAGTA
GACACATGGC
A G T C A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T C G T A
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C