Information for 3-AAATATTCCCTG (Motif 6)

C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAATATTCCCTG--
GATAATTAATCCCTCTT
A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAATATTCCCTG--
----ATTTCCTGTN
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAATATTCCCTG--
NANANTTAATCCCNNNN
A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAATATTCCCTG--
NNNAATTAATCCCCNCN
A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AAATATTCCCTG--
----ATTTCCTGTN
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAATATTCCCTG--
GANNATTAATCCCTNNN
A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTCCCTG
NNTNNCAATATTAG---
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTCCCTG
NNTNNCAATATTAG---
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAATATTCCCTG-
--GAATTCCCCGG
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T
A C G T A C G T C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAATATTCCCTG
AATTATT-----
C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G T C A G T C A C G T A C T G
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T