Information for 22-CCCCTTCATT (Motif 35)

A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G A C T G
p-value:1e-2
log p-value:-6.680e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background93.0 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCCCTTCATT---
---TTTCATTRCC
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCATT------
NNCATTCATTCATNNN
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTCATT
TTCCCCCTAC---
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

MAZ/MA1522.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCCTTCATT
CGCCCCTCCCC-
A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T
A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCCCTTCATT---
---TTTCATKGCC
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

ZNF24/MA1124.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCCTTCATT-----
--CATTCATTCATTC
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCCTTCATT----
GACCACATTCATACAAT
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCCTTCATT--
--NNCTCATTAT
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

ETV4/MA0764.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCCTTCATT-
-NNCTTCCTGN
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCCTTCATT----
--NTTTCATTRCHD
A G T C A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T