Information for 6-CTTTTAGTAGGA (Motif 6)

A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTTTTAGTAGGA
-TTTTATKRGG-
A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTTTTAGTAGGA-
---ATAGTAGGTG
A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGTAGGA-
GACTTTTAWTTTGAA
A C G T A C G T A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTTTAGTAGGA
-TTTTATTRGN-
A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A
A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTTTAGTAGGA-------
---CTACTAGGATGTNNTN
A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTTTAGTAGGA--
GCACAYAGTAGGKCY
A C G T A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTAGTAGGA-
NNAATTTTATTGGNTN
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTAGTAGGA-
NNANTTTTATTGGNNN
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTTAGTAGGA
NTTTTATDRG--
A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTTAGTAGGA
NTTTTACGAGN-
A G T C A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T