Information for 2-AAGGATATCTTA (Motif 2)

C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:AAGGATATCTTA
AAGGATATNTN-
C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAGGATATCTTA---
NNNCTGATATCTCNNNN
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGGATATCTTA---
AATAGGGTATCATATAT
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGGATATCTTA
CTACTAGGATGTNNTN
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGGATATCTTA---
AATAGGGTATCAATATT
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGGATATCTTA---
GATGGGGTATCATTTTT
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGGATATCTTA---
GATAGGGTATCACTAAT
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGGATATCTTA---
GATAGGGTATCACTAAT
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGGATATCTTA---
ACCCGTATCAAATTT
C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGATATCTTA----
--TNTTATCTTATCTT
C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T