Information for 2-GCTGAATGCAAG (Motif 4)

A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCTGAATGCAAG--
GGACTGAATTCATGCC
A C G T A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCTGAATGCAAG--
ACTATGAATGAATGAT
A C G T A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCTGAATGCAAG---
----AAGGCAAGTGT
A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POU5F1/MA1115.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTGAATGCAAG--
---ATATGCAAATT
A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

ZNF24/MA1124.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAATGCAAG
GAATGAATGAATG
A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGAATGCAAG
NNTNTCATGAATGT---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGAATGCAAG---
---AGATGCAATCCC
A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGAATGCAAG-
-NTGATTGACAGN
A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGAATGCAAG--
--TGAGTGACAGSC
A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGAATGCAAG-
-BTGABTGACAGS
A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C