Information for 12-ATAATAGTTTTA (Motif 13)

C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C G T
p-value:1e-3
log p-value:-8.448e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background103.3 +/- 63.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATAATAGTTTTA
NTAATKGTTT--
C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATAATAGTTTTA
NTAATGGTTTTN
C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A
A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATAATAGTTTTA
CCTTAATNGNTTTT
A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATAATAGTTTTA---
AAAACATCGTTTTTAAG
A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATAATAGTTTTA---
-TAATTGTTCTAAAC
C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATAATAGTTTTA---
TTCAATTGTTCTAAAA
A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAATAGTTTTA-
NNNTTAATTGGTTTTT
A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATAATAGTTTTA-
-TAATTNVATTAN
C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T
A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAATAGTTTTA
CTAATCGNT---
C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATAATAGTTTTA--
AAAATTGTTATGAA
C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A