Information for 10-GGGAATTATCTT (Motif 9)

A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0053.1_Hoxa6/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGGAATTATCTT
NTNAGGTAATTACCTT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

DPRX/MA1480.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGGAATTATCTT
-NGGATTATCT-
A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T
A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTATCTT--
AGGGGGATTAGCTGCC
A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGAATTATCTT--
NNNGGTAATTATNGNGN
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGGAATTATCTT-
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0122.1_Obox2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGAATTATCTT-
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGAATTATCTT
TTGGGGTAATTAACGT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGAATTATCTT-
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

HOXB7/MA1501.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAATTATCTT
GGTAATTAAC--
A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T
T C A G A C T G A G C T G T C A G T C A A C G T G C A T C T G A T C G A T A G C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGAATTATCTT
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T