Information for 1-GTCGGATT (Motif 35)

A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C A C T G C G T A A G T C
p-value:1e-2
log p-value:-5.848e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif98.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background99.4 +/- 129.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GTCGGATT--
--CGGATTAN
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTCGGATT--
--NGGATTAN
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTCGGATT---
-GNGGATTAGN
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PITX2/MA1547.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTCGGATT--
--GGGATTAN
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCGGATT------
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCGGATT------
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTCGGATT---
--GGGATTANN
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTCGGATT---
---GGATTAGC
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCGGATT---
-NNGGATTAGN
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTCGGATT--
--RGGATTAR
A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G