Information for 4-TTGCCCTGTACC (Motif 4)

A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTGTACC---
-TGACCTTTGCCCTA
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTGTACC-
-TGACCTTGACCT
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTGTACC----
-TGACCTTTGCCCTAN
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTGCCCTGTACC---
-TGACCTTTGCCCCA
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTGCCCTGTACC---
-----CTGTTCCTGG
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTGTACC
-TGCCCAGNHW-
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTGTACC----
-TGACCTTTGMCCTNB
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGCCCTGTACC-
-TGACCTTTNCNT
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTGTACC-
-TGACCTTGACCT
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGCCCTGTACC
CTGCCCGCA---
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T