Information for 5-TATGAACC (Motif 11)

A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A G T C C G T A A C G T C G T A
p-value:1e-2
log p-value:-5.672e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif321.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background104.0 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TATGAACC--
--TGAACTCA
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TATGAACC--
-ATGAACTTT
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TATGAACC-
-NTGACCTN
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TATGAACC-
-ATAATCCC
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TATGAACC------
TGTCGTGACCCCTTAAT
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TATGAACC--
TTTGAAACCG
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TATGAACC---
-TTGAMCTTTG
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATGAACC
--TGACCT
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATGAACC
CYHATAAAAN
A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

NR2C1/MA1535.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATGAACC--
-NTGACCTCN
A C G T C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G