Information for 14-TCCTTGTCACTC (Motif 16)

A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX3/MA1114.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTGTCACTC----
NNNCCTGTCACTCANNN
A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCCTTGTCACTC---
NNGCTGTCACTCANN
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTTGTCACTC--
--SCTGTCAVTCAV
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTTGTCACTC--
--NCTGTCAATCAN
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCTTGTCACTC-
-GSCTGTCACTCA
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCTTGTCACTC
--CCTGTCAA--
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCCTTGTCACTC
----AGTCACGC
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGTCACTC-
GAGCCCTTGTCCCTAA
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

NFIC/MA0161.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCTTGTCACTC
TACTTGGCAGA-
A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGTCACTC
NTTATTCGTCATNC
A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C