Information for 20-ATCAGAATATAG (Motif 22)

C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCAGAATATAG--
TATCATAATTAAGGA
A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATCAGAATATAG--
AACACCAAAACAAAGGA
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATCAGAATATAG
--CCAAAAATAG
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATCAGAATATAG
TTTAATTATAATTAAG
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCAGAATATAG---
TTCTAAAAATAGAAA
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATCAGAATATAG
TATAATTATAATATTC
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PHOX2B/MA0681.2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCAGAATATAG
TTTAATCAAATTATAT
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCAGAATATAG-
-KCCAAAAATAGC
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C G T
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATCAGAATATAG
GTAATCDGATTA---
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATCAGAATATAG
AAATTAGCATAAT-
A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T