Information for 9-GTCAGGTGACAT (Motif 9)

A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.0 +/- 0.0bp
Average Position of motif in Background132.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.3/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGTGACAT
TGGTCATGTGACCT
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

USF2/MA0526.3/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGTGACAT
TGGTCATGTGACCT
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
C A G T C T A G T C A G A G C T A T G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G C A T

MITF/MA0620.3/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GTCAGGTGACAT--
NNNNGTCACGTGACNNNN
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A C T G C A T G C A T C G T A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGGTGACAT
BRGTCACGTGAC--
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTCAGGTGACAT
GTCACGTGAC--
A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTCAGGTGACAT
RTCATGTGAC--
A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGGTGACAT
NNATCAGGTGATNN
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTCAGGTGACAT
GTCACGTGAT--
A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTCAGGTGACAT
GTCACGTGAT--
A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GTCAGGTGACAT
---AGGTGTCA-
A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T