Information for 5-TGCGTCTCAC (Motif 28)

A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.525e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background99.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCGTCTCAC
TGGGGCCCAC
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCGTCTCAC--
--KTTCACACCT
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTCTCAC
TTGCGTGCVA-
A C G T A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCGTCTCAC--
----TCACACCT
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCGTCTCAC----
--TGTCTGDCACCT
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCGTCTCAC
TACGTCAT--
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCGTCTCAC----
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCGTCTCAC----
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCGTCTCAC--
CTGTCTGTCACCT
A C G T A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGCGTCTCAC--
----TCACACCT
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T