Information for 6-TTTGGATCATAA (Motif 7)

A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C T G C G T A A C G T A G T C A G T C C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGATCATAA--
ATTTGCATAACAAAG
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTGGATCATAA
--NGGATTAN--
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTGGATCATAA--
ATTTGCATAACAATG
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTGGATCATAA
ATTGCATCAK--
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGATCATAA
NNGATTGCATCATNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTGGATCATAA
ATTGCATCAT--
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T

ATF4/MA0833.2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGATCATAA
NNATTGCATCATNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTGGATCATAA
-TTGCAACATN-
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGATCATAA
NATTTGCATNN---
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGGATCATAA---
TAGTGATCATCATTA
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A