Information for 12-AGAAAAAGGTAC (Motif 12)

C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A G T C A C G T
p-value:1e-4
log p-value:-9.884e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAAAAAGGTAC--
GGAGAAAGGTGCGA
C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAGGTAC
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAAAGGTAC
AAAACAAAGG---
A C G T C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAAAGGTAC
NAGAGAAAGNA--
A C G T C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAAAGGTAC
NAGAAACAGNN--
A C G T C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGAAAAAGGTAC
-RACAAWGG---
C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAAAAAGGTAC-
AGAAACAGAAACT
C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGAAAAAGGTAC
AAATAAGAAAAAAC---
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAAAAAGGTAC-
-GAAACAGGAAGT
C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C A C G T
A C G T T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T

ZNF384/MA1125.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAGGTAC
TTTAAAAAAAAA----
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T C G T A A G T C
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T