Information for 13-GCATCAGGGT (Motif 30)

A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A C T G C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.213e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background99.8 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCATCAGGGT
TACATCCGGGT
A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCATCAGGGT-
ATTGCCTCAGGCCA
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCATCAGGGT-
NNCGCCTCAGGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCATCAGGGT----
GTACATCCGGATTTTT
A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCATCAGGGT
CACAGCAGGGG
A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCATCAGGGT--
GCCTCAGGGCAT
A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCATCAGGGT
ATTGCATCAK---
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCATCAGGGT
ATTGCATCAT---
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCATCAGGGT--
SCCTSAGGSCAW
A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

SIX1/MA1118.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATCAGGGT--
-TATCAGGTTAC
A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C