Information for 1-CACTCGGTAG (Motif 1)

A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A G T C A C T G C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background103.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACTCGGTAG
MRSCACTYAA---
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CACTCGGTAG-
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

OSR1/MA1542.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACTCGGTAG--
--NACAGTAGCN
A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T A C G T
A C G T A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACTCGGTAG----
GCACAYAGTAGGKCY
A C G T A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

ELF2/MA1483.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTCGGTAG--
AACCCGGAAGTA
A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T A C G T
C G T A G C T A G T A C T A G C G T A C A C T G C T A G T C G A G C T A T C A G G A C T T C G A

ELF4/MA0641.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACTCGGTAG--
AACCCGGAAGTG
A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACTCGGTAG
AASCACTCAA---
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CACTCGGTAG-
NNAATTCTCGNTNAN
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CACTCGGTAG-
AGTATTCTCGGTTGC
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTCGGTAG--
-ACCCGGAAGTA
A G T C C G T A A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C T G A C G T A C G T
A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A