Information for 10-CTTAATCTTGTC (Motif 10)

A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background166.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTAATCTTGTC--
TNTTATCTTATCTT
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTAATCTTGTC
-YTAATCCY---
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTAATCTTGTC--
NNNATTAATCCGNTTNA
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTAATCTTGTC--
NNNATTAATCCGNTTNA
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTAATCTTGTC
NYTAATCCYB--
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTAATCTTGTC--
NNTAATCCNGNCNN
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

GATA6/MA1104.2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTAATCTTGTC---
--TTATCTTATCTTT
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G C T A A G C T A T G C G C A T G C A T C G T A G C A T G A T C G C A T G A C T G C A T

NR6A1/MA1541.1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTTAATCTTGTC
NTGACCTTGAACTTGAN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTAATCTTGTC
-TTAATCCG---
A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTTAATCTTGTC-
GNNNATTAATCCCTNCN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A G T C A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A