Information for 10-TTGTTTTTAGCA (Motif 9)

A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets181.0 +/- 0.0bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.4/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTTTTAGCA
NNTCTATTTTTAGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTGTTTTTAGCA
GCTATTTTTAGC-
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTTTTAGCA
NTNTTGTTGTTTGTN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTTTTAGCA-
TTCTATTTTTAGNNN
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTTTAGCA
GCTATTTATAGC-
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGTTTTTAGCA
TAATTGTTCTAAAC-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTTTAGCA
TCTATTTATAGN-
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGTTTTTAGCA
TATTGTTTATT---
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTTTAGCA
NCNTTTGTTATTTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTTTAGCA
KCTATTTTTRGH-
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T