Information for 1-TTTTTAAATATC (Motif 4)

A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTTTTAAATATC
-ATTTGAATT--
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTTTAAATATC
TATGTAAATAT-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTTTAAATATC
TATGTAAATAT-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTTTAAATATC--
TCTTTATATATAAATA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Foxl2/MA1607.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTAAATATC
NNTGTTTACATANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTTAAATATC--
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTTAAATATC--
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

LMX1B/MA0703.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTTTAAATATC
ATTTTAATTAA-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
C T G A C G A T C G A T A G C T A C G T C G T A C G T A A C G T A C G T G T C A G T C A A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTTTAAATATC---
GATTATTAATTAACTTG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTAAATATC
TCTTTANTAATANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A G T C
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T