Information for 3-GTAGCCTTGC (Motif 25)

A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.548e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background117.5 +/- 104.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTAGCCTTGC
BNTGDCCTTG-
A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTAGCCTTGC-
NTGACCTTGAN
A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTAGCCTTGC-
-TGACCTTGAV
A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTAGCCTTGC-
-TGACCTTGAN
A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GTAGCCTTGC
ATGTACAGTAGCAAAG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAGCCTTGC--
GTGACCTTGRVN
A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAGCCTTGC----
GCTGACCTTGAACTN
A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTAGCCTTGC----
TGTTKCCTAGCAACM
A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTAGCCTTGC
GTGACCTT--
A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTAGCCTTGC--
NNNGTAACTANGNNA
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A