Information for 9-GCCAAGCTGGTG (Motif 9)

A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAGCTGGTG
NNTGCCAAGNN----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCTGGTG
CGTGCCAAG------
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCCAAGCTGGTG--
----RGCAGGTGYA
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCAAGCTGGTG
--CCAGCTGTTN
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCAAGCTGGTG--
---NNGCAGGTGNN
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCAAGCTGGTG--
---NNGCAGGTGNN
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCAAGCTGGTG---
--NNGGCAGGTGCNN
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCAAGCTGGTG
--NCAGCTGCTG
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCAAGCTGGTG
--CAAGCTT---
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCCAAGCTGGTG--
----GGCAGGTGCA
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A