Information for 1-GCTGTTATCG (Motif 1)

A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T C G T A C G T A A G T C C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background130.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTTATCG--
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

GATA3/MA0037.3/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCTGTTATCG
--TCTTATCT
A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G
A C G T A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTTATCG--
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTTATCG--
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

ZNF341/MA1655.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTTATCG
NNGGCTGTTCCN-
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C A C G T

GATA5/MA0766.2/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTGTTATCG-
-NCCTTATCTG
A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G A C G T
A C G T A C G T A G T C T A G C G C A T C G A T C G T A A C G T A G T C C G A T T A C G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCTGTTATCG
--YSTTATCT
A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G
A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTGTTATCG
NNTCTTATCT
A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G
A C T G T C G A A C G T A G T C A G C T C G A T C G T A A C G T A G T C C G A T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTGTTATCG--
--YCTTATCWVN
A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTTATCG----
NNNNCTGTTAACNNTNN
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A