Information for 13-GAGAGCCTGCCG (Motif 12)

A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGAGCCTGCCG--
---NNCCTGCTGNG
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGCCTGCCG
CTTGAGTGGCT----
A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGCCTGCCG--
AGAGRRACAGCWGAC
A C G T A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAGAGCCTGCCG---
-----CCTGCTGAGH
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGCCTGCCG
TTGAGTGSTT----
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGAGCCTGCCG-
CAGCACCTGCCCC
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGAGCCTGCCG
SNGCACCTGCHS
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAGAGCCTGCCG
---AGCGCGCC-
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAGAGCCTGCCG----
---GCATTGCCGCAGT
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGAGCCTGCCG
--CAGCC-----
A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T