Information for 5-CGCTTGGCTTCC (Motif 5)

A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CGCTTGGCTTCC
------GCTTCC
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCTTGGCTTCC
-GCTCGGSCTC-
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCTTGGCTTCC
--NTTGGCANN-
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCTTGGCTTCC
TACTTGGCAGA-
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCTTCC
CCGATTGGCT---
A C G T A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCTTCC
NNACTTGCCTT--
A C G T A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CGCTTGGCTTCC----
------ACTTCCKGKT
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A G C T A T G C G T A C A C G T A T C G C A G T G C A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCTTGGCTTCC-
-GTTTCACTTCCG
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C A C G T
A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

ETV4/MA0764.2/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGCTTGGCTTCC---
-----NNCTTCCTGN
A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTTGGCTTCC
NGTCACGCTTGGCTGC-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T