Information for 6-GGCCTTAATT (Motif 27)

A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-9.079e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif968.3
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets153.0 +/- 41.0bp
Average Position of motif in Background98.9 +/- 75.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0175.1_Vax2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGCCTTAATT-------
-GNCTTAATTAGTGNNN
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

PRRX1/MA0716.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GGCCTTAATT--
----NTAATTAN
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G

SHOX/MA0630.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GGCCTTAATT--
----TTAATTGG
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G

UNCX/MA0721.1/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGCCTTAATT--
----NTAATTAN
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G

LMX1A/MA0702.2/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GGCCTTAATT--
----TTAATTAA
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T C G T A G T C A A G C T A C G T T C G A T G C A

PH0011.1_Alx1_2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGCCTTAATT-------
CGCATTAATTAATTGGC
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

ISX/MA0654.1/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGCCTTAATT--
----NTAATTAG
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T G T C A C G T A C A G T C A G T C T G A T C A G

Shox2/MA0720.1/Jaspar

Match Rank:8
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGCCTTAATT--
----NTAATTAG
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T G T C A C G T A C A G T C G A T C T G A T C A G

PH0054.1_Hoxa7_1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGCCTTAATT-------
CGAGTTAATTAATAAGC
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T C A G G T C A C T A G C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A C T C G T A C G T A A C T G G T A C

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGCCTTAATT--
----TTAATTAN
A C T G A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C