Information for 15-CTGTCATCTT (Motif 19)

A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C G T A C T G C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.166e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif72.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background115.2 +/- 66.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGTCATCTT
-TGTCANYT-
A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGTCATCTT
NTGTCAN---
A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCATCTT
CCTGTCAA---
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCATCTT
GCTGTCAA---
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGTCATCTT
YTGWCADY--
A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCATCTT-
GCCGCCATCTTG
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCATCTT-
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCATCTT-
GCNGCCATCTTG
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTGTCATCTT
VGCTGWCAVB--
A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCATCTT-
AACCCTTTGATCTTT
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T