Information for 17-TTTCTCAATTGT (Motif 17)

A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C G T A C G T A C T G C G T A A C T G C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background173.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTCTCAATTGT----
-NNATNAATTGTTTNN
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTTCTCAATTGT-------
--AATCAATTGTTCCGCTA
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTCTCAATTGT------
-ANNTCTATTGTTCNNNA
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTTCTCAATTGT------
-GTATCTATTGTTCTTTA
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TTTCTCAATTGT------
----AAAATTGTTATGAA
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TTTCTCAATTGT---
-----CCATTGTTNY
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTTCTCAATTGT-------
---TTCAATTGTTCTAAAA
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTCAATTGT
GTTGCGCAAT---
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTTCTCAATTGT--
-----CCATTGTTC
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PRDM1/MA0508.3/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTTCTCAATTGT
TTCTTTCTCTT----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T A C G T A C G T A C G T