Information for 23-TCATCCTTAA (Motif 34)

A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C T G C G T A
p-value:1e-2
log p-value:-6.303e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif83.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets185.0 +/- 0.0bp
Average Position of motif in Background114.6 +/- 94.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCATCCTTAA---
TATCATAATTAAGGA
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCATCCTTAA
NNCTAATCCCNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCATCCTTAA
NYTAATCCYB--
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCATCCTTAA
YCATCMATCA
A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

HOXB4/MA1499.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCATCCTTAA
--ATCATTAG
A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A
A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCATCCTTAA-----
GACNTCATTAATAANN
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCATCCTTAA--
--GTCGTAAAAT
A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCATCCTTAA-
TTAATNATTAAC
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCATCCTTAA
ATAATCCC---
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCATCCTTAA--
TTAATGTTTAACC
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C