Information for 2-AGCGGTTGGC (Motif 2)

C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A A G T C A G T C A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGCGGTTGGC--
---GGTTGGCAT
C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGCGGTTGGC-----
NGTAGGTTGGCATNNN
A C G T C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGCGGTTGGC---
----NTTGGCANN
C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCGGTTGGC
BRRCVGTTDN-
A C G T C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCGGTTGGC
TGGCAGTTGG-
A C G T C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCGGTTGGC
GGCVGTTR--
C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGCGGTTGGC--
CACGGCAGTTGGTNN
A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGCGGTTGGC---
---NNTTGGCANN
C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCGGTTGGC
TTGCGGTTT--
A C G T C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCGGTTGGC
NNCAGTTGNN
C G T A A C T G A G T C A C T G A C T G A C G T A C G T A C T G A C T G A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T