Information for 2-AGAGAGCA (Motif 36)

C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A C G T A G T C A C G T A G T C A G C T
p-value:1e-2
log p-value:-6.389e+00
Information Content per bp:1.916
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif4834.2
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets123.5 +/- 22.5bp
Average Position of motif in Background98.8 +/- 153.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGAGAGCA---
-GGGAGGACNG
C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T A C G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGCA
RHHCAGAGAGGB
A C G T A C G T A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

ZNF263/MA0528.2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGCA--
GGGGGGAGGAGG
A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T A C G T
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGCA-------
NNNNTGAGCACTGTNNG
A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PRDM1/MA0508.3/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAGCA
NAGAGAAAGNA
A C G T A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGCA
BTBRAGTGSN
A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGCA-
TTGAGTGSTT
A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGAGAGCA--
NNNACCGAGAGTNNN
A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGCA-
CTTGAGTGGCT
A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

SPI1/MA0080.5/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGAGAGCA---------
AAAAAAGAGGAAGTGAAAAA
A C G T A C G T A C G T C T G A A C T G C G T A A C T G C G T A A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A