Information for 2-GATTGGACCC (Motif 2)

A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets165.0 +/- 0.0bp
Average Position of motif in Background113.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYC/MA1644.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GATTGGACCC
NCTGATTGGNN--
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GATTGGACCC
NCTGATTGGNN--
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGACCC
CCGATTGGCT--
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGACCC
TTGATTGN----
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGACCC------
NNANTTGACCCCTNNNN
A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGACCC-
TGATTGGCTANN
A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGACCC
GGGATTGCATNN
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

NFYB/MA0502.2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATTGGACCC
CTCATTGGCCAG
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

Plagl1/MA1615.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GATTGGACCC----
-NNTGGCCCCAGNN
A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGACCC-----
NNATTGGACTTTNGNN
A C G T A C T G C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C