Information for 7-GCCAGGCCAG (Motif 16)

A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.804e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background96.3 +/- 89.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCCAGGCCAG
-CTAGGCCT-
A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCAGGCCAG
-CNAGGCCT-
A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCCAGGCCAG---
--AAGGCAAGTGT
A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCAGGCCAG-
-CAAGGHCANV
A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCAGGCCAG------
--CAGGCCNNGGCCNN
A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGGCCAG
ATGCCAGACN--
A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCAGGCCAG-
AAGTTCAAGGTCAGC
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

NR5A1/MA1540.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGCCAG
GTCAAGGTCAC
A C G T A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ATF6/MA1466.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGGCCAG--
NTGCCACGTCATCA
A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T
T A G C G A C T C A T G G T A C G A T C C T G A A G T C C T A G G A C T G T A C C T G A A G C T T G A C T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGCCAG
NTCAAGGTCA-
A C G T A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T