Information for 19-GAGTGATCTC (Motif 37)

A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A G T C
p-value:1e-2
log p-value:-6.868e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background114.0 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAGTGATCTC
--GTGACCTT
A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGATCTC-
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGATCTC-
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATCTC-----
TNNNATGATTTCNNCNN
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

MSANTD3/MA1523.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATCTC
GTGAGTGNAC--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTGATCTC---
TTATGATGTCATA
A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGTGATCTC-
-ATTGATTYND
A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGTGATCTC-
---TGACCYCT
A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGATCTC
TTTGATTGATGN-
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGTGATCTC-
---TGACCTYA
A C T G C G T A A C T G A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A