Information for 15-CTCATTAGGT (Motif 28)

A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-6.970e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background97.4 +/- 69.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CTCATTAGGT
NNCTCATTAT--
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTAGGT--
GCAACCTCATTATNNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTCATTAGGT
AGCTCATTAT--
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTAGGT--
NNNACCTCATTATCNTN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0058.1_Hoxb3/Jaspar

Match Rank:5
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTAGGT--
TNNNACTAATTAGNTCA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

HOXC4/MA1504.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCATTAGGT
GTCATTAA--
A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T

GSX2/MA0893.2/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCATTAGGT
GTAATTAG--
A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
T A C G G A C T T G C A C T G A A G C T A C G T C T G A C T A G A C G T A C G T

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CTCATTAGGT
NGCTAATTAG--
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
A T G C T A C G A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCATTAGGT
ATCATTAG--
A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCATTAGGT
ATCATTAG--
A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C T G A C G T
T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G A C G T A C G T