Information for 2-GAAGCTTC (Motif 6)

A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
p-value:1e-2
log p-value:-6.426e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif151.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets195.5 +/- 0.5bp
Average Position of motif in Background96.7 +/- 82.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GAAGCTTC
CAAGCTT-
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGCTTC-------
TTCTAGAANNTTCCAGAANN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GAAGCTTC-
---GCTTCC
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTC
TTCTAGAACGTTC
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCTTC-----
TAGAANVTTCTAGAA
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTC
TTCTAGAACGTTC
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAGCTTC-----
GAANGTTCTAGAA
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

OSR2/MA1646.1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTC
AAACAGAAGCAG-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAAGCTTC-
ADGGYAGYAGCATCT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAGCTTC-
CGCAGCTGCG
A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G