Information for 18-CCAGGAGGCATT (Motif 17)

A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background131.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGGCATT
AGCAGGGGGCGC-
A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCAGGAGGCATT
CTCCCTGGGAGGCCN-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGGCATT
CACAGCAGGGG--
A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGAGGCATT
ATTTCCCAGVAKSCY--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAGGAGGCATT
TGCCCCAGGGCA--
A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAGGAGGCATT
-GATGAGTCATN
A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGGAGGCATT
TGCCCCAGGGCA--
A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGGCATT
ANCAGGATGT---
A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAGGAGGCATT
-HAWGRGGCCM-
A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T
A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCAGGAGGCATT-
TACCCACAATGCATTG
A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G