Information for 7-GTTCACTAGC (Motif 20)

A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C
p-value:1e-3
log p-value:-8.568e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background122.7 +/- 97.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTTCACTAGC---
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTCACTAGC----
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTTCACTAGC
GTTAACTAGN
A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

VDR/MA0693.2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTTCACTAGC
TGAGTTCA-----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTTCACTAGC--
ACTTAGTTAACTAAAAA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTTCACTAGC----
ATGTACAGTAGCAAAG
A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

NR1I3/MA1534.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTCACTAGC
AAAGTTCAT----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTCACTAGC
TTTCATTRCC
A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C
G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTCACTAGC-
AGGTCTCTAACC
A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTCACTAGC
NTTTTACGAGN
A C G T A C T G A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C