Information for 16-TGATGAAGATTA (Motif 20)

A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G T A
p-value:1e-3
log p-value:-9.171e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGATGAAGATTA-
--AAGAGGATTAG
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGATGAAGATTA--
GAATGACGAATAAC
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

GATA1/MA0035.4/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGATGAAGATTA---
----NNAGATTAGAN
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGATGAAGATTA-
-----RGGATTAR
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGATGAAGATTA
TAATGATGATCACTA
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGATGAAGATTA
--ATGAATATTC
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGATGAAGATTA--
----VRGGATTARN
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGATGAAGATTA--
----GNGGATTAGN
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGATGAAGATTA----
CGTTGGGGATTAGCCT
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGATGAAGATTA-----
TGAACCGGATTAATGAA
A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A