Information for 12-GGCTCCCAAAAA (Motif 13)

A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCTCCCAAAAA
-GCTCCG-----
A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCTCCCAAAAA-
AAGCCCCCCAAAAAT
A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTCCCAAAAA
-GCTCGTAAAAA
A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCTCCCAAAAA------
-GTTCAAAAAAAAAATTC
A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTCCCAAAAA--
AAAGCTCGTAAAATTT
A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

E2F4/MA0470.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGCTCCCAAAAA
NAATGGCGCCAAAA--
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCTCCCAAAAA--
AAACCTCGTAAAATTT
A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

E2F3/MA0469.3/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGCTCCCAAAAA
ATTTTGGCGCCAAAAT-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A
C T G A C G A T C G A T G C A T C A G T T A C G C A T G G A T C C T A G G T A C A T G C G T C A C G T A C G T A G C T A G A C T A C G T

Stat5b/MA1625.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCTCCCAAAAA--
CATTTCCCAGAAATC
A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCTCCCAAAAA
TTTGGCGCCAAA---
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T