Information for 1-CCTAATTTAAGC (Motif 4)

A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTAATTTAAGC
-CTATTTTTGG-
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

ARGFX/MA1463.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTAATTTAAGC
TCTAATTAAA--
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTAATTTAAGC
GCTATTTTTAGC
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

DUX4/MA0468.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTAATTTAAGC-
--TAATTTAATCA
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T
A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A

TLX2/MA1577.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTAATTTAAGC
-CTAATTAN---
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
A C G T A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTAATTTAAGC--
-CTAATTTAATCAA
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T A C G T
A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTAATTTAAGC
NCTAATTAANN-
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTAATTTAAGC-
NNTCTATTTTTAGNN
A C G T A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTAATTTAAGC
GCTATTTTTGGM
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTAATTTAAGC
KCTATTTTTRGH
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C