Homer de novo Motif Results (motif_results/SRR11563612_amplicon1_ecDNA_3//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2
Total background sequences = 73000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A G T C C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)OVOL1/MA1544.1/Jaspar(0.809)
More Information | Similar Motifs Found
motif file (matrix)
2 * A C G T A G T C A C T G A G T C A G T C A C T G A C T G A G T C A G T C A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
3 * A C T G C G T A C G T A A C T G A G T C A C T G C G T A A C T G A G T C A G T C C G T A A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)POL006.1_BREu/Jaspar(0.631)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A A C T G A G T C C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)TFAP2A/MA0003.4/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0196.1_Zbtb7b_2/Jaspar(0.612)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G A C G T A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0063.1_Sox13_1/Jaspar(0.766)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0183.1_Sry_2/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C T G A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PRDM4/MA1647.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T C G T A A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)POU6F2/MA0793.1/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A C G T C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.684)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A A G T C A C G T A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)ZBTB26/MA1579.1/Jaspar(0.814)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A C G T A A G T C C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)ONECUT1/MA0679.2/Jaspar(0.623)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A A C G T A C G T C G T A 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)DMRTC2/MA1479.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0170.1_Sox17_2/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C T G A G T C C G T A C G T A C G T A A G T C A C G T A C T G A G T C A C G T A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer(0.614)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C T G A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.698)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C T G A C G T 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0066.1_Sox17_1/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)MF0010.1_Homeobox_class/Jaspar(0.744)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A C G T A C G T C G T A A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PB0069.1_Sox21_1/Jaspar(0.733)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)PRDM4/MA1647.1/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G C G T A C G T A C G T A A C G T C G T A A G T C A G T C C G T A A C G T A C T G A G T C 1e-4-1.072e+0150.00%0.00%0.0bp (0.0bp)RELA/MA0107.1/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A C G T A A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A 1e-3-8.418e+0050.00%0.01%0.0bp (65.0bp)ETS(ETS)/Promoter/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C G T C G T A C G T A 1e-3-8.418e+0050.00%0.01%0.0bp (24.0bp)PH0148.1_Pou3f3/Jaspar(0.749)
More Information | Similar Motifs Found
motif file (matrix)
24 * C G T A A C G T C G T A C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G 1e-3-8.322e+0050.00%0.01%0.0bp (65.4bp)Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer(0.628)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G C G T A 1e-3-7.585e+0050.00%0.03%0.0bp (67.6bp)MYB/MA0100.3/Jaspar(0.778)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C T G C G T A 1e-3-7.501e+0050.00%0.03%0.0bp (53.5bp)HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C A G T C 1e-3-7.194e+0050.00%0.04%0.0bp (66.0bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.695)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G T A A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T A G T C 1e-3-6.936e+0050.00%0.05%0.0bp (70.1bp)Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer(0.765)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C G T A 1e-2-6.626e+0050.00%0.07%0.0bp (70.3bp)PH0151.1_Pou6f1_1/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A G T C C G T A A G T C A G T C A G T C A G T C A G T C C G T A A C T G 1e-2-6.430e+0050.00%0.08%0.0bp (68.2bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.764)
More Information | Similar Motifs Found
motif file (matrix)