Information for 1-TTAAGAATGATA (Motif 2)

A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.0 +/- 0.0bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTAAGAATGATA-
NNNTAACAATTATAN
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTAAGAATGATA-------
--AATNTTGATACCCTATN
A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTAAGAATGATA-------
--ANNNATGATACCCCATC
A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTAAGAATGATA-
BAGTCATANTGAAAG
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTAAGAATGATA--
AATGAACAATGGAATT
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGAATGATA
NNTNANAACAATTNNA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGAATGATA---
WNAGTCADAVTGAAACTN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGAATGATA
NNCTNAATTATGANN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTAAGAATGATA
-NAACAAT----
A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTAAGAATGATA----
-----AAGGATATNTN
A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T