Information for 11-AAATGTCTGGTA (Motif 13)

C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.121e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AAATGTCTGGTA---
NNTNNTGTCTGGNNTNG
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAATGTCTGGTA
--CTGTCTGG--
C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAATGTCTGGTA-
---GGTCTGGCAT
C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAATGTCTGGTA
---TGTCTAGA-
C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAATGTCTGGTA
VBSYGTCTGG--
C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAATGTCTGGTA
--TWGTCTGV--
C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAATGTCTGGTA---
---TGTCTGDCACCT
C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZFP42/MA1651.1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAATGTCTGGTA---
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

NR4A1/MA1112.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAATGTCTGGTA
TTAAAGGTCAAA--
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAATGTCTGGTA
AAAATTGTTATGAA
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C G T C G T A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A