Information for 24-TTTACATGTAGG (Motif 24)

A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TTTACATGTAGG--
NNTTTTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTTACATGTAGG--
ANTATTACATGTANNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTTACATGTAGG--
NNTATTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TTTACATGTAGG---
TAAATACATGTAAAATT
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TTTACATGTAGG--
ANTTNTACATGTANTTN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TTTACATGTAGG--
ANTNNTACATGTANNTN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

POU5F1/MA1115.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTACATGTAGG
NATTTGCATNN---
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTACATGTAGG
TTCATTTGCATAT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Foxl2/MA1607.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTACATGTAGG
NNTGTTTACATANN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTACATGTAGG
BTVATTWGCATA----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T