Information for 13-TGTAAGTGTTTG (Motif 13)

A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTAAGTGTTTG-
NTTAAGTGGTTNN
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGTAAGTGTTTG
-TTAAGTGCTT-
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGTAAGTGTTTG
-NTAATKGTTT-
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGTAAGTGTTTG
-TTAAGTGGT--
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTAAGTGTTTG--
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

ZSCAN4/MA1155.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTAAGTGTTTG--
TTTTCAGTGTGTGCA
A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTAAGTGTTTG
-TTRAGTGSYK-
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTAAGTGTTTG
-TTAAGTGC---
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTAAGTGTTTG--
CTATAATTGTTAGCG
A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTAAGTGTTTG
NTCAAGTGGN--
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T