Information for 20-AGCCAAATCAAT (Motif 20)

C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGCCAAATCAAT
--HNRAATCAAT
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T
A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

ONECUT1/MA0679.2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGCCAAATCAAT-----
-AAAAAATCAATAAATA
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AGCCAAATCAAT--
----TAATCAATTA
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCCAAATCAAT
TAAYCYAATCAA-
A C G T C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T
G C A T T C G A C T G A G A T C A G T C G A T C G T C A G T C A A C G T A G T C C G T A C T G A A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCCAAATCAAT----
CGACCCAATCAACGGTG
A C G T C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:AGCCAAATCAAT-
-----RRTCAATA
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCCAAATCAAT---
-AAAAAATCAATAAT
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AGCCAAATCAAT--
----DGATCRATAN
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCCAAATCAAT---
-AAAAAATCGATAAT
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCCAAATCAAT----
AATCAATTCAATAATT
C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T