Information for 2-CATGTGTTTAAS (Motif 2)

A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
Reverse Opposite:
A T C G G C A T A C G T C G T A C T G A C G T A G A T C G T C A G A T C G T C A A C G T A T C G
p-value:1e-6
log p-value:-1.518e+01
Information Content per bp:1.638
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif63.64%
Number of Background Sequences with motif4020.0
Percentage of Background Sequences with motif5.13%
Average Position of motif in Targets101.1 +/- 61.1bp
Average Position of motif in Background98.8 +/- 69.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTTTAAS
NNCATGTGNN----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTTTAAS
ACCATATGTT----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATGTGTTTAAS
NAACATATGTTT---
A C G T A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T A C G T

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATGTGTTTAAS
AACATATGTT----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
T C G A G T C A A G T C C T G A A G C T T C G A A C G T A T C G C A G T A G C T A C G T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTTTAAS
ANCATATGTT----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTTTAAS
GACATATGTT----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTTTAAS
GACATATGTC----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATGTGTTTAAS
CCATATGT-----
A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

ATOH7/MA1468.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTTTAAS
GACATATGTT----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATGTGTTTAAS
AACATATGTT----
A C G T A C G T A T G C C G T A A C G T C T A G A C G T C A T G G C A T G A C T C G A T C G T A C G T A T A G C
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T