Information for 7-GCCCTTGACACT (Motif 10)

A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background134.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGACACT
TGACCTTGAN---
A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGACACT
TGACCTTGACCT-
A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGACACT
TGACCTTGAV---
A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTGACACT
NTGACCTTGAN---
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGACACT
TGACCTTGACCT-
A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCCCTTGACACT
----TTGACAG-
A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGACACT
GCTGACCTTGAACTN
A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NR6A1/MA1541.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTGACACT---
NTGACCTTGAACTTGAN
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCCCTTGACACT
----TTGACAGG
A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGACACT
NATGACCTTGA----
A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T