| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 18.0 +/- 0.0bp |
| Average Position of motif in Background | 87.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGGACACTGAC-- NAGGTCANTGACCT |
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|
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGGACACTGAC- -RGGGCACTAACY |
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|
NR2F6(var.3)/MA1539.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGACACTGAC--- AAGGTCACTGACCTT |
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|
|
NR2F1(var.3)/MA1538.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGGACACTGAC--- AAGGTCANTGACCTT |
|
|
|
NR1H4::RXRA/MA1146.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGACACTGAC--- GAGGTCATTGACCTT |
|
|
|
NR4A2::RXRA/MA1147.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGACACTGAC--- GAGGTCATTGACCCC |
|
|
|
MSANTD3/MA1523.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAGGACACTGAC --GTACACTCAC |
|
|
|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGACACTGAC AAGGTCAC---- |
|
|
|
NR1H4/MA1110.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGGACACTGAC NAGGTCATTGA- |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAGGACACTGAC TRAGGTCA----- |
|
|
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