| p-value: | 1e-3 |
| log p-value: | -7.345e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 18.5 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 31.0 +/- 0.0bp |
| Average Position of motif in Background | 120.2 +/- 81.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TTAGCAACAC SCCTAGCAACAG |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | -8 |
| Orientation: | forward strand |
| Alignment: | --------TTAGCAACAC----- TGTGACCCTTAGCAACCGATTAA |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TTAGCAACAC- CCGCATAGCAACGGA |
|
|
|
RFX7/MA1554.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTAGCAACAC NTAGCAACG- |
|
|
|
RFX1/MA0509.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTAGCAACAC TNCCATAGCAACNN |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.71 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TTAGCAACAC- TACCATAGCAACGGT |
|
|
|
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TTAGCAACAC- -TTGCAACATN |
|
|
|
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------TTAGCAACAC TGTTKCCTAGCAACM- |
|
|
|
RFX3/MA0798.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTAGCAACAC TNCCATAGCAACNN |
|
|
|
NFIA/MA0670.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTAGCAACAC NNTTGGCANN-- |
|
|
|