Information for 2-ACCATGGCCCAG (Motif 3)

C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background149.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ACCATGGCCCAG---
-----TGCCCAGNHW
C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACCATGGCCCAG
AAACAATGGCA---
A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACCATGGCCCAG---
NNHYTGACCTAGWTT
C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACCATGGCCCAG
AAACAATGGAA---
A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACCATGGCCCAG
----AGGCCTAG
C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACCATGGCCCAG
VRAACAATGG-----
A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACCATGGCCCAG
VVRRAACAATGG-----
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACCATGGCCCAG--
CAGCATGACTCAGCA
A C G T C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

Plagl1/MA1615.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACCATGGCCCAG---
--NNTGGCCCCAGNN
C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACCATGGCCCAG
GAACAATGG-----
A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C C G T A A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T