Information for 2-GGTAAATATTAG (Motif 4)

A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background147.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGTAAATATTAG
NNTNNCAATATTAG
A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGTAAATATTAG
NNTNNCAATATTAG
A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTAAATATTAG
TATGTAAATAT---
A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTAAATATTAG
ATGTAAACATGT-
A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTAAATATTAG
TATGTAAATAT---
A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

FOXA2/MA0047.3/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTAAATATTAG
ATGTAAACATA--
A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTAAATATTAG
GGTTAAACATTAA
A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

FOXI1/MA0042.2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGTAAATATTAG
-GTAAACA----
A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTAAATATTAG
WAAGTAAAYA----
A C G T A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGTAAATATTAG
-GTAAACAT---
A C T G A C T G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G
A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T A C G T