Information for 14-TAATTAACTTTC (Motif 14)

A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-9.944e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background105.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1B/MA0703.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAACTTTC
TTAATTAAANT--
A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T A C G T A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTAACTTTC
NNNACTAATTAATTANC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C

PH0052.1_Hoxa5/Jaspar

Match Rank:3
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------TAATTAACTTTC
NTGAGCTAATTACCNT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAACTTTC
NCTAATTAANN---
A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:5
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTAACTTTC
CNNAGTAATTAATTNNC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

PH0074.1_Hoxd1/Jaspar

Match Rank:6
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TAATTAACTTTC
TAAACTAATTAGCTGTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PH0051.1_Hoxa4/Jaspar

Match Rank:7
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------TAATTAACTTTC
GATTATTAATTAACTTG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T

PH0174.1_Vax1/Jaspar

Match Rank:8
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------TAATTAACTTTC
CTNNGNTAATTAACNT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:9
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------TAATTAACTTTC
NTNAGGTAATTACCTT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:10
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------TAATTAACTTTC
TTGGGGTAATTAACGT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A G T C
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T A C G T A C G T