Information for 4-ATCAAAGCTTGA (Motif 4)

C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:ATCAAAGCTTGA
----AAGCTTG-
C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATCAAAGCTTGA
ANATCAAAGNN---
A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATCAAAGCTTGA
ACATCAAAGG----
A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATCAAAGCTTGA
ASATCAAAGG----
A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAAGCTTGA
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAAGCTTGA
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAAGCTTGA
VSCACATCAAAG-----
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATCAAAGCTTGA
AAAGATCAAAGGAA--
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAAGCTTGA
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCAAAGCTTGA
ATTAAA------
C G T A A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C T G C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T