Information for 8-CAGCTTTGTGTT (Motif 12)

A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.022e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background99.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAGCTTTGTGTT
-NNCTTTGTTNN
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGCTTTGTGTT
--CCTTTGTTTT
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGCTTTGTGTT
--CCWTTGTYYB
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCTTTGTGTT
--CCATTGTTTT
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTTTGTGTT--
NNNCCATTGTGTNAN
A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Stat2/MA1623.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGCTTTGTGTT---
--NNTTTCTGTTTCT
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTTTGTGTT---
ANTCCTTTGTCTNNNN
A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGCTTTGTGTT-
-BCCWTTGTBYKV
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGCTTTGTGTT
AGGVNCCTTTGT---
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGCTTTGTGTT
-NCCTTTGTTC-
A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T