| p-value: | 1e-3 |
| log p-value: | -7.501e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 25.5 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 62.0 +/- 0.0bp |
| Average Position of motif in Background | 96.2 +/- 53.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GAATGATAGA---- --ATGATKGATGRC |
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ZNF24/MA1124.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GAATGATAGA--- GAATGAATGAATG |
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PKNOX1/MA0782.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GAATGATAGA-- TTTGAGTGACAGCTA |
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HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GAATGATAGA--- ---TGATKGATGR |
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PBX1/MA0070.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAATGATAGA--- -TTTGATTGATGN |
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|
|
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GAATGATAGA---- --RTGATTKATRGN |
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PBX3/MA1114.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GAATGATAGA--- GGGTGAGTGACAGGCGG |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GAATGATAGA NTGATTGACAGN |
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DMRT3/MA0610.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAATGATAGA-- -NTTGATACATT |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAATGATAGA---- -NNTGATTGATGNN |
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