Information for 19-ACTCTTCTTGGC (Motif 20)

C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ACTCTTCTTGGC---
----TACTTGGCAGA
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Stat5a/MA1624.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTCTTCTTGGC--
--NNTTCTTGGAAN
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:ACTCTTCTTGGC---
------NTTGGCANN
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ACTCTTCTTGGC---
-----NNTTGGCANN
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTCTTCTTGGC
-CTATTTTTGG-
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

ETV4/MA0764.2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTCTTCTTGGC
-NNCTTCCTGN-
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T

ELF1/MA0473.3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTCTTCTTGGC-
NNCACTTCCTGNNN
A C G T C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T
A T G C A G T C A G T C G C T A A G T C G C A T A C G T G A T C T A G C A C G T A T C G A C G T G A C T G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTCTTCTTGGC
-CTGTTCCTGG-
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTCTTCTTGGC
GCTATTTTTAGC
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACTCTTCTTGGC---
----TTCTTGGAAAN
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T