Information for 20-CTCTGTTTGAGC (Motif 20)

A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCTGTTTGAGC
GTCTGTTTCTA-
A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTTTGAGC
NNCTTTGTTNN---
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTTTGAGC
VCCTCTCTGDDY----
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGTTTGAGC
NNTTTCTGTTTCT--
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTGTTTGAGC---
--GTCCTTGAGCCCG
A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTGTTTGAGC-
-GRTGMTRGAGCC
A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTTTGAGC
CCTTTGTTTT---
A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTTTGAGC---
NNCTTTGTTTTGNTNNN
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTTTGAGC-
TGACCTTTANTTGACCT
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

SOX4/MA0867.2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTTTGAGC
NCCTTTGTTC----
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C T G A G T C
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T A C G T