Information for 15-ATTCTAGGTCAC (Motif 15)

C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G C G T A C G T A A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATTCTAGGTCAC
-ATCAAGGTCA-
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTCTAGGTCAC---
AAWCTAGGTCARDNN
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

ESRRA/MA0592.3/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATTCTAGGTCAC-
GCTCAAGGTCACA
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ATTCTAGGTCAC
--TCAAGGTCAN
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATTCTAGGTCAC----
TATTCAAGGTCATGCGA
A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATTCTAGGTCAC-
--TCAAGGTCATA
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATTCTAGGTCAC
-BTCAAGGTCA-
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ATTCTAGGTCAC
----AAGGTCAC
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATTCTAGGTCAC
--TCAAGGTCAT
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATTCTAGGTCAC
-NTCAAGGTCA-
C G T A A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T