Information for 2-TCTGAGTGTGCT (Motif 3)

A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCTGAGTGTGCT
-GTGAGTGNAC-
A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAGTGTGCT---
NNGCGTGTGTGCNGCN
A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ZSCAN4/MA1155.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAGTGTGCT
TTTTCAGTGTGTGCA
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAGTGTGCT
NNTTGAGTGNN--
A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTGAGTGTGCT-
-NTGGGTGTGGCC
A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAGTGTGCT---
NNNNTTGTGTGCTTNN
A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAGTGTGCT
NNNTTGAGTGGNNN
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAGTGTGCT-
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTGAGTGTGCT
-TTGAGTGSTT-
A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAGTGTGCT
TGCTGASTCAGC-
A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T