Information for 19-CTCAATCTAC (Motif 35)

A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.658e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.0 +/- 0.0bp
Average Position of motif in Background151.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTCAATCTAC----
CGACCCAATCAACGGTG
A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTCAATCTAC-
TCCAATCCACA
A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCAATCTAC---
-SSAATCCACANN
A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCAATCTAC
CCATCAATCAAA
A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCAATCTAC
-CCAATCAA-
A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCAATCTAC
RRTCAATA---
A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCAATCTAC--
GAAGATCAATCACTTA
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

NKX2-5/MA0063.2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCAATCTAC
ACCACTCAAAA---
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCAATCTAC
HNRAATCAAT----
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCAATCTAC--
GAAGATCAATCACTAA
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A