Information for 3-GGTTTCTATC (Motif 3)

A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C
p-value:1e-4
log p-value:-9.944e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCTATC-
AGGTCTCTAACC
A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTTCTATC--
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGTTTCTATC--
TNTGGTTTCGATACN
A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTCTATC---
NTGGTTTCGGTTNNN
A C G T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCTATC
TGGTTTCAGT-
A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

RFX7/MA1554.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTTTCTATC
CGTTGCTAT-
A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTCTATC---
NCCGTTGCTANGNGN
A C G T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RFX1/MA0509.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCTATC---
CTGTTGCTATGGCA
A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PRDM4/MA1647.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGTTTCTATC
GTCTGTTTCTA--
A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCTATC---
CAGTTTCGNTTCTN
A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C