Information for 4-CTGTGTTCCTCG (Motif 5)

A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background131.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGTGTTCCTCG
--CTGTTCCTGG
A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTTCCTCG
YCTTTGTTCC---
A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTTCCTCG
NNNNTTGTGTGCTTNN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTTCCTCG
NNCTTTGTTNN---
A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTGTTCCTCG
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTGTTCCTCG
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTTCCTCG
GCTGTG-------
A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTTCCTCG
NCCTTTGTTC----
A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTGTTCCTCG-----
-NNNATTCCTCGAAAGN
A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTTCCTCG
NNGCGTGTGTGCNGCN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T