Information for 4-AGTATACCAC (Motif 28)

C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A C G T C G T A A C G T C G T A A G T C A C G T
p-value:1e-3
log p-value:-9.113e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background64.8 +/- 89.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGTATACCAC----
--NWAACCACADNN
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZNF75D/MA1601.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTATACCAC--
--TTTCCCACAN
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGTATACCAC---
---AAACCACANN
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

FOXN3/MA1489.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTATACCAC
-GTAAACAA-
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C
A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTATACCAC---
---AAACCACAGC
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTATACCAC----
---AAACCACAGAN
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTATACCAC--
--NAAACCACAG
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTATACCAC----
NNNATTTTACGACNNTN
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTATACCAC--
TGTCTGDCACCT
C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTATACCAC------
CATAAGACCACCATTAC
A C G T C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T