Information for 20-CTTATTTAAG (Motif 25)

A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A C G T A C G T A A C G T C G T A C G T A A C T G
p-value:1e-2
log p-value:-6.138e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif98.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background97.9 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0153.1_Prop1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTTATTTAAG----
CGAATTAATTAAGAAAC
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTTATTTAAG
RTTATGYAAB
A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

PH0011.1_Alx1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTTATTTAAG---
NNNAATTAATTAANGNG
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTATTTAAG---
NNCTNAATTATGANN
A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PH0136.1_Phox2b/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTATTTAAG----
CNNNTTAATTAATTNNN
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0173.1_Uncx/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTATTTAAG----
CNCNTTAATTAATTANN
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

LMX1B/MA0703.2/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTATTTAAG--
-TTAATTAAANT
A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T
A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

LMX1A/MA0702.2/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTATTTAAG
-NTAATTAA-
A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G
A C G T A C G T A G C T C G T A C T G A A C G T A C G T T C G A T C G A A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTTATTTAAG----
CGAATTAATTAACAATA
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTTATTTAAG---
NAAANTTATTGAANCAN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T