Information for 12-GAAAGTGTAAAC (Motif 12)

A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxl2/MA1607.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAAAGTGTAAAC---
-AATATGTAAACAAA
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAAAGTGTAAAC
GAAAGTGAAAGT
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGTAAAC-----
GGAAAGCGAAACCAAAAC
A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAAAGTGTAAAC
-AAGGTGTKAA-
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GAAAGTGTAAAC---
---TATGTAAACANG
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:6
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GAAAGTGTAAAC-
-----DGTAAACA
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAAAGTGTAAAC------
-AAAATGTAAACAAACAG
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXA3/MA1683.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GAAAGTGTAAAC---
----ATGTAAACATA
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAAGTGTAAAC
--AGGTGTGAAM
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAAAGTGTAAAC
-AAGGTGTGAA-
A C T G C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A C G T A C G T A A G T C
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T