Information for 3-AGTAGGCC (Motif 38)

C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T C G T A A G T C A C G T
p-value:1e-2
log p-value:-5.253e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif146.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets133.0 +/- 0.0bp
Average Position of motif in Background90.1 +/- 67.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGTAGGCC
ATAGTAGGTG
A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AGTAGGCC-
-CTAGGCCT
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------AGTAGGCC-
GCACAYAGTAGGKCY
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGTAGGCC-
-CNAGGCCT
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGTAGGCC--------
--CAGGCCNNGGCCNN
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGTAGGCC-----
TTNGGGTACGCCNNANN
A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

RORC/MA1151.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTAGGCC-
ATAAGTAGGTCA
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGTAGGCC--
WAABTAGGTCAV
A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTAGGCC-----
AAWCTAGGTCARDNN
A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

NR1D1/MA1531.1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTAGGCC--
GGGTCAGTAGGTCAG
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T
T C A G C A T G C T A G A C G T A G T C C G T A T A C G A C G T T C G A A C T G C T A G A C G T A G T C C T G A C T A G