Information for 8-AAGTCCAGCTTA (Motif 8)

C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A G T C A C G T A C T G A C T G C G T A A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAGTCCAGCTTA
TCCAAAGTCCAGA---
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAGTCCAGCTTA
TCCAAAGTCCAAA---
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAGTCCAGCTTA
GGCAAAAGTCCAATAA-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAGTCCAGCTTA
----CAAGCTT-
C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGTCCAGCTTA
AAAAGTCAA-----
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGTCCAGCTTA
CCAAGCCCAACCAG
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AAGTCCAGCTTA--
----HCAGCTGDTN
C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAGTCCAGCTTA
CAAAGKTCAA----
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.54
Offset:-9
Orientation:forward strand
Alignment:---------AAGTCCAGCTTA
CANAGNNCAAAGTCCA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGTCCAGCTTA
TRCATTCCAG----
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C G T C G T A
A G C T C T A G T G A C C G T A A C G T C G A T A G T C A G T C C T G A C A T G A C G T A C G T A C G T A C G T