Information for 11-GTCTGCTTAACT (Motif 12)

A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background186.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCTTAACT
VBSYGTCTGG------
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTTAACT
CTGTCTGG------
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCTGCTTAACT-----
ACTTAGTTAACTAAAAA
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTCTGCTTAACT---
-----GTTAACTAGN
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

GATA2/MA0036.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTCTGCTTAACT--
---TTCTTATCTTT
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCTGCTTAACT-
---NNCTTATCTN
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTCTGCTTAACT-
---NCCTTATCTG
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTTAACT
TWGTCTGV------
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCTGCTTAACT------
-AGCTGTTAACTAGCCGT
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTCTGCTTAACT--
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C