Information for 5-AGTTCATACATG (Motif 5)

C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background100.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCATACATG
AAAGTTCAT-----
A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGTTCATACATG
AATTGATACATT
C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGTTCATACATG
TGAGTTCA------
A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTTCATACATG
-NTTGATACATT
C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTTCATACATG-------
--TAAATACATGTAAAATT
C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGTTCATACATG-------
--AATATACATGTAAAATT
C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCATACATG--
NNCATTCATTCATNNN
A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTTCATACATG-------
--AAAATACATGTAATACT
C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTTCATACATG-------
--AATATACATGTAATATA
C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

TP73/MA0861.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTTCATACATG--
GACATGTCNNGACATGTN
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C T G A C G T A C G T
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C