| p-value: | 1e-3 |
| log p-value: | -8.236e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 12.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 192.0 +/- 0.0bp |
| Average Position of motif in Background | 70.2 +/- 60.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC- -----AGGTCA |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC- ---TRAGGTCA |
|
|
|
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATCTTAGGTC- GGTCANYTGAGGWCA |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC----- AAWCTAGGTCARDNN |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC-- ----GAGGTCAT |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATCTTAGGTC- NRBCARRGGTCA |
|
|
|
ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC ATAGTAGGTG |
|
|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC--- --CAAAGGTCAAA |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCTTAGGTC-- TATAAGTAGGTCAA |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ATCTTAGGTC-- ---CGAGGTCAC |
|
|
|