Information for 3-AGCTTTTAGCCA (Motif 4)

C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTTTTAGCCA
ANCGTTTANN--
C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCTTTTAGCCA
CAAGCTT-------
A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BARHL1/MA0877.2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCTTTTAGCCA
-NCGTTTAN---
C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A
A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T A C G T

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTTTAGCCA---
NTGACCTTTGACCTANAT
A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
T G C A G A C T T C A G T G C A G T A C A G T C A G C T G A C T G A C T T C A G T G C A G A T C G T A C A G C T T G C A A G T C C G T A C G A T

ZBTB6/MA1581.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTTTTAGCCA-
GTCCTTGAGCCCG
C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCTTTTAGCCA---
GACTTTTAWTTTGAA
C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGCTTTTAGCCA----
----ACTAGCCAATCA
C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCTTTTAGCCA---
ANATTTTTGCAANTN
C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

MSC/MA0665.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCTTTTAGCCA
AACAGCTGTT-----
A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTTTAGCCA
CAGCTGTT-----
A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T