Information for 3-GTTCAGAATGAG (Motif 3)

A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTCAGAATGAG-----
AAACATAATGAGGTTGC
A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTCAGAATGAG----
NNTNNACAATGGGANNN
A C G T A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTTCAGAATGAG--
----ATAATGAGGT
A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTCAGAATGAG-----
GACGATAATGAGCTTGC
A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTCAGAATGAG--
CTTTCANTATGACTV
A C G T A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTTCAGAATGAG--
----NTAATGAGCT
A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

VDR/MA0693.2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTTCAGAATGAG
TGAGTTCA-------
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTTCAGAATGAG---
NAGTTTCABTHTGACTNW
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTCAGAATGAG
RHHCAGAGAGGB
A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

RARA::RXRA/MA0159.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTTCAGAATGAG----
AGGTCACGGAGAGGTCA
A C G T A C T G A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A