Information for 6-GTCTGGAAAATC (Motif 7)

A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background135.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GTCTGGAAAATC
---TGGAAAA--
A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTCTGGAAAATC
-NATGGAAAAN-
A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTCTGGAAAATC
-AATGGAAAAT-
A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTCTGGAAAATC
-AATGGAAAAT-
A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGAAAATC
GGTCTGGCAT---
A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTCTGGAAAATC
-NNTGGAAANN-
A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTCTGGAAAATC
-AATGGAAAAT-
A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A C G T T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGGAAAATC
NNTNNTGTCTGGNNTNG-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Smad4/MA1153.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGAAAATC
TGTCTAGA-----
A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGAAAATC
CTGTCTGG------
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A C G T A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T