Information for 13-GGGACCTTAC (Motif 23)

A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.720e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background115.1 +/- 100.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGACCTTAC
GTGACCTT--
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGACCTTAC---
NNGCACCTTTCTCC
A C G T A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NR2F2/MA1111.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGACCTTAC
NNTGACCTTTN
A C G T A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGACCTTAC
GGGAATTTCC
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGACCTTAC
NTGACCTTGA
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGACCTTAC---
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGACCTTAC
-TGACCTYA-
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGACCTTAC--
GTGACCTTGRVN
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGACCTTAC
-TGACCT---
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGACCTTAC
GCGGACCBWA-
A C G T A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A A C G T