Information for 6-TCATCTGAGATC (Motif 6)

A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCATCTGAGATC
NNCATCTGNN---
A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCATCTGAGATC
AGATCACCTGATCT-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C T G A T C A G T C G A G C A T A T G C G C T A A T G C T A G C G C A T A T C G G C T A A G C T A G T C G A C T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCATCTGAGATC
NNAACATCTGTNN--
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T A C G T A C G T

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCATCTGAGATC-
GGTCACCTGAGGTCA
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C A C G T
C A T G A C T G A G C T A T G C C G T A A T G C G T A C G A C T T A C G C T G A A C T G A C T G G C A T A T G C C T G A

TWIST1/MA1123.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATCTGAGATC
NNACATCTGGNNN-
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATCTGAGATC
NNCCATCTGTNNN-
A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCATCTGAGATC
CCNNACCATCTGGCCTN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCATCTGAGATC------
-NNNCTGATATCTCNNNN
A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

USF1/MA0093.3/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCATCTGAGATC
TGGTCATGTGACCT-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T A C G T

USF2/MA0526.3/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCATCTGAGATC
TGGTCATGTGACCT-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C A G T C T A G T C A G A G C T A T G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G C A T A C G T