Information for 10-CAATGGATTTCA (Motif 12)

A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets164.0 +/- 0.0bp
Average Position of motif in Background111.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAATGGATTTCA
AAACAATGGAA----
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAATGGATTTCA
--ATTGATTYND
A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAATGGATTTCA
AAACAATGGCA----
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAATGGATTTCA
TAATTGATTA--
A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CAATGGATTTCA
AATGAACAATGGAATT--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAATGGATTTCA
VRAACAATGG------
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAATGGATTTCA
GAACAATGG------
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAATGGATTTCA
VVRRAACAATGG------
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PAX3/MA0780.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAATGGATTTCA
TAATCGATTA--
A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAATGGATTTCA
TAATCGATTA--
A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C C G T A
C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A A C G T A C G T