Information for 15-TTACCGATTTTA (Motif 17)

A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.121e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets154.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT2/MA0756.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGATTTTA-
ATTATCGATTTTTT
A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGATTTTA-
NTTATTGATTTTTT
A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTACCGATTTTA-
NNTTTATTGATTTTTT
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGATTTTA
BTGACCTAVTTW-
A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGATTTTA
NAAACCGGTTTT-
A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTACCGATTTTA
TTATCGATTA--
A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGATTTTA-
TTGACCTANTTATN
A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0136.1_IRC900814_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGATTTTA---
TTTTACGACTTTCCAT
A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

RORC/MA1151.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTACCGATTTTA
TGACCTANTTAN
A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTACCGATTTTA--
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G