Information for 2-GTGGCAGCCC (Motif 14)

A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.804e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background65.0 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTGGCAGCCC
-TGCCAGCB-
A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTGGCAGCCC
AGGTGHCAGACA
A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCAGCCC
VBTGWCAGCB-
A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCAGCCC-
AGGTGNCAGACAG
A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGGCAGCCC
TTGCCAAG--
A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGGCAGCCC---
ACTATGCCAACCTACC
A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCAGCCC
TGAGTGACAGSC-
A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGGCAGCCC
TTGACAGC--
A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTGGCAGCCC
----CAGCC-
A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCAGCCC
NTTGGCANN--
A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T