Information for 2-ACATAATCATTG (Motif 2)

C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACATAATCATTG--
AACAATAACATTGTT
A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACATAATCATTG
CTAATTTAATCAA--
A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ACATAATCATTG
----AATTATT-
C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACATAATCATTG
NWTAAYCYAATCAWN-
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACATAATCATTG
TAATTTAATCA---
A C G T A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACATAATCATTG--
--TTAATNATTAAC
C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACATAATCATTG
-AATAAACAATN
C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACATAATCATTG
GAATATTCAT--
C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACATAATCATTG---
TACTTAATTAATNNAN
A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACATAATCATTG
-GNTAATTANN-
C G T A A G T C C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C T G
A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T