Information for 8-CTAATTTCTGTT (Motif 9)

A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat2/MA1623.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTAATTTCTGTT---
--NNTTTCTGTTTCT
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

HOXD3/MA0912.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAATTTCTGTT
CTAATTAC----
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C A C G T A C G T A C G T A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTAATTTCTGTT--
--NCTTCCTGTTNN
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A G T C G C A T A G C T A G T C G A T C G C A T A T C G A G C T A C G T A G C T A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTAATTTCTGTT--
--AGTTTCAKTTTC
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PH0033.1_Gbx1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTAATTTCTGTT
TGCCACTAATTAGTGTA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTAATTTCTGTT-
ANCGCTAATTGGTCTNN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

GBX2/MA0890.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTAATTTCTGTT
NNTAATTGNN---
A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T
T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T A C G T A C G T A C G T

PH0052.1_Hoxa5/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATTTCTGTT
NTGAGCTAATTACCNT-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T A C G T

TLX2/MA1577.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTAATTTCTGTT
CTAATTAN----
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAATTTCTGTT--
--AGTTTCAGTTTC
A G T C A C G T C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C