Information for 2-TCAGGTCTAGGA (Motif 4)

A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background172.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCAGGTCTAGGA--
--AGGTCAAGGTCA
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAGGTCTAGGA--
--AGGTCAAGGTCA
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCAGGTCTAGGA
---TGTCTAGA-
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAGGTCTAGGA
--AGGCCTNG--
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAGGTCTAGGA
--AGGCCTAG--
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCAGGTCTAGGA---
-CAGGCCNNGGCCNN
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF135/MA1587.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCAGGTCTAGGA
TCAGGAGGTCGAGG-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCAGGTCTAGGA-----
--NGNTCTAGAACCNGV
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGGTCTAGGA
VCAGGTRDRY--
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCAGGTCTAGGA------
-NNGATCTAGAACCTNNN
A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G