Information for 2-CTCACCAAAG (Motif 2)

A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
p-value:1e-4
log p-value:-9.944e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7/MA0769.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCACCAAAG--
-ANATCAAAGNN
A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T A C G T
A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCACCAAAG
VSCACATCAAAG
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCACCAAAG-----
NNNAGATCAAAGGANNN
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCACCAAAG-
-AAACCACAGC
A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCACCAAAG-----
TATAGATCAAAGGAAAA
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCACCAAAG--
-AAAACAAAGAA
A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T A C G T
A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCACCAAAG-----
NANAGATCAAAGGGNNN
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCACCAAAG-
-ASATCAAAGG
A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T
A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCACCAAAG
NAAACCACAG
A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCACCAAAG---
AAAGATCAAAGGAA
A C G T A G T C A C G T A G T C C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A