Information for 14-CTAAATTAAAAA (Motif 16)

A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.185e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background80.6 +/- 83.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0100.1_Lmx1a/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTAAAAA--
CGAATTAATTAAAAACC
A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0091.1_Lhx1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTAAAAA--
CGAATTAATTAATAATG
A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTAAATTAAAAA--
NNAATTAATTAAAAANN
A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTAAAAA--
GGGTTTAATTAAAATTC
A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

LMX1B/MA0703.2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAAATTAAAAA
-TTAATTAAANT
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A
A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTAAATTAAAAA
----ATTAAA--
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTAAAAA--
CGAATTAATTAAATACT
A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTAAATTAAAAA
-NTAATTAATAT
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTAAATTAAAAA---
TAATTAATTAATAACTA
A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTAAAAA--
GAAATTAATTAAATAAT
A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T