Information for 9-GACTATTAGCAT (Motif 9)

A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GACTATTAGCAT-
----ATTTGCATA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GACTATTAGCAT-
----ATTTGCATA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GACTATTAGCAT-
-BTVATTWGCATA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GACTATTAGCAT--
----ATTTGCATAA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GACTATTAGCAT---
---AATTTGCATANT
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GACTATTAGCAT--
--TAATTTGCATAA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GACTATTAGCAT--
--TAATTTGCATAA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GACTATTAGCAT---
--AAATTAGCATAAT
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GACTATTAGCAT-
-CTCATTTGCATW
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GACTATTAGCAT----
TNTAATTTGCATACNA
A C T G C G T A A G T C A C G T C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A