Information for 21-TCCCAGACCTTA (Motif 22)

A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGACCTTA
ATGCCAGACN---
A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGACCTTA--
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Stat5b/MA1625.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCCCAGACCTTA
CATTTCCCAGAAATC-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACCTTA
--CCAGACAG--
A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAGACCTTA
NNTTCCCANN-----
A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACCTTA
--CNAGGCCT--
A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACCTTA-
--NNTGACCTTTN
A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A A C G T
A C G T A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCCAGACCTTA
-TCTAGACA---
A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGACCTTA
HTTTCCCASG-----
A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACCTTA
--CCAGACRSVB
A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C