Information for 20-GCCATCAGTG (Motif 31)

A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C
p-value:1e-2
log p-value:-6.899e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background105.1 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCCATCAGTG-
NNNCCATCTGTNN
A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCAGTG--
NNCCATCTGTNNN
A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCCATCAGTG
GCCATCTGTT
A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCATCAGTG
ATCCATTAGCA
A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCATCAGTG
ACCATCTGTT
A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCATCAGTG
GGCCATTAAC-
A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCATCAGTG
NNCATCTGNN
A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

YY2/MA0748.2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCAGTG
CGCCGCCATNN---
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCAGTG-
RGCCATYAATCA
A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

CREB1/MA0018.4/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCAGTG
NATGACATCANNN
A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C T G
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A