Information for 24-GCAGGGAAGCTC (Motif 26)

A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCAGGGAAGCTC
----NGAAGC--
A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

ZNF528/MA1597.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGAAGCTC----
CCCAGGGAAGCCATTTC
A C G T A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

E2F6/MA0471.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGAAGCTC
GGGGGCGGGAAGG--
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGGGAAGCTC
CCTGGGAAAG--
A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAGGGAAGCTC-
---GGGAATTTCC
A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCAGGGAAGCTC
CTTCTGGGAAA---
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAGGGAAGCTC
-AAGGCAAGTGT
A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCAGGGAAGCTC
CACAGCAGGGG-----
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCAGGGAAGCTC-
------AAGCTTG
A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGGGAAGCTC-
-TGGGGAAGGGCM
A C T G A G T C C G T A A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A