Information for 1-TAAAGTAGCG (Motif 1)

A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAAAGTAGCG---
ATGTACAGTAGCAAAG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TAAAGTAGCG---
ATTTACAGTAGCAAAA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGTAGCG---
NNNTTAGGTAGCNTNT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAAAGTAGCG
NACAGTAGCN
A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGTAGCG---
NNTGTAGGTAGCANNT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAAAGTAGCG
DCYAAAAATAGM-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAAAGTAGCG
NTCAAGTGG--
A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAAAGTAGCG---
-AATGTAACAATT
A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAAAGTAGCG-
-ATAGTAGGTG
A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAAAGTAGCG---
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G