Information for 2-CTGGCTAGGCCT (Motif 2)

A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:CTGGCTAGGCCT
----CTAGGCCT
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:CTGGCTAGGCCT
----CNAGGCCT
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTGGCTAGGCCT-
GGGGCCGAGGCCTG
A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGGCTAGGCCT-
---GCTCGGSCTC
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGGCTAGGCCT---
NNGGCCACGCCTTTN
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SMAD5/MA1557.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGGCTAGGCCT
-TGTCTAGACA-
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGCTAGGCCT
-TGTCTAGACG-
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

ZNF682/MA1599.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCTAGGCCT-
NNAGGGGCTTGGCCNN
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

ZNF449/MA1656.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGGCTAGGCCT--
NNGGTTGGGCTTNN
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGCTAGGCCT
-TGTCTAGA---
A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C A G T C A C G T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T