Information for 8-GCTTGGAGTTCA (Motif 8)

A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background194.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GCTTGGAGTTCA
----TGAGTTCA
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCTTGGAGTTCA-
----AAAGTTCAT
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTTGGAGTTCA-
---CAAAGKTCAA
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTTGGAGTTCA
--CTGGAATGYA
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
A C G T A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTTGGAGTTCA
GKBCARAGGTCA
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCTTGGAGTTCA-
-----GAGGTCAT
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTTGGAGTTCA
----AGRGGTCA
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTTGGAGTTCA
-NCTGGAATGC-
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTTGGAGTTCA
--ATCAAGGTCA
A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGAGTTCA---
NNATTGGACTTTNGNN
A C G T A C T G A G T C A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C