| p-value: | 1e-4 |
| log p-value: | -1.072e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 111.0 +/- 0.0bp |
| Average Position of motif in Background | 153.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NFIA/MA0670.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTGCCAATTGAA GGTGCCAAGT--- |
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NFIX/MA0671.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTGCCAATTGAA CGTGCCAAG---- |
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NFIC/MA0161.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTGCCAATTGAA NNTGCCAAGNN-- |
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PH0171.1_Nkx2-1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTGCCAATTGAA--- TAAGCCACTTGAAATT |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTGCCAATTGAA TTGCCAAG---- |
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|
|
PB0068.1_Sox1_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTGCCAATTGAA----- -AATCAATTCAATAATT |
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PH0114.1_Nkx2-5/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTGCCAATTGAA--- TAAGCCACTTGAATTT |
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PH0111.1_Nkx2-2/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTGCCAATTGAA---- ATAACCACTTGAAAATT |
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|
NKX2-3/MA0672.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CTGCCAATTGAA --ACCACTTGAA |
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LHX2/MA0700.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTGCCAATTGAA -AACCAATTAAT |
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