Information for 9-GAGTAGTGTT (Motif 27)

A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A G T C A C G T C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.341e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background84.8 +/- 84.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAGTAGTGTT----
NNGTANTGTTTTNC
A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGTAGTGTT-
----ATTGTTA
A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTAGTGTT--
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAGTAGTGTT
----ATTGTT
A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

SOX8/MA0868.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTAGTGTT--
--CCATTGTTCT
A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGTAGTGTT--
NHGTCGTGAYDN
A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAGTGTT-----
NNTTTATTGTTCTNNN
A C G T A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGTAGTGTT------
TTCAATTGTTCTAAAA
A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAGTGTT-----
AANTTATTGTTCTNNA
A C G T A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAGTGTT------
CNNNTATTGTTCNNNNN
A C G T A C T G C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A