Information for 1-CATTTAAGCTAT (Motif 3)

A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A G T C A C G T A C G T C G T A C G T A C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0184.1_Tbp_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTTAAGCTAT-
CCGATTTAAGCGACC
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATTTAAGCTAT
ANCGTTTANN----
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATTTAAGCTAT
GCACTTAA-----
A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATTTAAGCTAT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATTTAAGCTAT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CATTTAAGCTAT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CATTTAAGCTAT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

BARHL1/MA0877.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAAGCTAT
NCGTTTAN-----
A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATTTAAGCTAT
ACCACTTAA-----
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CATTTAAGCTAT
ATAACCACTTAAA----
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T A C G T A C G T