Information for 2-CCGGGCTATC (Motif 10)

A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C T G A C T G
p-value:1e-4
log p-value:-1.034e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 0.0bp
Average Position of motif in Background56.5 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prdm15/MA1616.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGCTATC--
NNTCCAGGTTTTCCN
A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T
C T A G A G T C A C G T G A T C G A T C C T G A A C T G T C A G G A C T G A C T A G C T A G C T T G A C G A T C G A C T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGGGCTATC-----
NGCTGCGATATCGNCGC
A C G T A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCTATC------
GATGGGGTATCATTTTT
A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCTATC------
AATAGGGTATCATATAT
A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCTATC------
AATGGGGTATCACGTTT
A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCTATC------
AATAGGGTATCAATATT
A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGGGCTATC-
-GGGGATTTCC
A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCGGGCTATC
YCCDNTCCAGGTTTT-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCGGGCTATC
WDNCTGGGCA---
A C G T A C G T A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGGGCTATC------
AATAGGGTATCAATTAT
A C G T A G T C A G T C A C T G A C T G A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T