Information for 15-AAGAATGAAAAC (Motif 15)

C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGAATGAAAAC--
GAGAACCGAAACTG
C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Foxl2/MA1607.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGAATGAAAAC---
-AATATGTAAACAAA
C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGAATGAAAAC
HDGYAATGAAAN-
A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGAATGAAAAC
GGYAATGAAA--
C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGAATGAAAAC
GAATGAATGAATG-
A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGAATGAAAAC
BAGTCATANTGAAAG-
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAGAATGAAAAC-
---ACTGAAACCA
C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAGAATGAAAAC
AATGAACAATGGAATT
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGAATGAAAAC------
-AAAATGTAAACAAACAG
C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AAGAATGAAAAC-
WNAGTCADAVTGAAACTN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G