Information for 13-GTTCATGATA (Motif 34)

A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C C G T A A C G T A C T G C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.819e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background69.9 +/- 49.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTTCATGATA--
ACATTCATGACACG
A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTCATGATA
AAAGTTCAT----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTTCATGATA
TGAGTTCA-----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTTCATGATA
-NTAATGAT-
A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A
A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTCATGATA--
AAGGTCATGACCTT
A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATGATA
NTTTTACGAC-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTCATGATA-------
AATNTTGATACCCTATN
A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTCATGATA---
GTTAATGATTAAC
A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTCATGATA-------
ANNNATGATACCCCATC
A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATGATA
NNCTCATTAT-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T C G T A
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T