Information for 21-TTGATGGTTCTG (Motif 22)

A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TTGATGGTTCTG
NNNNNATTGATGNGTGN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGATGGTTCTG
GTTAATGGCC---
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGATGGTTCTG
NTAATKGTTT--
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGATGGTTCTG----
-AGATGCTRCTRCCHT
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGATGGTTCTG
TTTNATTGCY---
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGATGGTTCTG---
-TAATTGTTCTAAAC
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGATGGTTCTG--
NNTTTATTGTTCTNNN
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

OSR2/MA1646.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTGATGGTTCTG---
---NNGCTTCTGTNN
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGATGGTTCTG
TTTGATTGATGN-
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGATGGTTCTG--
GTATCTATTGTTCTTTA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A G T C A C G T A C T G A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A