| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 25.0 +/- 0.0bp |
| Average Position of motif in Background | 137.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAGTAGGCCAA WAABTAGGTCAV |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAAGTAGGCCAA TATAAGTAGGTCAA |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAGTAGGCCAA--- AAWCTAGGTCARDNN |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAGTAGGCCAA ATAAGTAGGTCA- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAGTAGGCCAA -AAYTAGGTCA- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAGTAGGCCAA -AAYTAGGTCA- |
|
|
|
ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAGTAGGCCAA ATAGTAGGTG-- |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAGTAGGCCAA -AATTAGGTCAC |
|
|
|
NFYB/MA0502.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AAAGTAGGCCAA---- ----NTGGCCAATGAG |
|
|
|
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AAAGTAGGCCAA GCACAYAGTAGGKCY- |
|
|
|