Information for 4-AACTTATNATAA (Motif 4)

G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A
Reverse Opposite:
A C G T G A C T C G T A A C G T C G T A C T G A G C A T C T G A C G T A A C T G A G C T A C G T
p-value:1e-5
log p-value:-1.288e+01
Information Content per bp:1.698
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif1790.0
Percentage of Background Sequences with motif2.28%
Average Position of motif in Targets120.0 +/- 42.2bp
Average Position of motif in Background98.3 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0064.1_Sox14_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AACTTATNATAA--
GCTAATTATAATTATC
A C G T A C G T G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACTTATNATAA--
TATAATTATAATATTC
A C G T A C G T G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACTTATNATAA--
NNTAATTATAATNANN
A C G T A C G T G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AACTTATNATAA-
AAATTAGCATAAT
G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACTTATNATAA--
TAAGATTATAATACGG
A C G T A C G T G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTTATNATAA--
NNNTTTNTAATACNG
A C G T G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACTTATNATAA
TAATTTGCATAA
G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AACTTATNATAA---
-----GTCATAAAAN
G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AACTTATNATAA-
-AATTTGCATANT
G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A A C G T
A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACTTATNATAA
TAATTTGCATAA
G T C A C T G A G T A C C G A T A G C T C G T A A G C T C G A T C G T A A C G T C T G A G T C A
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A