Information for 4-TGGAGGTCTATC (Motif 5)

A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGGTCTATC-
NNANTGGTGGTCTTNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

ZNF135/MA1587.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGGTCTATC
TCAGGAGGTCGAGG
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGGTCTATC
NNNATTGGGGGTNTCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

RUNX3/MA0684.2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGGTCTATC
NNTTGAGGTTNN--
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGAGGTCTATC
-AGRGGTCA---
A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGAGGTCTATC
YSTGGGTGGTCT---
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGGTCTATC
NTNTGGGGGGTCNNNA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGAGGTCTATC
ATCAAGGTCA---
A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGAGGTCTATC
-CGAGGTCAC--
A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGGTCTATC
TTCGGTGGTCGC--
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A G T C
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T A C G T