Information for 20-GAGCTCCCACCC (Motif 19)

A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GAGCTCCCACCC
--GGTCCCGCCC
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GAGCTCCCACCC--
--MCTCCCMCRCAB
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

KLF4/MA0039.4/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAGCTCCCACCC--
--CGCCCCACCCCC
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAGCTCCCACCC-
---CRCCCACGCA
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGCTCCCACCC
--GCTCCG----
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGCTCCCACCC-----
ANNTNCCCACCCANNAC
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGCTCCCACCC-
-YCCGCCCACGCN
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGCTCCCACCC----
NNAGTCCCACTCNNNN
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

ZNF75D/MA1601.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAGCTCCCACCC
--TTTCCCACAN
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C
A C G T A C G T G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGCTCCCACCC-
---GCCCCGCCCC
A C T G C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C