Information for 16-AAGTATCGCTGT (Motif 17)

C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C A C T G C G T A A C G T C G T A A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF6/MA1509.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAGTATCGCTGT
-AGTTTCGGT--
C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T
A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAGTATCGCTGT-
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AAGTATCGCTGT-
-------GCTGTG
C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAGTATCGCTGT--
NTGGTTTCGGTTNNN
A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGTATCGCTGT--
TNAGTTTCGATTTTN
A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGTATCGCTGT---
-AGTTTCGGTTTCGN
C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGTATCGCTGT---
-ATTATCGATTTTTT
C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGTATCGCTGT
AATGTATCAAT--
A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAGTATCGCTGT---
-ANTTTCGCTTTCGN
C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGTATCGCTGT-
-AGTTTCAGTTTC
C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C