Information for 7-CAGCAACCTTTC (Motif 8)

A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAACCTTTC
NTAGCAACG----
A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGCAACCTTTC
---CAAGCTT--
A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGCAACCTTTC---
---TGACCTTTNCNT
A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAACCTTTC
CCGCATAGCAACGGA--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------CAGCAACCTTTC--
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAACCTTTC
TACCATAGCAACGGT--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGCAACCTTTC
SCCTAGCAACAG---
A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCAACCTTTC
NCTANGTCAGCAAATTT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAACCTTTC
HWWGTCAGCAWWTTT--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGCAACCTTTC
AAGTCAGCANTTTTN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T