Information for 13-AAGACAGGGCCG (Motif 14)

C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGACAGGGCCG-
GGAGAAAGGTGCGA
A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGACAGGGCCG
--CACAGN----
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGACAGGGCCG
TTGACAGG----
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGACAGGGCCG
CCAGACAG-----
A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGACAGGGCCG
TTGACAGC----
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAGACAGGGCCG-
NNGACAGGTGCNN
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G A C G T
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGACAGGGCCG
-WDNCTGGGCA-
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGACAGGGCCG
TTGACAG-----
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAGACAGGGCCG-
NNGACAGGTGCNN
C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G A C G T
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGACAGGGCCG
CCAGACRSVB---
A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A G T C A G T C A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T