Information for 6-AGGTCACCTG (Motif 13)

C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background101.0 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AGGTCACCTG
AAGGTCAC---
A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGGTCACCTG---
-GCACACCTGKNC
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.77
Offset:-6
Orientation:forward strand
Alignment:------AGGTCACCTG
TCTCAAAGGTCACCTG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AGGTCACCTG
CAAAGGTCAAGGG
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

ZEB1/MA0103.3/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGGTCACCTG---
--CCCACCTGCGC
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGGTCACCTG--
--NNCACCTGNN
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TFEC/MA0871.2/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGTCACCTG--
-NGTCACGTGNN
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G

USF2/MA0526.3/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGTCACCTG----
NNGTCACATGACNN
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACCTG
TRAGGTCA----
A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGGTCACCTG-
-RYHYACCTGB
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C T G A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T