Information for 7-TCCATTGTAC (Motif 16)

A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A
p-value:1e-3
log p-value:-8.353e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background76.1 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTGTAC
NNCCATTGTNN
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTGTAC
NNCCATTGTNN
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TCCATTGTAC
NCCATTGTTC
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TCCATTGTAC-
-CCATTGTTYB
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TCCATTGTAC---
-CCATTGTTYYBB
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TCCATTGTAC
-CCATTGTTC
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCCATTGTAC
NCCATTGTTY
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX8/MA0868.2/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TCCATTGTAC-
-CCATTGTTCT
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C A C G T
A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TCCATTGTAC---
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCCATTGTAC-
-CCWTTGTYYB
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A G T C A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G