Information for 1-AGATTGACGC (Motif 1)

C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background145.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGATTGACGC
----TGACGT
C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGATTGACGC
-TATTGAYY-
C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGATTGACGC-
NNTGATTGATGNN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGATTGACGC--
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATTGACGC-
BTGABTGACAGS
A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGATTGACGC--
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTGACGC
TTTGATTGATGN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

ZFP57/MA1583.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGATTGACGC---
GCATTGCCGCAGT
C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGATTGACGC-
RTGATTKATRGN
A C G T C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGATTGACGC-
---ATGACGTA
C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A