Information for 17-CATTAGCAGG (Motif 32)

A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C A C G T C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-6.998e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background85.5 +/- 84.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CATTAGCAGG
ATCCATTAGCA--
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATTAGCAGG
CTCATTTGCATW
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATTAGCAGG
BTVATTWGCATA
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

HOXB4/MA1499.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATTAGCAGG
ATCATTAG----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CATTAGCAGG
ACTAATTAGC---
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATTAGCAGG
GTCATTAA----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATTAGCAGG
ATCATTAG----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G A C G T A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATTAGCAGG--
-CACAGCAGGGG
A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATTAGCAGG
YCATTAMC---
A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTAGCAGG
GTCATTAG----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G
T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G A C G T A C G T A C G T A C G T