Information for 3-GGTATTCTTAGA (Motif 4)

A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A C G T A A C T G C G T A C G T A A C G T C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background165.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.4/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGTATTCTTAGA-
NNTCTATTTTTAGNN
A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTATTCTTAGA---
---TTTCTNAGAAAN
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTATTCTTAGA
GCTATTTTTAGC
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTATTCTTAGA
GCTATTTATAGC
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTATTCTTAGA
TCTATTTATAGN
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Stat5a/MA1624.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGTATTCTTAGA--
--NNTTCTTGGAAN
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTATTCTTAGA----
NNNATTCCTCGAAAGN
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGTATTCTTAGA--
TTCTATTTTTAGNNN
A C G T A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTATTCTTAGA
KCTATTTTTRGH
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGTATTCTTAGA
-CTATTTTTGG-
A C T G A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C G T C G T A A C T G C G T A
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T