Information for 6-GCAGATTGTGCC (Motif 7)

A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0183.1_Sry_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGTGCC----
CNNNTATTGTTCNNNNN
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAGATTGTGCC----
AATCAATTGTTCCGCTA
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGTGCC
AACAGATGGT---
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAGATTGTGCC
-CTCATTGTC--
A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAGATTGTGCC
GGAACAGATGGCA--
A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAGATTGTGCC
GGACAGATGGCAG-
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGTGCC
AACAGATGGC---
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

CEBPA/MA0102.4/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAGATTGTGCC----
--NNATTGTGCAATNN
A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T T C G A G C A T C A G T C T A G G A C T C T A G G T A C G T C A C G T A A G C T G T C A G C T A

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCAGATTGTGCC-
GVACAGNMTGTYCTB
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

CEBPD/MA0836.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCAGATTGTGCC---
--NNATTGTGCAATN
A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C G A T T C G A G A C T C A G T C T A G G A C T C T A G G T A C G T C A C T G A A G C T G T C A