Information for 4-TCTGGCGA (Motif 20)

A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A G T C C G T A A C T G C G T A
p-value:1e-2
log p-value:-5.753e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif296.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets154.0 +/- 0.0bp
Average Position of motif in Background107.6 +/- 69.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TCTGGCGA----
TCTCGCGAGAAT
A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCGA------
CTCTCGCGAGATCTG
A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGA
GGTCTGGCAT
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCGA-----
GTTCTCGCGAGANCC
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBTB26/MA1579.1/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TCTGGCGA-
NNNNTTTCTGGAGNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGCGA
VBSYGTCTGG---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCGA
CTGTCTGG---
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCGA--
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTGGCGA-
NTTGGCANN
A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGA
TGTCTAGA--
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T