Information for 22-ATGAGAGGCAAC (Motif 22)

C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGAGGCAAC
CTTGAGTGGCT--
A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGAGAGGCAAC
BTGABTGACAGS
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

RFX7/MA1554.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATGAGAGGCAAC-
----NTAGCAACG
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATGAGAGGCAAC
-HAWGRGGCCM-
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGAGAGGCAAC--
TTTGAGTGACAGCTA
A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGAGAGGCAAC---
----AAGGCAAGTGT
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGAGAGGCAAC
NTGATTGACAGN
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NKX2-2/MA1645.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATGAGAGGCAAC
NNNTTGAGTGGNNN-
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGAGAGGCAAC
TTGAGTGSTT--
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATGAGAGGCAAC
TTGACAGC----
C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C C G T A C G T A A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T