Information for 14-CAGAAACACTTC (Motif 19)

A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G
p-value:1e-4
log p-value:-9.268e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGAAACACTTC
NAGAAACAGNN-
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGAAACACTTC--
-ATAACCACTTAAA
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGAAACACTTC-
---AAGCACTTAA
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGAAACACTTC-
---MRSCACTYAA
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

OSR2/MA1646.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGAAACACTTC
AAACAGAAGCAG---
A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAGAAACACTTC----
------CACTTCCTCT
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGAAACACTTC--
----ACCACTTGAA
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGAAACACTTC
AATAAACAATN-
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGAAACACTTC--
-----CCACTTGAA
A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Stat2/MA1623.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAACACTTC
AGAAACAGAAACT----
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A G T C
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T A C G T A C G T A C G T