Information for 9-AAGTTGACATCC (Motif 10)

C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAGTTGACATCC
-ARNTGACA---
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAGTTGACATCC
---TTGACAGG-
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AAGTTGACATCC
---YTGWCADY-
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

CREB1/MA0018.4/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGTTGACATCC---
--NATGACATCANNN
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAGTTGACATCC
---TTGACAG--
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAGTTGACATCC
---TTGACAGC-
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGTTGACATCC
--VBTGWCAGCB
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGTTGACATCC-
NGTAGGTTGGCATNNN
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTGACATCC----
AATNTTGATACCCTATN
A C G T C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGTTGACATCC
-GGTTGGCAT--
C G T A C G T A A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A G T C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T