Information for 12-GGCAGGCCAT (Motif 14)

A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.112e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif76.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets194.0 +/- 0.0bp
Average Position of motif in Background96.6 +/- 69.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528/MA1597.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCAGGCCAT---
CCCAGGGAAGCCATTTC
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCAGGCCAT
-CTAGGCCT-
A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCAGGCCAT
-CNAGGCCT-
A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGCAGGCCAT----
----GGCCATTAAC
A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGGCCAT--
NNGGCCACGCCTTTN
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCAGGCCAT
ATCACCCCAT
A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCAGGCCAT------
--CAGGCCNNGGCCNN
A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGCCAT
CNGTCACGCCAC
A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGCCAT
TBGCACGCAA-
A C G T A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCAGGCCAT
ATCACCCCAT
A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T