Information for 5-GCCTTTGATAGG (Motif 5)

A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T A G T C C G T A C G T A C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCCTTTGATAGG-
-CCTTTTATAGNC
A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCCTTTGATAGG
TCCTTTGATGT-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCCTTTGATAGG
-CCTTTGATST-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCCTTTGATAGG
-CCTTTGATGT-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCTTTGATAGG--
AATCCCTTTGATCTATC
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCTTTGATAGG--
ATTTCCTTTGATCTATA
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTTGATAGG-
TNCCTTTGATCTTN
A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCCTTTGATAGG
-CCTTTGAWGT-
A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTTGATAGG--
NNTTCCTTTGATCTANA
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTTGATAGG
NNNNNNCTTTTATAN-
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T