Information for 12-GGGCACTTTATT (Motif 12)

A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C T G A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets161.0 +/- 0.0bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGCACTTTATT
--GCACTTAA--
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGGCACTTTATT----
----NTTTTATTGCNN
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCACTTTATT
NGTGGGCAT------
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGCACTTTATT
AASCACTCAA--
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGGCACTTTATT
NNNNTTGGGCACNNCN--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCACTTTATT
-NSCACTYVAV-
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGCACTTTATT
--CCACTTGAA-
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGCACTTTATT
AAGCACTTAA--
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGCACTTTATT-
CCTTGCAATTTTTNN
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGCACTTTATT
-RSCACTYRAG-
A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T