Information for 1-GTCCTATCGT (Motif 1)

A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A A C G T C G T A A C T G A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.3/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCCTATCGT
-TCTTATCT-
A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T
A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCCTATCGT--
AGNGTTCTAATGANN
A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCCTATCGT-----
TGTTCCCATTGTGTACT
A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

GATA6/MA1104.2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCTATCGT-
TTATCTTATCTTT
A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T
G C A T G C A T G C T A A G C T A T G C G C A T G C A T C G T A G C A T G A T C G C A T G A C T G C A T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCCTATCGT--
---CCATTGTTC
A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCTATCGT-
-YCTTATCTBN
A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTATCGT
NNTCTTATCT-
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T
A C T G T C G A A C G T A G T C A G C T C G A T C G T A A C G T A G T C C G A T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCCTATCGT---
---CTATTGTTTT
A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTCCTATCGT
-YSTTATCT-
A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T
A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCCTATCGT-
TTCTTATCTTT
A C T G A C G T A G T C A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T