Information for 6-AGGCACTTGGAT (Motif 6)

C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGCACTTGGAT
-GTCACGTGGM-
C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGCACTTGGAT--
TAAGCCACTTGAATTT
A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

MYC/MA0147.3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGGCACTTGGAT
NNGCACGTGGNN
C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGCACTTGGAT
--CCACTTGAA-
C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGCACTTGGAT
-ACCACTTGAA-
C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGCACTTGGAT
MRSCACTYAA--
C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGCACTTGGAT--
TAAGCCACTTGAAATT
A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCACTTGGAT-
CACGGCAGTTGGTNN
A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGCACTTGGAT-
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGCACTTGGAT
NNCCACGTGG--
C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T