Information for 10-TAATTAGCTT (Motif 16)

A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T C G T A
p-value:1e-3
log p-value:-7.531e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif50.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background93.4 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0045.1_Hoxa1/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----TAATTAGCTT--
ACGGTAATTAGCTCAG
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0074.1_Hoxd1/Jaspar

Match Rank:2
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----TAATTAGCTT--
TAAACTAATTAGCTGTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGCTT
NTAATGAGCT-
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----TAATTAGCTT--
TAAACTAATTAGCTTTG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TAATTAGCTT
TAATTAGN--
A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------TAATTAGCTT-
NTTCGCTAATTAGCTNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

VSX2/MA0726.1/Jaspar

Match Rank:7
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGCTT
NTAATTAG---
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T A C G T

PH0052.1_Hoxa5/Jaspar

Match Rank:8
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------TAATTAGCTT
NTGAGCTAATTACCNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:9
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGCTT
CTAATTAGCN-
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G A T G C T A C G A C G T

EMX2/MA0886.1/Jaspar

Match Rank:10
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TAATTAGCTT
GCTAATTAGC--
A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
T C A G A T G C G A C T G T C A C G T A A C G T A C G T C G T A T C A G A T G C A C G T A C G T