Information for 24-CATCAAGAATTG (Motif 23)

A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATCAAGAATTG-
TTGACCGAGAATTCC
A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CATCAAGAATTG
TCACCCATCAATAAACA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CATCAAGAATTG-------
--GGAAAAATTGTTAGGAA
A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CATCAAGAATTG-------
-----AAAATTGTTATGAA
A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

ZNF136/MA1588.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CATCAAGAATTG
GTCAACCAAGAATTC
A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATCAAGAATTG----
-ATAAACAATTAAACA
A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATCAAGAATTG--
ATGGTTCAATAATTTTG
A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

EHF/MA0598.3/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATCAAGAATTG--
NNAACAGGAAGTGNN
A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T
T C A G C T G A C G T A T G C A T A G C T G C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C G A T A C G

ELF1/MA0473.3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATCAAGAATTG--
AAACAGGAAGTGGG
A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T
C T G A C T G A T G C A T A G C T G C A A T C G C T A G T G C A C G T A T C A G C G A T T C A G T C A G T A C G

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATCAAGAATTG
GTCATCAATCATT-
A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T A C G T