Information for 1-GAAATCAAACTG (Motif 2)

A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background192.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GAAATCAAACTG
AAGGCGAAATCATCGCA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAATCAAACTG
GGAAGTGAAAST-
A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAATCAAACTG
GAAAMTGAAACT-
A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAATCAAACTG
AGAAACGAAAGT-
A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAAATCAAACTG-
GGAAANTGAAACTNA
A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAATCAAACTG
CGGAAGTGAAAC--
A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAAATCAAACTG
---ATTAAA---
A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAATCAAACTG
GCAATAAAAC--
A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAAATCAAACTG
HDGYAATGAAAN--
A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAAATCAAACTG
HNRAATCAAT---
A C G T A C T G C G T A C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T