Information for 25-GCAGAGACTA (Motif 28)

A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.136e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background88.9 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAGAGACTA
GCAGTGATTT
A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGACTA
TGCTGTGATTT
A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCAGAGACTA
RHHCAGAGAGGB
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

GFI1/MA0038.2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAGACTA-
TGCAGTGATTTN
A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C G T
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

IRF6/MA1509.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAGAGACTA
ACCGAAACT-
A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCAGAGACTA
TAACAGCAGACT---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCAGAGACTA
--BCAGACWA
A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCAGAGACTA--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCAGAGACTA--
GNNACCGAGAATNNN
A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCAGAGACTA--
NNNACCGAGAGTNNN
A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T