Information for 2-TCGATTGT (Motif 37)

A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C G T A G T C A C T G C G T A
p-value:1e-2
log p-value:-6.198e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif65.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background103.0 +/- 86.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TCGATTGT-----
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TCGATTGT--
-CCATTGTTC
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TCGATTGT--
NNCCATTGTNN
A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TCGATTGT---
-CCATTGTTNY
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TCGATTGT--
NNCCATTGTNN
A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCGATTGT-----
-CCATTGTTYYBB
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCGATTGT---
-CCATTGTTYB
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCGATTGT-------
AATCAATTGTTCCGCTA
A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TCGATTGT-
---ATTGTT
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TCGATTGT--
---ATTGTTA
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T