Information for 8-CCAAGCAGAACT (Motif 9)

A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAGAACT
AACCAATCAGA---
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAGAACT
AGCCAATCAGA---
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAAGCAGAACT-
-AAAGRGGAAGTG
A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T A C G T
A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAAGCAGAACT--
TTAAGAGGAAGTTA
A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGCAGAACT
NNTGCCAAGNN-----
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAGAACT
AGCCAATCGG----
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGCAGAACT--
CCAAGCCCAACCAG
A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGCAGAACT
CCAATCAA----
A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCAAGCAGAACT
ACTAGCCAATCA-----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAAGCAGAACT-
GCAAAACATTACTA
A C G T A G T C A G T C C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A G T C A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A