Information for 5-CCATCCACATTA (Motif 4)

A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C T G A C G T A C T G A C T G C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCATCCACATTA
TCCAATCCACA---
A C G T A C G T A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCATCCACATTA
--ATCCAC----
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCATCCACATTA
SSAATCCACANN-
A C G T A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCATCCACATTA-
---NNCTCATTAT
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCATCCACATTA-----
GCAACCTCATTATNNNN
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCATCCACATTA-----
NNNACCTCATTATCNTN
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCATCCACATTA
NWAACCACADNN
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NKX6-3/MA1530.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCATCCACATTA--
-----CTCATTAAA
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCATCCACATTA--
----GCTAATTAGC
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCATCCACATTA
NAAACCACAG--
A G T C A G T C C G T A A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T