Information for 9-GGAGGTAAATGC (Motif 9)

A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAGGTAAATGC
-CAGGTAAGTAT
A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ZNF135/MA1587.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGTAAATGC
TCAGGAGGTCGAGG-
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAGGTAAATGC
GGAGGAGGTGAGAA-
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGAGGTAAATGC-
---GCTAAACGGT
A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAGGTAAATGC
----CTAAACGG
A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGTAAATGC-
AGGGAAGTCATTTCT
A C G T A C G T A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGAGGTAAATGC
----TTAAGTGC
A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGAGGTAAATGC----
-GGGGTCAATGACCTN
A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGTAAATGC
AGRGGTCA----
A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGTAAATGC
TGGCGGGAAAHB-
A C G T A C T G A C T G C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T