Information for 2-ACCCATCGGG (Motif 3)

C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACCCATCGGG---
-CHCAGCRGGRGG
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACCCATCGGG---
NNCCATCTGTNNN
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

TWIST1/MA1123.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACCCATCGGG---
NNACATCTGGNNN
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACCCATCGGG-
-NNCATCTGNN
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T
A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

NEUROD1/MA1109.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACCCATCGGG--
NNNCCATCTGTNN
A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCCATCGGG
AGCCAATCGG-
A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACCCATCGGG-----
DCHCAGCAGGRGGCC
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCCATCGGG---
CCACACAGCAGGAGA
A C G T A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCCATCGGG---
GCACCCCTGGGTGCC
A C G T A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACCCATCGGG-
-GCCATCTGTT
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G A C T G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T