Information for 19-GAGGCTTGCC (Motif 35)

A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A A C T G A G T C A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.110e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif37.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets161.0 +/- 0.0bp
Average Position of motif in Background117.1 +/- 90.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF682/MA1599.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GAGGCTTGCC---
NNAGGGGCTTGGCCNN
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGGCTTGCC--
-NNACTTGCCTT
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGGCTTGCC---
CAAAGGCGTGGCCAG
A C G T A C G T A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGGCTTGCC
-AAGCTTG--
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGCTTGCC
GGGGATTTCC
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGCTTGCC
-AGGCCTNG-
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGGCTTGCC
HAWGRGGCCM---
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGGCTTGCC--
GGGGATTCCCCC
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGCTTGCC
GGGAATTTCC
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGCTTGCC
GGGGATTTCC
A C T G C G T A A C T G A C T G A G T C A C G T A C G T A C T G A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C