Information for 8-GTCTAGTGGC (Motif 28)

A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A C G T C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.479e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background92.2 +/- 106.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTCTAGTGGC---
AANTTCAAGTGGCTTN
A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTCTAGTGGC
TGTCTAGA---
A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTCTAGTGGC---
AATTTCAAGTGGCTTN
A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTCTAGTGGC---
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCTAGTGGC
BTBRAGTGSN
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTCTAGTGGC
NTCAAGTGGN
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTCTAGTGGC
NTCAAGTGG-
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTCTAGTGGC---
AAATTCAAGTGGNTTN
A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Isl1/MA1608.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCTAGTGGC-
NNCTAATGGNN
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTCTAGTGGC--
NNGTCGCGTGNCAC
A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C