Information for 9-AGCAACACTGTC (Motif 11)

C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCAACACTGTC--
TWGHWACAWTGTWDC
A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCAACACTGTC--
YDGHTACAWTGTADC
A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

RFX7/MA1554.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCAACACTGTC
NTAGCAACG-----
A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCAACACTGTC
SCCTAGCAACAG----
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGCAACACTGTC
TNCCATAGCAACNN----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGCAACACTGTC
CCGCATAGCAACGGA---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCAACACTGTC-----
-CAATCACTGGCAGAAT
C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGCAACACTGTC
TACCATAGCAACGGT---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCAACACTGTC
---CTCATTGTC
C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGCAACACTGTC--
-------NTGTCAN
C G T A A C T G A G T C C G T A C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A