Information for 4-AGGGCAGCTACT (Motif 5)

C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGGGCAGCTACT
--AGCAGCTGCT
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGGCAGCTACT
SSRGCAGCTGCH
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGGCAGCTACT--
--AGCAGCTGCTNN
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGCTACT---
NNNNAGCAGCTGCTGAN
A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGGCAGCTACT-
-NNGCAGCTGCNN
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T A C G T
A C G T T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAGCTACT
TNNGGGCAG-----
A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGGCAGCTACT
--GGCAGCTGCC
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T
A C G T A C G T T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGGCAGCTACT
--CGCAGCTGCG
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGGCAGCTACT-
---NCAGCTGCTG
C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

ZNF528/MA1597.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAGCTACT--
CCCAGGGAAGCCATTTC
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C