Information for 3-CATGCACGTC (Motif 7)

A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CATGCACGTC-
-NNGCACGTNC
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CATGCACGTC-
---GCACGTAY
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CATGCACGTC-
---GCACGTNC
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATGCACGTC
--BGCACGTA
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CATGCACGTC---
---GCACGTACCC
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

SOHLH2/MA1560.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CATGCACGTC--
--NGCACGTGCG
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A G C T A C T G A G T C C T G A G T A C T A C G A G C T C T A G T G A C C T A G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CATGCACGTC-
-----ACGTCA
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CATGCACGTC
----CACGTG
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATGCACGTC-
---GCACGTGT
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATGCACGTC--
--NGCACGTGNT
A G T C C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T A C G T
A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T