Information for 6-GCGCAAAGAAGA (Motif 6)

A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGCAAAGAAGA
GCCGCGCAGTGCGT-
A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCGCAAAGAAGA
------NGAAGC
A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCGCAAAGAAGA
AAAACAAAGAA--
A C G T A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T

E2F4/MA0470.2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCAAAGAAGA
NAATGGCGCCAAAA---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A A C G T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGCAAAGAAGA---
GCACAYAGTAGGKCY
A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCGCAAAGAAGA
CCTTCGGCGCCAAAAGG-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCGCAAAGAAGA
--GTAAACAA--
A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCGCAAAGAAGA----
-AACAAACAACAAGAG
A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAAAGAAGA
GGAACAAAGR---
A C G T A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCGCAAAGAAGA
AGCTCGGCGCCAAAAGC-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A C T G C G T A
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T