Information for 11-CCTAGAAATGAA (Motif 11)

A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G
p-value:1e-4
log p-value:-9.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCTAGAAATGAA-
---GGYAATGAAA
A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T
A C G T A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCTAGAAATGAA---
---AGAAACGAAAGT
A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTAGAAATGAA--
--CGGAAGTGAAAC
A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTAGAAATGAA--
--HDGYAATGAAAN
A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTAGAAATGAA---
---GGAAGTGAAAST
A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGAAATGAA
TTTCCTGGAAAGNNN
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Stat5a/MA1624.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCTAGAAATGAA
TTTCCAAGAAAT---
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A
C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CCTAGAAATGAA
TGAATTCCTAGAAAGCA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T

Stat5b/MA1625.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCTAGAAATGAA
CATTTCCCAGAAATC--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CCTAGAAATGAA
NNNATTCCTCGAAAGN--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A C G T A C T G C G T A C G T A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T