Information for 15-GGTTTATTCAGG (Motif 20)

A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTTTATTCAGG
-GHATATKCAT-
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTTTATTCAGG
GTTTTATTGGG-
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTTTATTCAGG
TGTTTAYTTAGC
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTTTATTCAGG
TATTGTTTATT----
A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T

FOXE1/MA1487.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTATTCAGG-
NTTGTTTATTTAAGG
A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T
C T G A G C A T A G C T A C T G A C G T A C G T A C G T C T G A A G C T G C A T A G C T C G T A T C G A A C T G T A C G

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTTTATTCAGG-----
---ACATTCATGACACG
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTTTATTCAGG
-GAATATTCAT-
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTTATTCAGG
GTTTTATTGGN-
A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTATTCAGG---
NSTGTTTRCWCAGBNNN
A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTATTCAGG
NGGGATTA------
A C G T A C G T A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T