Information for 17-CTCTCAAACT (Motif 31)

A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G
p-value:1e-2
log p-value:-6.850e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets147.0 +/- 0.0bp
Average Position of motif in Background100.8 +/- 79.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTCTCAAACT
AGCCACTCAAG--
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCTCAAACT
ACCACTCAAAA-
A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTCTCAAACT
AASCACTCAA---
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAAACT
TAACCACTCAAGAA
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCAAACT
NSCACTYVAV--
A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCAAACT
GCTGTCAA---
A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CTCTCAAACT-
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCTCAAACT
RSCACTYRAG--
A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CTCTCAAACT
AAAGACCTGTCAATCC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CTCTCAAACT
AAGCACCTGTCAATAT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A G T C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T