Information for 8-TGGCTGGCTCCA (Motif 9)

A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C T G A G T C A G T C C G T A
p-value:1e-3
log p-value:-8.670e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background54.8 +/- 77.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGCTGGCTCCA---
--NNTGGCCCCAGNN
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGCTCCA
CTGTCTGTCACCT
A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZBTB6/MA1581.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGGCTGGCTCCA----
---NNGGCTCAAGGNN
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGGCTGGCTCCA-----
-----GGCTCYAKCAYC
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGCTGGCTCCA
TGTCTGDCACCT
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGCTCCA
TWGTCTGV-----
A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCTGGCTCCA
TGGTACATTCCA
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGCTCCA-
CTGGCAGNCTGCCA
A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGGCTGGCTCCA
------GCTCCG
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZFP42/MA1651.1/Jaspar

Match Rank:10
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------TGGCTGGCTCCA
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C C G T A
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G