Information for 1-GCTCAGGGATTT (Motif 2)

A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G T C A G T C A G T C A C G T A C T G C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB6/MA1581.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTCAGGGATTT
NNGGCTCAAGGNN--
A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTCAGGGATTT
--GCAGTGATTT
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCTCAGGGATTT
----NGGGATTA
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTCAGGGATTT
-TGCTGTGATTT
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

GFI1/MA0038.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTCAGGGATTT-
-TGCAGTGATTTN
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCTCAGGGATTT--
----VRGGATTARN
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX2/MA1547.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCTCAGGGATTT-
-----GGGATTAN
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTCAGGGATTT---
---AAGGGATTAGAA
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCTCAGGGATTT--
-----GGGATTANN
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTCAGGGATTT------
-TGTAGGGATTAATTGTC
A C T G A G T C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C