Information for 20-CCAGACAGACTT (Motif 18)

A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCAGACAGACTT
CCAGACAG----
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCAGACAGACTT
CCAGACRSVB--
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CCAGACAGACTT
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCAGACAGACTT
TCTAGACA-----
A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCAGACAGACTT
ATGCCAGACN-----
A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGACAGACTT
BCAGACWA----
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAGACAGACTT
RHHCAGAGAGGB--
A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGACAGACTT
AGGTGNCAGACAG----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAGACAGACTT
TACTCCAGAAAAGAT-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCAGACAGACTT
AGGTGHCAGACA-----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T