| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 189.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nr2e3/MA0164.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TAAGCTTGGTCA -AAGCTTG---- |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAAGCTTGGTCA- TATAAGTAGGTCAA |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA---- -AAWCTAGGTCARDNN |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA --AAYTAGGTCA |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA --AAYTAGGTCA |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA- -WAABTAGGTCAV |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA ATAAGTAGGTCA |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA- --AATTAGGTCAC |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA --ATCAAGGTCA |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 6 |
| Orientation: | forward strand |
| Alignment: | TAAGCTTGGTCA ------AGGTCA |
|
|
|