Homer de novo Motif Results (motif_results/SRR11563612_amplicon1_ecDNA_9//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1
Total background sequences = 112000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A C T G A G T C A C T G C G T A A C T G A C T G A C G T C G T A A G T C C G T A 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.635)
More Information | Similar Motifs Found
motif file (matrix)
2 * A G T C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.668)
More Information | Similar Motifs Found
motif file (matrix)
3 * A G T C A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)ZSCAN4/MA1155.1/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C G T A G T C C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C T G A C T G C G T A 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer(0.654)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A G T C A G T C A G T C A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C G T 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer(0.615)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T A C T G C G T A A G T C A G T C A G T C A G T C C G T A A G T C A C G T A G T C C G T A 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PB0157.1_Rara_2/Jaspar(0.801)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T A C T G A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C C G T A C G T A 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)PB0201.1_Zfp281_2/Jaspar(0.789)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C T G 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)IKZF1/MA1508.1/Jaspar(0.807)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G T C A C T G A C G T A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T C G T A 1e-4-1.144e+01100.00%0.00%0.0bp (0.0bp)NRL/MA0842.2/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A G T C A C T G A G T C A G T C A C T G C G T A A G T C A C T G A C T G A G T C A C G T 1e-4-1.034e+01100.00%0.00%0.0bp (72.3bp)PB0190.1_Tcfap2b_2/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
11 * A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C 1e-4-9.833e+00100.00%0.01%0.0bp (57.6bp)PB0076.1_Sp4_1/Jaspar(0.627)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A C T G A G T C A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T 1e-4-9.833e+00100.00%0.01%0.0bp (41.5bp)EGR2/MA0472.2/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A C T G A C T G A G T C A C T G A C T G A G T C A G T C A G T C A G T C A C T G A G T C 1e-3-8.147e+00100.00%0.03%0.0bp (75.8bp)PB0052.1_Plagl1_1/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A 1e-3-8.111e+00100.00%0.03%0.0bp (62.5bp)ZNF341/MA1655.1/Jaspar(0.659)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A C T G A C G T 1e-3-7.832e+00100.00%0.04%0.0bp (73.5bp)VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer(0.595)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C A G T C A G T C A C T G A G T C A G T C A C T G A C G T A G T C C G T A 1e-3-7.531e+00100.00%0.05%0.0bp (77.5bp)E2F6/MA0471.2/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A G T C A G T C A G T C A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T 1e-3-7.238e+00100.00%0.07%0.0bp (74.6bp)MAZ/MA1522.1/Jaspar(0.681)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A G T C A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A 1e-3-7.209e+00100.00%0.07%0.0bp (68.1bp)Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer(0.665)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C G T C G T A A G T C C G T A A C G T A C T G A C G T 1e-3-7.112e+00100.00%0.08%0.0bp (76.9bp)PH0083.1_Irx3_1/Jaspar(0.855)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G T A 1e-2-5.753e+00100.00%0.32%0.0bp (69.5bp)GFX(?)/Promoter/Homer(0.739)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C T G 1e-2-5.732e+00100.00%0.32%0.0bp (69.9bp)POL013.1_MED-1/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)