Information for 3-CACAGTTGTC (Motif 10)

A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background108.4 +/- 78.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0047.1_Myf6_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CACAGTTGTC--
GAAGAACAGGTGTCCG
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

MYB/MA0100.3/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CACAGTTGTC
NNCAGTTGNN
A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CACAGTTGTC-
NNACAGGTGTNN
A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CACAGTTGTC
AACAGCTGTC
A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C
T C G A T C G A A G T C C G T A A C T G G T A C A C G T A C T G G A C T A G T C

MYF5/MA1641.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CACAGTTGTC-
GAACAGCTGTTC
A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACAGTTGTC-
NNACAGCTGTNN
A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T
T C A G T G A C T C G A G T A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

MYF6/MA0667.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACAGTTGTC
AACAGCTGTT
A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T

Rbpjl/MA1621.1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CACAGTTGTC--
NNNACAGGTGTNNN
A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CACAGTTGTC-
-ACAGCTGTTV
A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T
A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Ptf1a/MA1618.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CACAGTTGTC--
AAACAGATGTTTA
A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A