Information for 16-GGCCCTTTAT (Motif 32)

A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.236e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background111.4 +/- 177.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCTTTAT--
NNGCACCTTTCTCC
A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCTTTAT--
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCTTTAT--
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCCCTTTAT----
--CCTTTTATAGNC
A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCCCTTTAT-
-ANCGTTTANN
A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTTTAT
AGGVNCCTTTGT
A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGCCCTTTAT---
---CCTTTGTTTT
A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

NR4A1/MA1112.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCTTTAT
NNTGACCTTTNN
A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCCCTTTAT---
--NNCTTTGTTNN
A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCCTTTAT-
---CCWTTGTY
A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T