Information for 5-TCTTCAACACAA (Motif 6)

A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C T G C G T A C G T A A C T G C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTTCAACACAA--
ATTTGCATAACAAAG
A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTTCAACACAA----
ATATCAAAACAAAACA
A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTTCAACACAA------
---CTCACACAATGGCGC
A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTTCAACACAA----
----BMRVACAAWGGV
A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

Stat6/MA0520.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTTCAACACAA--
CATTTCCTGAGAAAT
A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCTTCAACACAA-
NNGATCTAGAACCTNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTTCAACACAA---
AAAGTAAACAAAAATT
A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCTTCAACACAA---
-----RNAACAATGG
A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SOX15/MA1152.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCTTCAACACAA---
-----AAAACAATAG
A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTTCAACACAA
GCTTCC------
A C G T A G T C A C G T A C G T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T