Information for 21-GTCTTTCAAC (Motif 32)

A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A C G T A C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-6.946e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif72.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background79.5 +/- 122.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTCAAC-
TGTCTGDCACCT
A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCTTTCAAC---
-SCTGTCARCACC
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCTTTCAAC-
CTGTCTGTCACCT
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTTCAAC---
TNCCTTTGATCTTN
A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTCTTTCAAC-
-CCTTTGATST
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

TCF7/MA0769.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCTTTCAAC-
TCCTTTGATGT
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCTTTCAAC
-GCTGTCAA-
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTCTTTCAAC---
---TTGCAACATN
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTCTTTCAAC-
-CCTTTGATGT
A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCTTTCAAC
NCTGTCAATCAN-
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T