Information for 2-CTGGAAGCAGCA (Motif 4)

A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGGAAGCAGCA---
ADGGYAGYAGCATCT
A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGGAAGCAGCA-
-AGGAAACAGCTG
A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGGAAGCAGCA
--NGAAGC----
A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGGAAGCAGCA
GCCCGGAAGTGGC-
A C G T A C G T A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
T C A G T A G C T A G C T G A C T A C G A T C G T C G A G T C A T A C G A G C T T A C G T A C G T A G C A C G T

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGAAGCAGCA
NCCGGAAGTGG--
A C G T A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGAAGCAGCA
ACCGGAAG-----
A C G T A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGGAAGCAGCA
-NAGAAACAGNN
A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGAAGCAGCA
ACCGGAAGTG---
A C G T A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
C T G A T A G C T G A C T C A G C T A G G T C A C G T A T C A G A G C T T C A G A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGGAAGCAGCA
NACCGGAAGT----
A C G T A C G T A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGGAAGCAGCA
AACCGGAAGT----
A C G T A C G T A G T C A C G T A C T G A C T G C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T