Information for 12-CAAATGGATTGG (Motif 11)

A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAATGGATTGG
NNCTAATGGNN---
A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAAATGGATTGG
-TAATTGATTA-
A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAAATGGATTGG
NNACATATGGCN---
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAAATGGATTGG-
---ATTGATTYND
A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PAX3/MA0780.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAATGGATTGG
-TAATCGATTA-
A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A A C G T

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAATGGATTGG
-AAGAGGATTAG
A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAATGGATTGG
GGAACAGATGGCA---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAAATGGATTGG--
---NCTGATTGGNN
A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAAATGGATTGG
ACATATGG-----
A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAATGGATTGG--
--AAGGGATTAGAA
A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A