Information for 1-GGCCCTCTGAAT (Motif 1)

A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCTCTGAAT
GCGCCCCCTGNN-
A C G T A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCCTCTGAAT
TGGGCCCCCT----
A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCCTCTGAAT
VCCTCTCTGDDY
A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCTCTGAAT--
CCNNACCATCTGGCCTN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NEUROD1/MA1109.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCTCTGAAT
NNNCCATCTGTNN
A C G T A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCCCTCTGAAT-
NNCCATCTGTNNN
A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCCCTCTGAAT
KGGCCYCWTD--
A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCCCTCTGAAT
-NNCATCTGNN-
A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCCCTCTGAAT
-GCCATCTGTT-
A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCCCTCTGAAT-
---CCTTTGAWGT
A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T