Information for 11-GACCCAATAAAG (Motif 11)

A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C T G A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.2/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GACCCAATAAAG-
--CCCAATAAAAC
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GACCCAATAAAG----
AACCCAATAAAATTCG
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GACCCAATAAAG----
CGACCCAATCAACGGTG
A C G T A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GACCCAATAAAG
--CCYMATAAAA
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXB13/MA0901.2/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GACCCAATAAAG---
-AACCAATAAAATTT
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

HOXD13/MA0909.2/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GACCCAATAAAG-
--CCCAATAAAAC
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

CDX2/MA0465.2/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACCCAATAAAG-
-AAGCAATAAAAA
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GACCCAATAAAG
--NCYAATAAAA
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G
A C G T A C G T C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GACCCAATAAAG----
CTACCAATAAAATTCT
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GACCCAATAAAG-
---CYHATAAAAN
A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C