Information for 12-TAGGATAGATTT (Motif 10)

A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T A G T C A G T C A C G T C G T A
p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGGATAGATTT--
----ATTGATTYND
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGGATAGATTT---
-ATTATCGATTTTTT
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TAGGATAGATTT
CTACTAGGATGTNNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGGATAGATTT-
-ATGATKGATGRC
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGGATAGATTT---
-NTTATTGATTTTTT
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGGATAGATTT---
NNTTTATTGATTTTTT
A C G T A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAGGATAGATTT
--NTATCGATTA
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGGATAGATTT
NTTGATACATT-
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGGATAGATTT
--NTATYGATCH
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TAGGATAGATTT
--GCAGTGATTT
A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T