| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 118.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ACTGCCCCACTT- -BTGACCTAVTTW |
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|
RORC/MA1151.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ACTGCCCCACTT-- --TGACCTANTTAN |
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|
Wt1/MA1627.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACTGCCCCACTT CCCCTCCCCCACAC |
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|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACTGCCCCACTT- NNHYTGACCTAGWTT |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ACTGCCCCACTT --TGACCTARTT |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ACTGCCCCACTT --TGACCTARTT |
|
|
|
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ACTGCCCCACTT MCTCCCMCRCAB |
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|
|
NKX2-3/MA0672.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | ACTGCCCCACTT--- -----ACCACTTGAA |
|
|
|
Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | ACTGCCCCACTT-- -----ACCACTTAA |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ACTGCCCCACTT--- -TTGACCTANTTATN |
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