Information for 7-TGGCCTCCATAG (Motif 7)

A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGCCTCCATAG
-CGCCGCCATNN
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
A C G T A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

RORC/MA1151.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCCATAG
TGACCTANTTAN
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORB/MA1150.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTCCATAG
NTGACCTAATT--
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCCATAG
TGACCTTGAT--
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTCCATAG
NNHYTGACCTAGWTT-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T A C G T

ZNF528/MA1597.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTCCATAG-
GAAATGGCTTCCCTGGG
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T
C T A G T C G A T C G A C T G A A G C T C A T G T C A G G A T C G A C T A C G T A G T C G A T C G A T C G A C T A C T G T C A G C T A G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCCATAG
KGGCCYCWTD--
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCCATAG
TGACCTARTT--
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCCATAG
TGACCTARTT--
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCCATAG
TGACCTYA----
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T