Information for 12-ATACATCAACAT (Motif 11)

C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background133.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATACATCAACAT---
TCACCCATCAATAAACA
A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATACATCAACAT
GTCATAAATCATT--
A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATACATCAACAT
-TATGTAAATAT
C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATACATCAACAT--
CAAACAACAACACCT
A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATACATCAACAT
YCATCMATCA----
A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATACATCAACAT-
-TAAGTAAACAAA
C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C G T
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATACATCAACAT
NNCCATAAATCATNN-
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATACATCAACAT
GYCATCMATCAT---
A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATACATCAACAT
--AAATAAACA-
C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATACATCAACAT
NCYATMAATCAY---
A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A G T C C G T A A C G T
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T A C G T A C G T A C G T