Information for 6-GAATAAACCCTA (Motif 8)

A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAATAAACCCTA
-AATAAACAATN
A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAATAAACCCTA--
GANNATTAATCCCTNNN
A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

HOXD13/MA0909.2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAATAAACCCTA
CCCAATAAAAC---
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAATAAACCCTA
---TAATCCCN-
A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAATAAACCCTA--
GNNNATTAATCCCTNCN
A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAATAAACCCTA--
NNNAATTAATCCCCNCN
A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAATAAACCCTA
CCCAATAAAAC---
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C A C G T A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAATAAACCCTA
--ATAATCCC--
A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAATAAACCCTA
-CTTAATCCC--
A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

CDX4/MA1473.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAATAAACCCTA
GGCAATAAAAC---
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C G T C G T A
C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C A C G T A C G T A C G T