Information for 2-ACTTGGCTGGGA (Motif 3)

G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A C T A G A C G T
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.8 +/- 27.2bp
Average Position of motif in Background105.1 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACTTGGCTGGGA
GGGGCTYGKCTGGGA
A C G T A C G T A C G T G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACTTGGCTGGGA
--TWGTCTGV--
G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGGCTGGGA
NNACTTGCCTT---
A C G T A C G T G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTTGGCTGGGA
TACTTGGCAGA--
A C G T G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCTGGGA-
-TTTGGCGGGAAA
G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A A C G T
A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCTGGGA
-NTTGGCANN--
G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTTGGCTGGGA--
TTTTGGCGGGAAAA
G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACTTGGCTGGGA-
---WDNCTGGGCA
G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A A C G T
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTTGGCTGGGA----
GTATTGGGTGGGTAATT
A C G T G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTTGGCTGGGA-
-BTKGGCGGGAAA
G T C A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G C T A G C T A G C G T A A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A