Information for 16-CCCTATAGAC (Motif 26)

G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C T G A C G A T C G T A C T A G A C T G C A T G
p-value:1e-4
log p-value:-9.869e+00
Information Content per bp:1.853
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif117.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets89.6 +/- 42.5bp
Average Position of motif in Background100.5 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CCCTATAGAC-
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZSCAN29/MA1602.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCTATAGAC-
NCNGTGTAGACG
A C G T G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTATAGAC
CCYMATAAAA
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTATAGAC-
-CGTCTAGACA
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCCTATAGAC--
CCTTTTATAGNC
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

HOXD13/MA0909.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCTATAGAC-
CCCAATAAAAC
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCTATAGAC--
GTCCTTGAGCCCG
A C G T G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCCTATAGAC-
---TCTAGACA
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCTATAGAC-
CCCAATAAAAC
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

SMAD5/MA1557.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCTATAGAC-
-TGTCTAGACA
G T A C G T A C A G T C A C G T C G T A A G C T C G T A T C A G G T C A A G T C A C G T
A C G T G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A