Information for 3-GAGCAGTTCCAC (Motif 5)

A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A C G T A A G T C A C G T A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF140/MA1589.1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAGTTCCAC-----
GACCCAGCAATTCCACTCCTA
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A G T C G A T C G A T C C G T A C T A G A G T C G C T A T C G A A G C T G C A T G T A C G A T C T C G A G A T C A G C T G A T C G T A C G A C T C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGCAGTTCCAC
-TKCTGTTCCA-
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGCAGTTCCAC
CGGCTGTTCC--
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGCAGTTCCAC---
---CACTTCCYCTTT
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGCAGTTCCAC-
---CACTTCCTCT
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGCAGTTCCAC----
--NNACTTCCTCTTNN
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

ZNF341/MA1655.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAGTTCCAC
NNGGCTGTTCCN-
A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAGCAGTTCCAC
------ATCCAC
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

ZBTB12/MA1649.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGCAGTTCCAC--
---NNGTTCCAGNN
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGCAGTTCCAC---------
-TGCAGTTCCNNNNNTGGCCA
A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A