Information for 1-GTCAGACGCC (Motif 11)

A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-9.497e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets141.5 +/- 19.5bp
Average Position of motif in Background92.1 +/- 79.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTCAGACGCC-
-CCAGACRSVB
A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCAGACGCC
AGGTGHCAGACA--
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTCAGACGCC
-CCAGACAG-
A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

OSR2/MA1646.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCAGACGCC-
AAACAGAAGCAG
A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCAGACGCC------
AAGCATACGCCCAACTT
A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PROX1/MA0794.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCAGACGCC---
-CAAGACGCCTTA
A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCAGACGCC
ACCAGATGGC
A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCAGACGCC
GTCACATGAY
A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCAGACGCC-
AGGGGTCAGAGGTCA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCAGACGCC---
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A