Information for 4-GTCGGTCTTA (Motif 12)

A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T G T C A C G T A A C T G C G T A G T A C A G T C A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.8 +/- 45.4bp
Average Position of motif in Background70.9 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCGGTCTTA-
NNGGTTGGGCTTNN
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGGTCTTA--
NNANTGGTGGTCTTNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTCGGTCTTA
--NGGGATTA
A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTCGGTCTTA--
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTCGGTCTTA
GCTCGGSCTC-
A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTCGGTCTTA-----
TNNNNGGTGTCATNTNT
A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

HOXD10/MA1506.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTCGGTCTTA----
---GGTCGTAAAAC
A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GTCGGTCTTA--
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTCGGTCTTA-----
AAGACGCTGTAAAGCGA
A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTCGGTCTTA-----
AAGACGCTGTAAAGCGA
A C G T A C G T A C T G A C G T A G T C A C T G A C T G C G A T A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A