Information for 4-CTCGTATTGTCC (Motif 6)

A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CTCGTATTGTCC-
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTCGTATTGTCC-----
CNNNTATTGTTCNNNNN
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCGTATTGTCC
--CTCATTGTC-
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCGTATTGTCC-----
AATCAATTGTTCCGCTA
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

SOX8/MA0868.2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTCGTATTGTCC-
---CCATTGTTCT
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCGTATTGTCC----
NNTTTATTGTTCTNNN
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCGTATTGTCC-
---CTATTGTTTT
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCGTATTGTCC--
--BCCWTTGTBYKV
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCGTATTGTCC---
---CCATTGTTYYBB
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCGTATTGTCC-
---CCATTGTTNY
A G T C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T