Information for 8-YGGCTCTGTGTC (Motif 13)

A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A G T A C C G T A A C T G C G T A A T C G G T A C A G T C T C A G
p-value:1e-6
log p-value:-1.525e+01
Information Content per bp:1.831
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif111.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets82.9 +/- 47.1bp
Average Position of motif in Background104.7 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:YGGCTCTGTGTC--
---GTCTGTTTCTA
A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:YGGCTCTGTGTC--
-------NTGTCAN
A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--YGGCTCTGTGTC---
GTTGGCACGGTGCCAGG
A C G T A C G T A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A T C G G C A T A C G T A C T G A C T G G T A C C T G A A G T C A T C G C A T G G A C T A C T G A G T C A G T C G T C A C T A G A T C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---YGGCTCTGTGTC-
GTAGGTCACTGGGTCA
A C G T A C G T A C G T A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YGGCTCTGTGTC-
-GGGGGTGTGTCC
A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YGGCTCTGTGTC--
CTTGGCANNNTGCCAA
A C G T A C G T A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YGGCTCTGTGTC--
---NNCTTTGTTNN
A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YGGCTCTGTGTC
AGGVNCCTTTGT-
A C G T A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YGGCTCTGTGTC-
TTGGCATGGTGCCA
A C G T A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIB/MA1643.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----YGGCTCTGTGTC-----
TGCCTGGCATTGTGCCAAGCA
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A T G C C G A T G T A C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A T C C A G T A C T G C A T G T G A C G C T A A G C T C A G T T C A G C G A T A C T G A T G C A G T C G T C A C T G A T C A G G A C T G C T A