Information for 14-GAGTGCTGTCCA (Motif 19)

A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C T G A A T G C C G T A A C T G A G T C C T G A A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.0 +/- 29.1bp
Average Position of motif in Background80.8 +/- 42.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGCTGTCCA
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTGTCCA
TTAAGTGCTT----
A C G T A C G T A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAGTGCTGTCCA
----GCTGTCAA
A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGTGCTGTCCA
TTRAGTGSYK----
A C G T A C G T A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTGTCCA
TTGAGTGSTT----
A C G T A C G T A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTGTCCA
CTYRAGTGSY-----
A C G T A C G T A C G T A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGTGCTGTCCA
----GCTGTG--
A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGTGCTGTCCA----------
-GGCGCTGTCCATGGTGCTGAA
A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGTGCTGTCCA---------
-GGAGCTGTCCATGGTGCTGA
A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTGTCCA
CTTGAGTGGCT----
A C G T A C G T A C G T A C T G C G T A A C T G A G C T C T A G A G T C A C G T A T C G A G C T A G T C A G T C C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T