Information for 1-GAGGAGAAATTC (Motif 1)

A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGGAGAAATTC
-NAGAGAAAGNA
A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGAAATTC
GAAAGTGAAAGT-
A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGGAGAAATTC--
----GGAAATTCCC
A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAAATTC
GGAAGTGAAAST-
A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAGGAGAAATTC--
----GGAAATTCCC
A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF140/MA1589.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGGAGAAATTC------
TAGGAGTGGAATTGCTGGGTC
A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A C A T G C T A G T C G A C T A G A G C T C T A G C A T G C G T A T C G A A G C T C G A T T C A G G A T C G C A T C T A G C T A G C T A G A G C T G A T C

ZNF263/MA0528.2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GAGGAGAAATTC
GGGGGGAGGAGG-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGAAATTC
CGGAAGTGAAAC--
A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAAATTC
GGAGGGGGAA---
A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGAAATTC-
ARGAGGMCAAAATGW
A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A G T C A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T