Information for 1-TCCAGCTCACCG (Motif 1)

A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G C T A G A C G T A C T G G T C A A C T G A G T C C G A T A C T G A C T G C G T A
p-value:1e-17
log p-value:-3.970e+01
Information Content per bp:1.949
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.7 +/- 26.8bp
Average Position of motif in Background119.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRA/MA0592.3/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCCAGCTCACCG
GCTCAAGGTCACA-
A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCAGCTCACCG
ATCAAGGTCA---
A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCAGCTCACCG
TCAAGGTCAN--
A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCCAGCTCACCG
TCAAGGTCATA-
A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCCAGCTCACCG-----
TTTCGAGCGGAACGGTCGC
A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCAGCTCACCG
--AAGGTCAC--
A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCCAGCTCACCG
GTGCCACGTCATCA
A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCCAGCTCACCG
-HCAGCTGDTN-
A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

CREB3L4/MA1474.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCCAGCTCACCG
TGCCACGTCACC-
A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
A G C T C A T G G T A C G T A C T C G A A G T C T C A G A G C T T A G C T C G A A G T C A T G C A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCCAGCTCACCG
NNAGTCCCACTCNNNN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C C G T A A G T C A G T C C T A G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A