Information for 10-AAGCRHTGGA (Motif 17)

G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C G T A C C G T A C T A G G A C T C T A G A G T C A G C T A C G T
p-value:1e-6
log p-value:-1.493e+01
Information Content per bp:1.756
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif11.23%
Number of Background Sequences with motif1978.0
Percentage of Background Sequences with motif4.02%
Average Position of motif in Targets102.2 +/- 49.5bp
Average Position of motif in Background99.4 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGCRHTGGA-
-GGYAATGAAA
G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T
A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

ZNF684/MA1600.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGCRHTGGA------
TAAAGGGGTGGACTGTAT
A C G T A C G T G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T G A C G T A C T A G C T A G A C T G T A C G G C A T C T A G A T C G T G C A T A G C G C A T C T A G A G C T T C G A G A C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAGCRHTGGA---
TTTTAAGTACTTAAATT
A C G T A C G T A C G T A C G T G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGCRHTGGA--
HDGYAATGAAAN
G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAGCRHTGGA--
CNTTAAGTACTTAANG
A C G T A C G T A C G T A C G T G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAGCRHTGGA-
-----GTGGAT
G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGCRHTGGA-----
ATAACCACTTGAAAATT
A C G T A C G T G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGCRHTGGA----
----AATGGAAAAT
G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCRHTGGA-----
AATCGCACTGCATTCCG
A C G T A C G T G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AAGCRHTGGA---
------TGGAAAA
G T C A C T G A A C T G G A T C C T G A G A T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A