Information for 17-TGTGACTARGTR (Motif 23)

C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets78.9 +/- 41.5bp
Average Position of motif in Background84.9 +/- 70.9bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTGACTARGTR-
ACCGTGACTAATTNN
A C G T A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTGACTARGTR--
-NTGATTAAATTAN
C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G A C G T A C G T
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTGACTARGTR-
NNNGTAACTANGNNA
A C G T A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTGACTARGTR
AGGTGTGA-------
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGACTARGTR
AAGGTGTGAAAAT---
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTGACTARGTR
AGGTGTGA-------
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTGACTARGTR
CTGTTGCTAGGS-
A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTGACTARGTR------
-NTNNTTAAGTGGTTANN
C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGTGACTARGTR--
-----TTAAGTGGT
C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTGACTARGTR
RTCATGTGAC------
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C G T A G T A C A C G T C G T A C T A G A C T G A C G T C T A G
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T