Information for 10-CATGTAACAA (Motif 21)

A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A
Reverse Opposite:
A G C T C G A T C T A G A G C T C G A T T G C A A G T C G C T A A G C T T C A G
p-value:1e-5
log p-value:-1.341e+01
Information Content per bp:1.674
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif3327.2
Percentage of Background Sequences with motif6.82%
Average Position of motif in Targets102.7 +/- 54.8bp
Average Position of motif in Background99.6 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CATGTAACAA-
AATGTATCAAT
A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CATGTAACAA--
AATGTATCAATT
A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T A C G T
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

DMRTA2/MA1478.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CATGTAACAA--
AATGTAACAATT
A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T A C G T
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CATGTAACAA-
AATATACATGTAAAACA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATGTAACAA----
AAAAATAACAAACGG
A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CATGTAACAA-
AAAATACATGTAATACT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CATGTAACAA-
AATATACATGTAATATA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CATGTAACAA-
TAAATACATGTAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CATGTAACAA-
AAAATACATGTAAAAAT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CATGTAACAA-
AATATACATGTAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A C G A T T C A G A C G T C G T A T C G A G A T C G C T A T C G A A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T