| p-value: | 1e-4 |
| log p-value: | -9.833e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 5.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 146.0 +/- 0.0bp |
| Average Position of motif in Background | 107.3 +/- 70.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTGTAAGAC---- NNNATTTTACGACNNTN |
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HOXC9/MA0485.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATTGTAAGAC NTTTTACGAC |
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HOXD10/MA1506.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATTGTAAGAC- NTTTTACGACC |
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HOXB9/MA1503.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATTGTAAGAC NTTTTACGAC |
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|
|
PB0174.1_Sox30_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATTGTAAGAC-- TAAGATTATAATACGG |
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|
|
PH0076.1_Hoxd11/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTGTAAGAC---- ANNATTTTACGACNTNA |
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|
|
SOX2/MA0143.4/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATTGTAAGAC NNCCATTGTNN--- |
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|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTGTAAGAC- AGGTGHCAGACA |
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|
|
PB0187.1_Tcf7_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTGTAAGAC-- NNNTTTNTAATACNG |
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|
Sox5/MA0087.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATTGTAAGAC ATTGTTA--- |
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