Information for 14-CAGCCTGGCTGA (Motif 12)

A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.552e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets181.0 +/- 0.0bp
Average Position of motif in Background69.1 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGCCTGGCTGA
GTCATGCHTGRCTGS
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGCCTGGCTGA--
--VCCTCTCTGDDY
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGCCTGGCTGA
----TWGTCTGV
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAGCCTGGCTGA
------NGCTN-
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTGGCTGA
DCTCAGCAGG-----
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGCCTGGCTGA
NGTCACGCTTGGCTGC
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ZFP42/MA1651.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGCCTGGCTGA-----
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAGCCTGGCTGA----
------TGCTGACTCA
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCCTGGCTGA
CTGTCTGG----
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCCTGGCTGA
CAAGATGGCGGC
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C