Information for 3-CTCCACAG (Motif 25)

A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G
Reverse Opposite:
A G T C G A C T A C T G A G C T C T A G A C T G C T G A A C T G
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.876
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif11.17%
Number of Background Sequences with motif2888.6
Percentage of Background Sequences with motif5.93%
Average Position of motif in Targets105.3 +/- 50.6bp
Average Position of motif in Background100.1 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTCCACAG
ATCCAC--
A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTCCACAG-
---CACAGN
A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCCACAG--
NWAACCACADNN
A C G T A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAG-
AAACCACAGC
A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAG--
AAACCACAGAN
A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZBTB26/MA1579.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCCACAG-----
TACTCCAGAAAAGAT
A C G T A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCCACAG-
SSAATCCACANN
A C G T A C G T A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTCCACAG
TCCAATCCACA-
A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

SCRT1/MA0743.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCACAG------
AATTCAACAGGTGGTT
A C G T A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

ZSCAN29/MA1602.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCCACAG-
CGTCTACACGGG
A C G T A C G T A C G T A G T C A G C T A G T C A G T C C T G A G T A C C T G A A C T G A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G