Information for 8-GGTCACTCAT (Motif 15)

A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background78.1 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----GGTCACTCAT-
NNGCTGTCACTCANN
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCACTCAT--
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACTCAT
NNGGTCACGCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

FOS/MA0476.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTCACTCAT-
TGTGACTCATT
A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTCACTCAT--
ATGATGACTCATAA
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
C T G A G A C T C A T G T C G A G C A T C A T G C G T A A T G C C G A T G T A C G C T A A G C T G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTCACTCAT
NCTGTCAATCAN
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTCACTCAT
GTACACTCAC
A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

PB0142.1_Jundm2_2/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACTCAT----
NNGGTGACTCATCANN
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T

FOS::JUND/MA1141.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGTCACTCAT--
NNATGACTCATNN
A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A G T C A C T G T C G A A C G T A C T G C G T A A G T C C A G T G T A C C T G A A G C T G T A C T G A C

FOS::JUN/MA0099.3/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGTCACTCAT
NATGACTCAT
A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T
A C T G T C G A C G A T C A T G C G T A A T G C C A G T G T A C C T G A A G C T