Information for 8-TTCATAACAGTG (Motif 10)

A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C T G C G T A C G T A
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets161.0 +/- 0.0bp
Average Position of motif in Background192.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTCATAACAGTG--
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAACAGTG-
NTTNAGAACAATTA
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCATAACAGTG-
ATGTCACAACAACAC
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAACAGTG
TTTCATTRCC---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTCATAACAGTG
ACATTCATGACACG-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTCATAACAGTG
NNATTGCATAANN---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A A C G T A C G T A C G T

HLF/MA0043.3/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTCATAACAGTG
NNGTTGCATAACNN--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
G C A T C A G T T C A G G A C T C A G T C T A G G A T C T C G A G A C T G T C A C G T A A G T C G T C A G C T A A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTCATAACAGTG
ATTTGCATAACAATG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCATAACAGTG----
NNNNTGCCAGTGATTG
A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTCATAACAGTG
ATTTGCATAACAAAG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C T G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G