Information for 14-AAACAAGGGA (Motif 17)

C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-7.112e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif76.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background115.5 +/- 72.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----AAACAAGGGA---
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAGGGA
VRAACAATGG-
A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AAACAAGGGA---
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAACAAGGGA
GAACAATGGN
C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAGGGA
AAAACAAAGG-
A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAACAAGGGA
RAACAATGGN
C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAGGGA
AAAACAATGG-
A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

SOX4/MA0867.2/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAACAAGGGA
GAACAAAGGG
C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAACAAGGGA
VVRRAACAATGG-
A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T

FOXK1/MA0852.2/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AAACAAGGGA
AATGTAAACAAGGC-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C T G C G T A
C G T A C T G A C A G T T C A G C G A T T G C A T G C A G T C A A G T C G T C A T C G A T A C G T A C G T G A C A C G T