Information for 4-GATTATTACA (Motif 9)

C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
Reverse Opposite:
A C G T C T A G A C G T G T C A C G T A A C G T G T C A C G T A C G A T G A T C
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.808
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif375.7
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets110.5 +/- 43.6bp
Average Position of motif in Background96.0 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GATTATTACA---
TTATTAGTACATAN
A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GATTATTACA
AATTATT---
C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATTATTACA
-ATTGTTA--
C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GATTATTACA---
TCGCGATAATTACCGAC
A C G T A C G T A C G T A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTATTACA
CGGATTAN----
A C G T A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GATTATTACA
RGGATTAR----
A C G T A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATTATTACA
GGGATTAN----
A C G T A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GATTATTACA
TTGCCCGGATTAGG---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATTATTACA--
AATATTAATAAAGA
A C G T A C G T C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATTATTACA
-ATTGTT---
C T A G C G T A C G A T A C G T T C G A A C G T A C G T G T C A G A T C C G T A
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T