Information for 22-CCCTGCGTGTRA (Motif 24)

A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
Reverse Opposite:
A G C T A G T C C G T A G T A C C G T A T A G C C T A G A G T C C G T A A C T G A C T G A C T G
p-value:1e-4
log p-value:-9.655e+00
Information Content per bp:1.828
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets128.9 +/- 34.9bp
Average Position of motif in Background111.1 +/- 66.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTGCGTGTRA
--TTGCGTGCVA
A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCTGCGTGTRA
---TGCGTG---
A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

CTCFL/MA1102.2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTGCGTGTRA
GCGCCCCCTGNN-----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

MAZ/MA1522.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCCTGCGTGTRA
CGCCCCTCCCC----
A C G T A C G T A C G T A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCTGCGTGTRA
-GCTGTG-----
A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

GABPA/MA0062.3/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCTGCGTGTRA
CCCACTTCCTGTTT
A C G T A C G T A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A G T C A G T C G A T C C T G A A G T C G C A T A C G T G A T C G T A C C A G T A T C G A G C T A G C T G A C T

ETV4/MA0764.2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCCTGCGTGTRA
NNCTTCCTGN--
A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T

TBXT/MA0009.2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCGTGTRA
TCACACCTAGGTGTGA
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

ETV1/MA0761.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCGTGTRA
NNCACTTCCTGTNN
A C G T A C G T A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A G C T A G C T G A T C C T G A A G T C C G A T A C G T G T A C T G A C A C G T A T C G A G C T A G C T G A C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGCGTGTRA
TTCCCCCTAC------
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C T A G A G T C A C T G A C G T A C T G A C G T C T A G C T G A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T