Information for 2-GCTCGTTAGGCG (Motif 2)

A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G
Reverse Opposite:
G T A C A T C G A G T C A G T C C G A T C T G A C G T A A T G C A C T G C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets136.0 +/- 28.3bp
Average Position of motif in Background107.9 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0098.1_Lhx8/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTCGTTAGGCG-
CACCGCTAATTAGNNGN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCGTTAGGCG
AGCTCATTAT---
A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTCGTTAGGCG
NNCTCATTAT---
A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCTCGTTAGGCG-
CACCGCTAATTAGCGGT
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCTCGTTAGGCG-
NNNCGCTAATTAGNNGA
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCTCGTTAGGCG-
NNNACCTCATTATCNTN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCTCGTTAGGCG-
GCAACCTCATTATNNNN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTCGTTAGGCG
NGCTN--------
A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTCGTTAGGCG--
GGGCCTGAGGCGGG
A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTCGTTAGGCG
GGGGCTYGKCTGGGA
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G A C G T A G C T C G T A A C T G A C T G A T G C A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A