Information for 12-CCCCTATAGCCA (Motif 17)

A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T C G T A A G C T C G T A A C T G A C T G C T A G A C T G
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.0 +/- 42.5bp
Average Position of motif in Background78.1 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCTATAGCCA
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZBTB6/MA1581.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCCTATAGCCA-
GTCCTTGAGCCCG
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTATAGCCA-
CCCCCTTGGGCCCC
A C G T A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCCTATAGCCA
CACCTGTTGC--
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCCCTATAGCCA----
----ACTAGCCAATCA
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCCCTATAGCCA--
-----CGTGCCAAG
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTATAGCCA
TTCCCCCTAC-----
A C G T A C G T A C G T A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCCCTATAGCCA
NCNGTGTAGACG
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCCCTATAGCCA-
-----BCAGACWA
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCCCTATAGCCA
--CGTCTAGACA
A G T C A G T C A G T C G T A C A C G T C T G A A C G T C G T A A C T G A G T C A G T C C G T A
A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A