Information for 2-AATAGCTATTCT (Motif 2)

C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
Reverse Opposite:
C G T A A T C G C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T
p-value:1e-15
log p-value:-3.669e+01
Information Content per bp:1.957
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets133.1 +/- 40.5bp
Average Position of motif in Background75.3 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21/MA0832.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATAGCTATTCT
GCAACAGCTGTTGT
A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATAGCTATTCT
AACAGCTGTT--
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATAGCTATTCT
AACAGCTGTT--
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AATAGCTATTCT
CCTTAATNGNTTTT--
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AATAGCTATTCT---
-----CTATTTTTGG
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

ZNF341/MA1655.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATAGCTATTCT-
-NNGGCTGTTCCN
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T A C G T
A C G T A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATAGCTATTCT
AACAGCTGAT--
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATAGCTATTCT
--CGGCTGTTCC
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T
A C G T A C G T G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AATAGCTATTCT----
----KCTATTTTTRGH
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATAGCTATTCT----
----GCTATTTTTAGC
C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C G T A C G T A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C