Information for 5-TAATRWTTCC (Motif 13)

A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
Reverse Opposite:
C T A G C T A G C T G A C G T A C G A T G A T C G T C A A C G T A C G T C G T A
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.763
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif5.34%
Number of Background Sequences with motif643.9
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets91.7 +/- 58.4bp
Average Position of motif in Background98.4 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB4/MA1499.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATRWTTCC
NTAATGAT---
A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAATRWTTCC
NTAATGAN---
A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAATRWTTCC
NTAATGAN---
A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAATRWTTCC
NTAATKGTTT-
A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAATRWTTCC
NTAATGAC---
A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C A C G T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATRWTTCC-
NTAATGGTTTTN
A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C A C G T
A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAATRWTTCC
NNTAATTANN--
A C G T A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAATRWTTCC
GKTAATGR----
A C G T A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TAATRWTTCC
-AATAATT--
A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TAATRWTTCC
NNTAATTANN--
A C G T A C G T A C G T C G T A C G T A A C G T C T A G C G T A A C G T G A C T A G T C A G T C
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T