Information for 11-CCCTGCGTGT (Motif 24)

A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C T G A T G C C G T A C T A G A C T G A T C G
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.960
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif153.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets90.3 +/- 41.7bp
Average Position of motif in Background103.0 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CCCTGCGTGT
---TGCGTG-
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCCTGCGTGT--
--TTGCGTGCVA
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGCGTGT-
NNGCNCTGCGCGGC
A C G T A C G T A C G T A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGCGTGT
DCTCAGCAGG-
A C G T A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCTGCGTGT--
-CATGCGGGTAC
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCGTGT----
NNNNATGCGGGTNNNN
A C G T A C G T A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCCTGCGTGT--
-CTTGAGTGGCT
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCTGCGTGT-
-TATGCGGGTA
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCTGCGTGT----
--NTGGGTGTGGCC
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCTGCGTGT
--GGACGTGC
A T G C A G T C A G T C A C G T A T C G G T A C A C T G A C G T A C T G A C G T
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C