Information for 5-AGGACCACTCAT (Motif 6)

C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T
Reverse Opposite:
C G T A C G A T A C T G C G T A A C T G A C G T A C T G A C T G G C A T A G T C A G T C A C G T
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.888
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets97.9 +/- 66.0bp
Average Position of motif in Background115.5 +/- 53.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGGACCACTCAT
--GTACACTCAC
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T
A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGACCACTCAT-
-GGACCACCCACG
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGACCACTCAT---
-TAACCACTCAAGAA
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGACCACTCAT--
CATAAGACCACCATTAC
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGGACCACTCAT
--AASCACTCAA
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGACCACTCAT-
--AGCCACTCAAG
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGACCACTCAT-
-AGACCACCCASR
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T
A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGACCACTCAT--
NNAGTCCCACTCNNNN
A C G T A C G T C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGACCACTCAT--
---ACCACTCAAAA
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

GLI3/MA1491.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGACCACTCAT----
-AGACCACCCACGTCG
C G T A A C T G A C T G C G T A A G T C G T A C C G T A A G T C A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G