Information for 11-GTGCCAAAGC (Motif 16)

A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.705e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif42.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background98.9 +/- 76.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAAAGC
GGTGCCAAGT-
A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAAAGC
CGTGCCAAG--
A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGCCAAAGC
TTGCCAAG--
A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGCCAAAGC
ATGCCAACC-
A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCAAAGC
NNTGCCAAGNN
A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTGCCAAAGC--
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGCCAAAGC-------
-TGCCAAAATAAACANN
A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGCCAAAGC
DAGGTGTBAA---
A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGCCAAAGC
ATGCCCACC-
A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTGCCAAAGC
-TGCCAGCB-
A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G A G T C
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T