Information for 2-CCCTTCAGGTTT (Motif 3)

A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C A G T C A C G T A C T G C G T A C G T A A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background192.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCCTTCAGGTTT-
--TATCAGGTTAC
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

Prdm15/MA1616.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCCTTCAGGTTT----
-NNTCCAGGTTTTCCN
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A G T C A C G T G A T C G A T C C T G A A C T G T C A G G A C T G A C T A G C T A G C T T G A C G A T C G A C T

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCCTTCAGGTTT-
-NNTTGAGGTTNN
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

SIX2/MA1119.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCCTTCAGGTTT-----
-GTATCAGGTTTCAGNN
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

PB0020.1_Gabpa_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTCAGGTTT--
NNNNACTTCCGGTATNN
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T G A G T A C C T G A A G T C C G A T C G A T A G T C A G T C A C T G A T C G G A C T C G T A C G A T A C G T C A T G

ELF4/MA0641.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTTCAGGTTT
CACTTCCGGGTT
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T

ELF2/MA1483.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTTCAGGTTT
NACTTCCGGGTT
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A G T C C G A T A G C T G A T C A G T C C A T G A T C G C A T G C G A T G C A T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCTTCAGGTTT
--CTTCCGGT--
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCTTCAGGTTT
NACTTCCGGT--
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T A C G T

ERF/MA0760.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCTTCAGGTTT
CACTTCCGGT--
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A G T C T C G A A G T C C G A T A C G T A T G C A G T C A C T G T C A G A G C T A C G T A C G T