Information for 9-ATAGGCACMA (Motif 17)

C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G A T C T A G A T G C G A T C A C G T C G T A A C G T
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.820
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif327.7
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets103.8 +/- 45.0bp
Average Position of motif in Background96.7 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATAGGCACMA
ATATGCAAAT
C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATAGGCACMA
NNTTGGCANN-
A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATAGGCACMA---
AAGCATACGCCCAACTT
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATAGGCACMA----
AAAATATGCATAATAAA
A C G T A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATAGGCACMA
GHATATKCAT--
A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATAGGCACMA--
AAATAAGAAAAAAC
A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATAGGCACMA----
-NNGGCTCAAGGNN
C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATAGGCACMA--
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

BHLHE22/MA0818.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATAGGCACMA
ACCATATGTT---
A C G T A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ATAGGCACMA
NNAGATAAGNN---
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A T C G A G T C C G T A T A G C G T A C C G T A
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T A C G T A C G T