| p-value: | 1e-8 |
| log p-value: | -1.898e+01 |
| Information Content per bp: | 1.919 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 1.04% |
| Number of Background Sequences with motif | 6.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 102.7 +/- 46.2bp |
| Average Position of motif in Background | 96.6 +/- 71.2bp |
| Strand Bias (log2 ratio + to - strand density) | 2.3 |
| Multiplicity (# of sites on avg that occur together) | 1.20 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ACTGCAGGATAA GAGCACAGCAGGACA- |
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PB0205.1_Zic1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ACTGCAGGATAA CCACACAGCAGGAGA- |
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Zic1::Zic2/MA1628.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ACTGCAGGATAA CACAGCAGGGG-- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ACTGCAGGATAA CACAGCAGGGGG- |
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PB0206.1_Zic2_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ACTGCAGGATAA CCACACAGCAGGAGA- |
|
|
|
Zic2/MA1629.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ACTGCAGGATAA CTCACAGCAGGGGG- |
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|
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ACTGCAGGATAA CHCAGCRGGRGG- |
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|
SA0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACTGCAGGATAA------ NNCCTGNAAAAAAAAAAAAA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACTGCAGGATAA- DCHCAGCAGGRGGCC |
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SA0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACTGCAGGATAA------ NNCCTGNAAAAAAAAAAAAA |
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