Information for 6-ACCTATATGC (Motif 14)

C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T
p-value:1e-3
log p-value:-8.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background98.2 +/- 77.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORC/MA1151.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATGC
TGACCTANTTAN
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORB/MA1150.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACCTATATGC
NTGACCTAATT--
A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACCTATATGC
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACCTATATGC
--CCATATGT
C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATGC
TGACCTARTT--
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATGC
TGACCTARTT--
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCTATATGC
TGACCTTGAT--
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACCTATATGC----
----ATATGCAAAT
C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

SRF/MA0083.3/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACCTATATGC---
TGNCCATATATGGTCA
A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

BHLHE22/MA0818.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACCTATATGC-
-ACCATATGTT
C G T A A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T