Information for 22-CTCTGGGTGCCC (Motif 37)

A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G T A A T G C A G T C G T A C C G T A A C T G C G T A A C T G
p-value:1e-2
log p-value:-4.710e+00
Information Content per bp:1.902
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets90.2 +/- 49.9bp
Average Position of motif in Background88.2 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCTGGGTGCCC------
--GGGTGTGCCCAAAAGG
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CTCTGGGTGCCC---
------ATGCCCACC
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCTGGGTGCCC----
NNNGGGGCGCCCCCNN
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCTGGGTGCCC-
CTCCCTGGGAGGCCN
A C G T A C G T A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTCTGGGTGCCC---
------CTGCCCGCA
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PLAGL2/MA1548.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTGGGTGCCC-
---NGGGGGCCCN
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCTGGGTGCCC-
-RGTTAGTGCCCY
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCTGGGTGCCC-
-YSTGGGTGGTCT
A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T
A C G T A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGGTGCCC-
TGACCTCTCNNTGACCT
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGGGTGCCC-
BTGACCTCTNNHTGACCY
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T C A T G C T A G A T C G A C G T C T A G A G T C A G T C A G T C A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T