Information for 5-GGGTACCCTAGC (Motif 5)

A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T C G T A A C T G A C T G A C T G A C G T C G T A A G T C A G T C G T A C
p-value:1e-12
log p-value:-2.987e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.9 +/- 42.7bp
Average Position of motif in Background110.6 +/- 50.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGTACCCTAGC----
-TGTTKCCTAGCAACM
A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGTACCCTAGC--
GGGTGTGCCCAAAAGG
A C G T A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGGTACCCTAGC
GCTGGGGGGTACCCCTT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGTACCCTAGC
TGGGCCCCCT---
A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C
A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGTACCCTAGC------
---TACCATAGCAACGGT
A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGGTACCCTAGC
NNNGGGGCGCCCCCNN
A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGGTACCCTAGC
TCTTTGGCGTACCCTAA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGTACCCTAGC----------
TGTGACCCTTAGCAACCGATTAA
A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

RFX1/MA0509.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGGTACCCTAGC-----
---TNCCATAGCAACNN
A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGTACCCTAGC----
NTCNTCCCCTATNNGNN
A C G T A C T G C T A G A C T G A C G T T G C A A G T C A G T C A G T C A C G T C T G A A C T G A G T C A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A