Information for 17-CACTGGRAGA (Motif 27)

A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A
Reverse Opposite:
A G C T A G T C A C G T G A C T A T G C A G T C G T C A C A T G A C G T A C T G
p-value:1e-4
log p-value:-9.842e+00
Information Content per bp:1.820
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif557.0
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets93.9 +/- 57.9bp
Average Position of motif in Background101.7 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CACTGGRAGA--
CAATCACTGGCAGAAT
A C G T A C G T A C G T A C G T A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CACTGGRAGA
---TGGAAAA
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACTGGRAGA-
-AATGGAAAAT
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACTGGRAGA-
-NATGGAAAAN
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACTGGRAGA-
-AATGGAAAAT
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACTGGRAGA
-ACCGGAAG-
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACTGGRAGA-
-NNTGGAAANN
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC4/MA1525.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACTGGRAGA-
-AATGGAAAAT
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACTGGRAGA-
-CCTGGGAAAG
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACTGGRAGA-
-CSTGGGAAAD
A G T C G T C A G T A C A C G T A C T G A T C G C T G A C G T A C T A G C T G A A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A