Information for 8-GCTGATGSACAT (Motif 8)

A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T T A G C A G T C C G T A C A G T G T A C C G T A A C T G G T A C
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.842
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets139.3 +/- 36.0bp
Average Position of motif in Background112.0 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGATGSACAT
--TTATGCAAAT
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTGATGSACAT-
--ATATGCAAATT
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

MXI1/MA1108.2/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTGATGSACAT---
-----GACACATGGC
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTGATGSACAT--
--TTATGCAAATTA
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGATGSACAT---
--ATATGCAAATNNN
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGATGSACAT-
-BTGABTGACAGS
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGATGSACAT-
-NTGATTGACAGN
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTGATGSACAT-
-CYWSTGGTCARA
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T A C G T
A C G T G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATGSACAT
NGCTN--------
A C G T A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTGATGSACAT
-ATGATGCAAT-
A C T G A G T C A C G T A C T G G C T A C G A T A C T G A T C G C G T A A G T C C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T