| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 83.0 +/- 0.0bp |
| Average Position of motif in Background | 152.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 6 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA ------AGGTCA |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA ----TRAGGTCA |
|
|
|
PB0153.1_Nr2f2_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA---- CGCGCCGGGTCACGTA |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA --ATCAAGGTCA |
|
|
|
ESRRA/MA0592.3/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA-- -GCTCAAGGTCACA |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA- ----CGAGGTCAC |
|
|
|
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCCACCAGGTCA CCACACAGCAGGAGA |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA- -----GAGGTCAT |
|
|
|
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | CCCACCAGGTCA- ---TCAAGGTCAN |
|
|
|
Zic1::Zic2/MA1628.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCCACCAGGTCA CACAGCAGGGG- |
|
|
|