Information for 21-CCATTGGTGG (Motif 31)

A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C G T A C T G A C T G
p-value:1e-1
log p-value:-2.732e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.8 +/- 33.7bp
Average Position of motif in Background125.4 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCATTGGTGG
CCATTGTTC-
A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCATTGGTGG
CCATTGTTYB
A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCATTGGTGG
CCGATTGGCT-
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCATTGGTGG
CCWTTGTY--
A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATTGGTGG
NCCATTGTTC-
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Isl1/MA1608.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCATTGGTGG
ATCCATTAGCA-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T

SOX14/MA1562.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCATTGGTGG-
-CATTGTTCGG
A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T
A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGGTGG
NNCCATTGTNN-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCATTGGTGG--
CCATTGTTYYBB
A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T A C G T
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGGTGG
NNCCATTGTNN-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T