Information for 15-ATGGATASTCCC (Motif 24)

C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
Reverse Opposite:
C T A G C T A G A T C G C G T A A T C G C G A T G T C A A C G T G T A C A G T C C G T A A G C T
p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.842
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets126.2 +/- 30.8bp
Average Position of motif in Background81.0 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATGGATASTCCC
--GGAAATTCCC
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATGGATASTCCC
--GGAAATTCCC
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATGGATASTCCC
--GGAAATCCCC
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATGGATASTCCC
--GGAAANCCCC
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGGATASTCCC
ATGAATATTC--
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGGATASTCCC-
-TGGAATGTACCA
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C A C G T
A C G T C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGGATASTCCC-
-GGGAAATCCCCN
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGGATASTCCC
ATGMATATDC--
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGGATASTCCC
AATGGAAAAT---
A C G T C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGGATASTCCC-----
NTAGTTAATCCCCTTAN
C T G A A C G T A C T G C A T G C G T A C A G T C G T A A T G C A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A