Information for 3-GGGATAAA (Motif 32)

C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A
Reverse Opposite:
A C G T A G C T A C G T G C T A G C A T A G T C G A T C G A T C
p-value:1e-4
log p-value:-9.933e+00
Information Content per bp:1.612
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif28.79%
Number of Background Sequences with motif9748.6
Percentage of Background Sequences with motif19.71%
Average Position of motif in Targets96.0 +/- 55.7bp
Average Position of motif in Background99.8 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GGGATAAA----
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGGATAAA-----
TAGAGGGATTAAATTTC
A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GGGATAAA-----
TGTAGGGATTAATTGTC
A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGGATAAA----
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGGATAAA----
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGGATAAA-----
TGAAGGGATTAATCATC
A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGGATAAA-----
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GGGATAAA----
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GGGATAAA-----
NANAGGGATTAATTATN
A C G T A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGATAAA-
GGGATTANN
C T A G C T A G T C A G C G T A C G A T T G C A T C G A T G C A A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G