Information for 20-TGCCACAGTAGG (Motif 33)

A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A G T C A C G T A C T G A C G T A C T G A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.375e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 20.6bp
Average Position of motif in Background78.5 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.75
Offset:4
Orientation:forward strand
Alignment:TGCCACAGTAGG--
----ATAGTAGGTG
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGCCACAGTAGG---
-CTCACAGCAGGGGG
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGCCACAGTAGG---
---CACAGCAGGGGG
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCCACAGTAGG---
GCACAYAGTAGGKCY
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

OSR1/MA1542.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGCCACAGTAGG-
---NACAGTAGCN
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T
A C G T A C G T A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGCCACAGTAGG--
---CACAGCAGGGG
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCCACAGTAGG---
GAGCACAGCAGGACA
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGCCACAGTAGG---
---CHCAGCRGGRGG
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCCACAGTAGG---
CCACACAGCAGGAGA
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCCACAGTAGG----
ATGTACAGTAGCAAAG
A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G