Information for 10-TTGGAGATTC (Motif 15)

A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A G T C A C G T A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.009e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif31.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background92.3 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAGATTC-
NNNTGGGGATTNN
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTGGAGATTC--
--GGAAATTCCC
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTGGAGATTC--
--GGAAATTCCC
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTGGAGATTC-
-GGGGATTTCC
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGGAGATTC--
-TGTGGATTNNN
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGGAGATTC-
NNTGTGGATTSS
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGGAGATTC----
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTGGAGATTC----
--GGGGATTCCCCC
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTGGAGATTC---
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGGAGATTC--
NGGGGATTTCCC
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C