Information for 3-TGCAGTGCACTT (Motif 3)

A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.5 +/- 55.5bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTGCACTT
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCAGTGCACTT----
CAGATGTGCACATACGT
A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCAGTGCACTT---
CGAACAGTGCTCACTAT
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TGCAGTGCACTT--
------GCACTTAA
A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCAGTGCACTT-----
--CCTTGCAATTTTTNN
A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGCAGTGCACTT---
------CCACTTGAA
A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGCAGTGCACTT---
-----ACCACTTGAA
A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCAGTGCACTT-----
-NNATTGGACTTTNGNN
A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCAGTGCACTT----
TACATGTGCACATAAAA
A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NR1I3/MA1534.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCAGTGCACTT-
----ATGAACTTT
A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T