Information for 17-GACACYAGGGCA (Motif 25)

A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A G T C A C G T C T A G A C T G A C G T C T A G A C G T A G T C
p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.937
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.0 +/- 49.2bp
Average Position of motif in Background104.1 +/- 84.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GACACYAGGGCA----
-AAWCTAGGTCARDNN
A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACACYAGGGCA-
-WAABTAGGTCAV
A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACACYAGGGCA-
NNAGGGACAAGGGCNC
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GACACYAGGGCA
GTAGGTCACTGGGTCA
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACACYAGGGCA-----
-NNNNTTGGGCACNNCN
A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

NR1D1/MA1531.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GACACYAGGGCA-
GGGTCAGTAGGTCAG
A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C G T
T C A G C A T G C T A G A C G T A G T C C G T A T A C G A C G T T C G A A C T G C T A G A C G T A G T C C T G A C T A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GACACYAGGGCA--
----CAAGGHCANV
A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACACYAGGGCA
TGCCCNNAGGGCA
A C G T A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACACYAGGGCA
TGCCCTNAGGGCA
A C G T A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACACYAGGGCA
TGCCCTGAGGGCA
A C G T A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A