Information for 6-RCATCATC (Motif 35)

T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C
Reverse Opposite:
A T C G T C G A C G A T C T A G T C G A G C A T A T C G A G C T
p-value:1e-2
log p-value:-6.240e+00
Information Content per bp:1.639
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif24.39%
Number of Background Sequences with motif9471.4
Percentage of Background Sequences with motif19.24%
Average Position of motif in Targets94.3 +/- 55.1bp
Average Position of motif in Background100.1 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN/MA0488.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---RCATCATC--
ATGACATCATCNN
A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RCATCATC
TCAGTCTT
T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

ATF4/MA0833.2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----RCATCATC-
NNATTGCATCATNN
A C G T A C G T A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---RCATCATC
ATTGCATCAT-
A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---RCATCATC
ATTGCATCAK-
A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RCATCATC--
AGATAATCCC
T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T A C G T
T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------RCATCATC-
NNGATTGCATCATNN
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------RCATCATC-
ADGGYAGYAGCATCT
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----RCATCATC---
NATGACATCATCNNN
A C G T A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

CREB1/MA0018.4/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----RCATCATC-
NATGACATCANNN
A C G T A C G T A C G T A C G T T C G A T A G C C G T A A G C T G A T C G C T A A G C T T A G C A C G T
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A