Information for 10-TAGTGACT (Motif 34)

A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
Reverse Opposite:
G T C A A C T G C G A T A T G C C G T A A G T C A C G T G T C A
p-value:1e-2
log p-value:-6.123e+00
Information Content per bp:1.862
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif1712.8
Percentage of Background Sequences with motif3.51%
Average Position of motif in Targets92.4 +/- 53.5bp
Average Position of motif in Background101.4 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAGTGACT
NCGTGACN
A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAGTGACT
TTRAGTGSYK
A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAGTGACT----
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAGTGACT-
NHGTCGTGAYDN
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

PBX3/MA1114.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TAGTGACT-----
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGACT
TTGAGTGSTT
A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TAGTGACT
NNTTGAGTGNN-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAGTGACT
CTTGAGTGGCT
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAGTGACT---
GGATGACTCAT
A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T A C G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAGTGACT
CTYRAGTGSY-
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G C G T A A G T C A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T