Information for 7-TCACATACAC (Motif 19)

A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C
Reverse Opposite:
C T A G C G A T C A T G A G C T C T G A C G A T T A C G A C G T C T A G C T G A
p-value:1e-5
log p-value:-1.328e+01
Information Content per bp:1.837
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif4.99%
Number of Background Sequences with motif785.8
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets98.6 +/- 53.2bp
Average Position of motif in Background103.6 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCACATACAC-----
GACCACATTCATACAAT
A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCACATACAC-
NNCTCACCTCCTNN
A C G T A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCACATACAC
GCACGTACCC
A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

KLF9/MA1107.2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACATACAC---
CAGCCACACCCACCCC
A C G T A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C A C G T A C G T A C G T
T G A C T C G A T A C G T G A C A G T C T G C A T A G C T C G A A T G C T G A C A G T C G T C A A G T C G T A C A G T C T G A C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCACATACAC--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCACATACAC
GACACATGGC-
A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCACATACAC
ATAACCACTTAAA-
A C G T A C G T A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCACATACAC
GCACGTAY--
A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

SPIB/MA0081.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCACATACAC----
TTTCACTTCCTCTTTT
A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C A C G T A C G T A C G T A C G T
G A C T G A C T A G C T A T G C C G T A A T G C G C A T A C G T G A T C G A T C A G C T A G T C G C A T G A C T G A C T A G C T

USF2/MA0526.3/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCACATACAC-
NNGTCACATGACNN
A C G T A C G T A C G T A G C T A G T C G T C A A T G C C G T A G A C T C T G A G A T C C G T A A G T C A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A