Information for 13-GGTGTGAATM (Motif 22)

A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
Reverse Opposite:
A C T G C G T A G A C T G A C T A T G C G T C A A G T C T C G A G T A C A G T C
p-value:1e-4
log p-value:-1.086e+01
Information Content per bp:1.758
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif49.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets107.1 +/- 53.0bp
Average Position of motif in Background97.0 +/- 60.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
AAGGTGTGAA--
A C G T A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
AAGGTGTGAAA-
A C G T A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTGAATM--
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTGAATM
AGGTGTTAAT-
A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
GAGGTGTGAA--
A C G T A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAATM
AGGTGTGA---
A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

TBX18/MA1565.1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GGTGTGAATM
GGAGGTGTGAAA-
A C G T A C G T A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGAATM
TAGGTGTGAAG-
A C G T A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAATM
AGGTGTGAAA-
A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAATM
AGGTGTGAAA-
A C G T A C T G C A T G A G C T A C T G A C G T T A C G C T G A C T G A C G A T G T A C
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T