Information for 1-TCAGAGCC (Motif 19)

A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T G T A C A G C T C T A G C G T A
p-value:1e-4
log p-value:-1.135e+01
Information Content per bp:1.913
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif1144.9
Percentage of Background Sequences with motif2.33%
Average Position of motif in Targets87.0 +/- 59.2bp
Average Position of motif in Background100.7 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCAGAGCC
-CGGAGC-
A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCAGAGCC
---CAGCC
A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGCC--
RGTTAGTGCCCY
A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

TCF7/MA0769.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCAGAGCC
ANATCAAAGNN
A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGCC--
GGTTAGAGACCT
A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGCC
AAATCACTGC-
A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGCC
ACATCAAAGG-
A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGCC------
AGCTCGGCGCCAAAAGC
A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGCC------
CCTTCGGCGCCAAAAGG
A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGCC
AAATCACAGCA
A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A C T G A G T C A G T C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A