Information for 24-TCATGGGCTT (Motif 35)

A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A G T C A G T C C T G A A C G T A C T G C G T A
p-value:1e-2
log p-value:-4.929e+00
Information Content per bp:1.951
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif45.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets95.6 +/- 48.2bp
Average Position of motif in Background107.8 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF682/MA1599.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCATGGGCTT------
NNAGGGGCTTGGCCNN
A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

RARG(var.3)/MA1553.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCATGGGCTT
AAGGTCATGACCTT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCATGGGCTT
AGTCACGC----
A C G T A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGGCTT
CCGATTGGCT-
A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCATGGGCTT
AAGGTCATGACCTT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCATGGGCTT--
TGATTGGCTANN
A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCATGGGCTT-
CTCATTGGCCAG
A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T A C G T
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCATGGGCTT-
---NGGGATTA
A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGGCTT
TTTNATTGCY--
A C G T A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGGCTT
GTCACGTGAT-
A C G T A C G T A G T C C G T A A G C T A C T G A C T G A C T G G T A C A C G T A C G T
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T