Information for 4-ATTGTAAGAC (Motif 14)

C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C G T
p-value:1e-4
log p-value:-9.833e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background107.3 +/- 70.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTAAGAC----
NNNATTTTACGACNNTN
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC9/MA0485.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTGTAAGAC
NTTTTACGAC
C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXD10/MA1506.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTGTAAGAC-
NTTTTACGACC
C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

HOXB9/MA1503.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTGTAAGAC
NTTTTACGAC
C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTGTAAGAC--
TAAGATTATAATACGG
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTAAGAC----
ANNATTTTACGACNTNA
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

SOX2/MA0143.4/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATTGTAAGAC
NNCCATTGTNN---
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTGTAAGAC-
AGGTGHCAGACA
A C G T C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTAAGAC--
NNNTTTNTAATACNG
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTGTAAGAC
ATTGTTA---
C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T