Information for 3-AGTCTTAACC (Motif 6)

C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A C G T A C T A G C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.869
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif81.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets126.5 +/- 46.3bp
Average Position of motif in Background88.4 +/- 50.9bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGTCTTAACC----
NNNNCTGTTAACNNTNN
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTCTTAACC---
TAAAGTCGTAAAACGT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTCTTAACC---
TAAAGTCGTAAAACAT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTCTTAACC---
TAAAGTCGTAAAATAG
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTCTTAACC----
TAAGGTCGTAAAATCCT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXD12/MA0873.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTCTTAACC-
AGTCGTAAAAA
C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGTCTTAACC---------
----TTAACCCTTTVNKKN
C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

HOXD10/MA1506.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTCTTAACC-
GGTCGTAAAAC
C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

HOXC9/MA0485.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTCTTAACC-
-GTCGTAAAAT
C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T
A C G T T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTCTTAACC----
CAAGGTCGTAAAATCTT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G A T A C G T C G T A G T C A T G A C G T A C A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T