Information for 7-CAGCCTGGCTCC (Motif 11)

A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
Reverse Opposite:
A C T G A C T G T C G A C T A G T A G C G T A C C G T A A T C G A C T G A G T C A C G T C T A G
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.779
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif156.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets99.6 +/- 62.4bp
Average Position of motif in Background97.2 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGGCTCC----
-TGCCTGCGYCMCCTT
A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C A C G T A C G T A C G T A C G T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCCTGGCTCC
CAGCC-------
A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTGGCTCC
DCTCAGCAGG-----
A C G T A C G T A C G T A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTGGCTCC
BCAGACWA-----
A C G T A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGCCTGGCTCC-
CTGTCTGTCACCT
A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGGCTCC
GAGCACAGCAGGACA--
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGGCTCC
GGGAACAGCCAC-----
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTGGCTCC
CACAGN--------
A C G T A C G T A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGGCTCC
CCACACAGCAGGAGA--
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGCCTGGCTCC
-TGCGTG-----
A G T C G T C A A C T G A G T C A T G C A C G T A C T G A T C G G A T C A G C T G T A C G T A C
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T