Information for 19-CGGGCCTTAA (Motif 27)

A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A
Reverse Opposite:
A C G T A G C T C G T A C G T A A C T G A C T G A G T C A G T C A G T C T A C G
p-value:1e-4
log p-value:-1.077e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif48.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets70.4 +/- 43.9bp
Average Position of motif in Background92.0 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCCTTAA
CNAGGCCT---
A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGGCCTTAA-
-TGACCTTGAN
A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCCTTAA----
GCTGACCTTGAACTN
A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCCTTAA
CTAGGCCT---
A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CGGGCCTTAA
GGGGCCGAGGCCTG--
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGGGCCTTAA-
NTCGCGCGCCTTNNN
A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

NR5A1/MA1540.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGGCCTTAA-
NTGACCTTGAN
A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGGCCTTAA-
-TGACCTTGAV
A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGGCCTTAA-
ANCGCGCGCCCTTNN
A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCCTTAA
NRRGGGTCTT--
A C G T A C G T A T G C A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T