Information for 4-ASCCTCGACCTG (Motif 5)

C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G A C T G A C G T A G T C A T C G C G T A A C T G A C T G A T C G C G A T
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.5 +/- 32.2bp
Average Position of motif in Background101.6 +/- 47.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF135/MA1587.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ASCCTCGACCTG----
--CCTCGACCTCCTGA
C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ASCCTCGACCTG
TGACCTTGACCT-
A C G T C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ASCCTCGACCTG
TGACCTTGACCT-
A C G T C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ASCCTCGACCTG
GGGGCCGAGGCCTG
A C G T A C G T C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ASCCTCGACCTG-
---RYHYACCTGB
C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G A C G T
A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

THRB/MA1574.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ASCCTCGACCTG
NTGACCTTTGACCCC
A C G T A C G T A C G T C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
T C G A G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ASCCTCGACCTG
NTGACCTTTGACCTN
A C G T A C G T A C G T C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

SNAI3/MA1559.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ASCCTCGACCTG--
----TGCACCTGTT
C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ASCCTCGACCTG
-----TGACCT-
C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ASCCTCGACCTG--
----TRCACCTGCY
C G T A A T G C A G T C A G T C C G A T T A G C A C T G C G T A A G T C A G T C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T