Information for 7-CCCTGCGTGT (Motif 10)

A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T
Reverse Opposite:
C G T A G T A C C G T A G T A C C A T G A T G C C T G A C T A G C T A G T A C G
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.719
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif8.42%
Number of Background Sequences with motif936.2
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets119.2 +/- 50.8bp
Average Position of motif in Background100.6 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CCCTGCGTGT
---TGCGTG-
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCCTGCGTGT--
--TTGCGTGCVA
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCCTGCGTGT
--GGACGTGC
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTGCGTGT
--RTACGTGC
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

ETV1/MA0761.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCGTGT--
NNCACTTCCTGTNN
A C G T A C G T A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T A C G T
A G C T A G C T G A T C C T G A A G T C C G A T A C G T G T A C T G A C A C G T A T C G A G C T A G C T G A C T

GABPA/MA0062.3/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTGCGTGT--
CCCACTTCCTGTTT
A C G T A C G T A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T A C G T
A G T C A G T C G A T C C T G A A G T C G C A T A C G T G A T C G T A C C A G T A T C G A G C T A G C T G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCTGCGTGT-
---TACGTGCV
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

IKZF1/MA1508.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTGCGTGT---
-NCTTCCTGTTNN
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T A C G T A C G T
A C G T T C G A A G T C G C A T A G C T A G T C G A T C G C A T A T C G A G C T A C G T A G C T A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGCGTGT-
NNGCNCTGCGCGGC
A C G T A C G T A C G T A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCCTGCGTGT---
---CACGTGTGCH
A T G C A G T C A G T C A G C T T A C G G T A C C A T G A C G T A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T