Information for 13-TCCTCAMGSGGT (Motif 20)

A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A T G C A G T C A C G T A C G T A C T G C G T A A C T G A C T G C G T A
p-value:1e-5
log p-value:-1.238e+01
Information Content per bp:1.919
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets81.7 +/- 37.2bp
Average Position of motif in Background133.6 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCCTCAMGSGGT
ATTGCCTCAGGCCA-
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCAMGSGGT---
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCTCAMGSGGT
NNCGCCTCAGGCNN-
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C A C G T

EBF1/MA0154.4/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCTCAMGSGGT-
AGTCCCCAGGGGACT
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T A C G T
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCTCAMGSGGT
--NTCAAGTGGN
A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCTCAMGSGGT
GTCCCCAGGGGA-
A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCCTCAMGSGGT
----CACGTGGN
A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCCTCAMGSGGT
----CACGTGNT
A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

RUNX3/MA0684.2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCTCAMGSGGT
AAAACCTCAAAT---
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T A C G T A C G T

ZNF263/MA0528.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCAMGSGGT
CCTCCTCCCCNN--
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A G T C A A C T G A T C G C T A G A C T G A C G T
T A G C A T G C A C G T T A G C T G A C C A G T T G A C T A G C A T G C G A T C T A G C A G T C A C G T A C G T