Information for 4-GGGCCACATAGC (Motif 5)

A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C G T A C T G A C G T A C T G A C T G A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background113.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGCCACATAGC
CCCTGGGGCCAGG----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCCACATAGC
KGGCCYCWTD--
A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGCCACATAGC
GTGGGCCCCA----
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGGCCACATAGC
--GACACATGGC
A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

USF1/MA0093.3/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGCCACATAGC--
NNGTCACATGACNN
A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C A C G T A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

USF2/MA0526.3/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGCCACATAGC--
NNGTCACATGACNN
A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGGCCACATAGC
--ACCACTTAA-
A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

MYCN/MA0104.4/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGCCACATAGC-
-GGCCACGTGGCC
A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C A C G T
A C G T T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

PLAGL2/MA1548.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCCACATAGC
TGGGCCCCCT---
A C G T A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCCACATAGC
NWAACCACADNN-
A C G T A C T G A C T G A C T G A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T