Information for 2-GCCTCAGAGCCG (Motif 4)

A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGAGCCG
NNCGCCTCAGGCNN-
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCTCAGAGCCG
ATTGCCTCAGGCCA-
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCTCAGAGCCG
GCCTCAGGGCAT
A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCAGAGCCG
KGGCCYCWTD----
A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTCAGAGCCG
SCCTSAGGSCAW
A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCTCAGAGCCG
TTGCCCTAGGGCAT
A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCTCAGAGCCG
TCACCTCTGGGCAG
A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGAGCCG
TGCCCCAGGGCA-
A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCAGAGCCG
TGCCCNGGGGCA-
A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCAGAGCCG
TGCCCTNGGGCA-
A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A C T G
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T