| p-value: | 1e-9 |
| log p-value: | -2.157e+01 |
| Information Content per bp: | 1.749 |
| Number of Target Sequences with motif | 30.0 |
| Percentage of Target Sequences with motif | 6.24% |
| Number of Background Sequences with motif | 772.7 |
| Percentage of Background Sequences with motif | 1.59% |
| Average Position of motif in Targets | 88.8 +/- 56.1bp |
| Average Position of motif in Background | 101.2 +/- 61.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACTTGACATT --YTGWCADY |
|
|
|
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACATT ARNTGACA-- |
|
|
|
Nr2e1/MA0676.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACATT- --TTGACTTTT |
|
|
|
MEIS1/MA0498.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACTTGACATT --TTGACAG- |
|
|
|
MEIS3/MA0775.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACTTGACATT --TTGACAGG |
|
|
|
NFIC/MA0161.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ACTTGACATT TACTTGGCAGA |
|
|
|
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACTTGACATT BTVATTWGCATA |
|
|
|
NR4A1/MA1112.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACATT--- -NNTGACCTTTNN |
|
|
|
PH0113.1_Nkx2-4/Jaspar
| Match Rank: | 9 |
| Score: | 0.68 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------ACTTGACATT TAAGCCACTTGAAATT |
|
|
|
NFIA/MA0670.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACATT NNTTGGCANN |
|
|
|