Information for 8-CCATTGCYAA (Motif 16)

A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
Reverse Opposite:
A G C T A G C T C T A G A C T G A G T C C G T A C T G A A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.490e+01
Information Content per bp:1.852
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif135.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets99.9 +/- 38.0bp
Average Position of motif in Background97.9 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CCATTGCYAA--
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGCYAA
NNCCATTGTNN-
A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGCYAA
NNCCATTGTNN-
A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCATTGCYAA
CCWTTGTY--
A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCATTGCYAA
CCATTGTTC-
A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCATTGCYAA
CCATTGTTYB
A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCATTGCYAA--
CCATTGTTYYBB
A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A A C G T A C G T
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATTGCYAA
NCCATTGTTC-
A C G T A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

SOX18/MA1563.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCATTGCYAA
GCATTGTN--
A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCATTGCYAA--
--GGTGCCAAGT
A G T C A G T C C G T A A G C T A C G T A C T G A G T C G A T C C T G A C T G A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T