| p-value: | 1e-1 |
| log p-value: | -2.732e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 0.36% |
| Number of Background Sequences with motif | 12.8 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 101.8 +/- 33.7bp |
| Average Position of motif in Background | 125.4 +/- 61.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 4.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SOX9/MA0077.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCATTGGTGG CCATTGTTC- |
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|
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCATTGGTGG CCATTGTTYB |
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|
|
NFY(CCAAT)/Promoter/Homer
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCATTGGTGG CCGATTGGCT- |
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|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCATTGGTGG CCWTTGTY-- |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCATTGGTGG NCCATTGTTC- |
|
|
|
Isl1/MA1608.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCATTGGTGG ATCCATTAGCA- |
|
|
|
SOX14/MA1562.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CCATTGGTGG- -CATTGTTCGG |
|
|
|
SOX13/MA1120.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCATTGGTGG NNCCATTGTNN- |
|
|
|
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCATTGGTGG-- CCATTGTTYYBB |
|
|
|
SOX2/MA0143.4/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCATTGGTGG NNCCATTGTNN- |
|
|
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