Information for 13-AAGATGTATA (Motif 23)

G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A
Reverse Opposite:
C G A T C T G A A G C T G T C A A G T C C G T A A C G T A T G C G A C T A C G T
p-value:1e-4
log p-value:-1.090e+01
Information Content per bp:1.785
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif395.4
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets98.7 +/- 48.0bp
Average Position of motif in Background99.7 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AAGATGTATA--
ANTNNTACATGTANNTN
A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AAGATGTATA--
ANTNTTACATGTATNTA
A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAGATGTATA---
AATATACATGTAAAACA
A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AAGATGTATA--
NNTATTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AAGATGTATA--
ANTATTACATGTANNNN
A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

FOXA1/MA0148.4/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAGATGTATA---
-NNATGTTTACAT
G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T A C G T
A C G T G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AAGATGTATA--
ANTTNTACATGTANTTN
A C G T A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

POL005.1_DPE/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGATGTATA
GAAGATGTT--
A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A
T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAGATGTATA---
---ATGAATATTC
G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

TWIST1/MA1123.2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAGATGTATA
ATTCCAGATGTTT-
A C G T A C G T A C G T A C G T G T C A C T G A A T C G C G T A C G A T A C T G C A G T T C G A A G C T C G T A
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T A C G T