Information for 3-TCCTGTCAGGTA (Motif 4)

A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCCTGTCAGGTA
-GCTGTCAA---
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCCTGTCAGGTA
--NTGTCAN---
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCCTGTCAGGTA
-VBTGWCAGCB-
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCCTGTCAGGTA
-CCTGTCAA---
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCCTGTCAGGTA
---TGTCANYT-
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCTGTCAGGTA
--YTGWCADY--
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCCTGTCAGGTA---
-----VCAGGTRDRY
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGTCAGGTA---
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTCAGGTA
ACTTCCTGTT-----
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCTGTCAGGTA
GSCTGTCACTCA
A C G T A G T C A G T C A C G T A C T G A C G T A G T C C G T A A C T G A C T G A C G T C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A