Information for 5-GCTSACAC (Motif 29)

C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C
Reverse Opposite:
C T A G A C G T C T A G A G C T T A G C T G C A C A T G A G T C
p-value:1e-2
log p-value:-6.647e+00
Information Content per bp:1.705
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif8.42%
Number of Background Sequences with motif2072.1
Percentage of Background Sequences with motif4.25%
Average Position of motif in Targets106.3 +/- 48.5bp
Average Position of motif in Background99.7 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX3/MA1566.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCTSACAC---
-NTCACACCTN
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCTSACAC--
--TCACACCT
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX6/MA1567.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCTSACAC---
-TTCACACCTN
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GCTSACAC--
--TCACACCT
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCTSACAC--
--TCACACCT
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCTSACAC-
TGCTGACTCA
A C G T C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCTSACAC--
--TCACACCT
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCTSACAC
-TTGACAG
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCTSACAC--
KTTCACACCT
C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCTSACAC-
VGCTGWCAVB
A C G T C T A G G T A C A C G T A T C G C T G A A G T C G T C A A G T C A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C