Information for 7-CAGCCTGGCTCC (Motif 10)

G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
Reverse Opposite:
A C T G C A T G G T C A C A T G T A G C T G A C C G T A A C T G A C T G A T G C C G A T C T A G
p-value:1e-7
log p-value:-1.688e+01
Information Content per bp:1.760
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif736.6
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets112.0 +/- 53.0bp
Average Position of motif in Background102.7 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCTGGCTCC
CAGCC-------
G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTGGCTCC
DCTCAGCAGG-----
A C G T A C G T A C G T G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGGCTCC----
-TGCCTGCGYCMCCTT
G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C A C G T A C G T A C G T A C G T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCCTGGCTCC-
CTGTCTGTCACCT
G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTGGCTCC
BCAGACWA-----
A C G T G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGGCTCC
GAGCACAGCAGGACA--
A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGGCTCC-
-TGTCTGDCACCT
G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGGCTCC
CCACACAGCAGGAGA--
A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCTGGCTCC
GGGAACAGCCAC-----
A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T A C G T A C G T A C G T A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGCCTGGCTCC----
---NNTGGCCCCAGNN
G A T C C G T A A T C G A G T C T A G C A C G T A C T G A T C G G A T C A C G T G A T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G