Information for 18-TGAGAGATAT (Motif 30)

A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T G T C A A G C T A G T C A G C T A G T C C G A T A G T C C G T A
p-value:1e-2
log p-value:-5.232e+00
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif41.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.7 +/- 24.2bp
Average Position of motif in Background100.4 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGAGAGATAT------
GACAGAGATATCAGTGT
A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGAGAGATAT---
--AAGGATATNTN
A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGATAT
CTTGAGTGGCT-
A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAGAGATAT
ATGTGGGAAA-
A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGAGAGATAT
NNNTTGAGTGGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

PKNOX1/MA0782.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGATAT---
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX3/MA1114.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGAGAGATAT----
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGAGAGATAT--
NTATTGACAGGTNNTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAGATAT
NNTTGAGTGNN--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGAGAGATAT--
GTATTGACAGGTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G C T G A A C G T C G T A A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T