Information for 4-GAACAGAGTGGG (Motif 4)

A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C A G T C C G T A A G T C A C G T G A T C A C G T A C T G A G C T A G C T G T A C
p-value:1e-13
log p-value:-3.158e+01
Information Content per bp:1.775
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif126.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets105.3 +/- 55.3bp
Average Position of motif in Background95.7 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAACAGAGTGGG
RHHCAGAGAGGB
A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAACAGAGTGGG---
GAACADWATGTTCTT
A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAACAGAGTGGG---
GRACAGWMTGTYCTB
A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAACAGAGTGGG--
NAGAACAGNCTGTNCT
A C G T A C G T A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAACAGAGTGGG--
CTCACACAATGGCGC
A C G T A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAGTGGG-
VAGRACAKNCTGTBC
A C G T A C G T A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAGTGGG---
GGGAACACAATGTTCCC
A C G T A C G T A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGAGTGGG---
AGNACANNNTGTNCTN
A C G T A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAACAGAGTGGG---
GCACAYAGTAGGKCY
A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAACAGAGTGGG-
--AAACAATGGAA
A C T G C T G A C T G A G T A C C G T A C A T G C G T A T C A G A C G T A C T G C T A G C T A G A C G T
A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A