Information for 8-CACTAAAGTAAC (Motif 9)

A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.0 +/- 0.0bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACTAAAGTAAC
ACCACTCAAAA---
A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CACTAAAGTAAC
CTTAACCACTTAAGGAT-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACTAAAGTAAC
TAACCACTCAAGAA--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTAAAGTAAC
RSCACTYRAG----
A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACTAAAGTAAC
AGCCACTCAAG----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTAAAGTAAC
NSCACTYVAV----
A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CACTAAAGTAAC----
----AATGTAACAATT
A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

FOXE1/MA1487.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTAAAGTAAC---
CCTTAAATAAACAAT
A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

HOXB13/MA0901.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACTAAAGTAAC
AACCAATAAAATTT-
A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CACTAAAGTAAC
CATAACCACTTAACAAC-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T