Information for 9-GCTTTATGGAGG (Motif 10)

A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets147.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATGGAGG
DGWTTTATGRCN-
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGGAGG
GTTTTATTGGG-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTTTATGGAGG-
NNNNTTTCTGGAGNN
A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

HOXA13/MA0650.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGGAGG
GTTTTATTGGN-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGGAGG
GTTTTATGGCC-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCTTTATGGAGG
AAATGATTTATGGCT-
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTATGGAGG
NNTGATTTATGNN--
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATGGAGG
TGATTTATGGCC-
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTTTATGGAGG
-TTTTATGGCB-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A C G T G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C A C G T

CDX4/MA1473.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGGAGG
GTTTTATTGCC-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T