Information for 5-TAATCCAC (Motif 18)

A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A A C G T A C G T C G T A
p-value:1e-2
log p-value:-5.508e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif378.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background102.0 +/- 75.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TAATCCAC---
SSAATCCACANN
A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TAATCCAC
CTAATCCC-
A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T

PITX2/MA1547.1/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TAATCCAC
ATAATCCC-
A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T

OTX2/MA0712.2/Jaspar

Match Rank:4
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---TAATCCAC-
NNCTAATCCCNN
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATCCAC
GCTAATCCCC
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATCCAC
CCTAATCCGC
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATCCAC
GCTAATCC--
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATCCAC
CTTAATCCC-
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATCCAC-
TCCAATCCACA
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TAATCCAC
NYTAATCCYB
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C C G T A A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T