Information for 8-AGAGCAGAATGG (Motif 13)

C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C G T C A A G C T A C G T A G T C A C G T A C T G A G T C A C G T T G A C A C G T
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.895
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif31.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets93.2 +/- 52.5bp
Average Position of motif in Background110.7 +/- 53.0bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317/MA1593.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAGAATGG
TAACAGCAGACT--
A C G T A C G T C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGAGCAGAATGG-----
---GGAGAAAGGTGCGA
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZNF140/MA1589.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAGAATGG-------
TAGGAGTGGAATTGCTGGGTC
A C G T A C G T C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A C A T G C T A G T C G A C T A G A G C T C T A G C A T G C G T A T C G A A G C T C G A T T C A G G A T C G C A T C T A G C T A G C T A G A G C T G A T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAGCAGAATGG-
-RHHCAGAGAGGB
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T
A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAGCAGAATGG--
---AAACAATGGCA
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAGCAGAATGG--
---AAACAATGGAA
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGAGCAGAATGG
--VRAACAATGG
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAGCAGAATGG-
---RAACAATGGN
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAGCAGAATGG-----
NNTNNACAATGGGANNN
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGAGCAGAATGG
--AAAACAATGG
C G T A A C T G C G T A C T A G G T A C C G T A A C T G C G T A C T G A A C G T A C T G A C T G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G