| p-value: | 1e-4 |
| log p-value: | -1.077e+01 |
| Information Content per bp: | 1.902 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.95% |
| Number of Background Sequences with motif | 18.5 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 108.0 +/- 42.4bp |
| Average Position of motif in Background | 91.6 +/- 59.3bp |
| Strand Bias (log2 ratio + to - strand density) | 0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.75 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CAGCTTATTCAT --GHATATKCAT |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CAGCTTATTCAT --GAATATTCAT |
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PH0001.1_Alx3/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGCTTATTCAT--- NTNAGCTAATTAGTTNA |
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POU6F2/MA0793.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGCTTATTCAT -AGCTCATTAT- |
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PH0135.1_Phox2a/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGCTTATTCAT---- NNACTAATTAATNNNN |
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|
|
PH0151.1_Pou6f1_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGCTTATTCAT--- NNNACCTCATTATCNTN |
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|
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PH0074.1_Hoxd1/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGCTTATTCAT--- NNNAGCTAATTAGCTTA |
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|
|
PH0154.1_Prrx1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGCTTATTCAT--- ANNAGTTAATTAGTTAN |
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|
|
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGCTTATTCAT----- GACCACATTCATACAAT |
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PH0150.1_Pou4f3/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGCTTATTCAT---- GACNTCATTAATAANN |
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