Information for 11-GAAACAGAAATT (Motif 12)

A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.234e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background93.8 +/- 66.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat2/MA1623.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GAAACAGAAATT
AGAAACAGAAACT
A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GAAACAGAAATT
GAAACTGAAACT
A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GAAACAGAAATT
GAAAGTGAAAGT
A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF8/MA0652.1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GAAACAGAAATT
TCGAAACCGAAACT
A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GAAACAGAAATT
GAAAMTGAAACT
A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PRDM4/MA1647.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GAAACAGAAATT
NAGAAACAGNN---
A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GAAACAGAAATT--
GGAAANTGAAACTNA
A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF4/MA1419.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GAAACAGAAATT-
CCGAAACCGAAACTA
A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GAAACAGAAATT
ACGAAAGCGAAAGT
A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAACAGAAATT
GRAASTGAAAST
A C T G C G T A C G T A C G T A A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T