Information for 6-CGAAGCAGAA (Motif 15)

A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C A C T G
p-value:1e-3
log p-value:-8.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background99.1 +/- 82.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat2/MA1623.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGAAGCAGAA---
AGAAACAGAAACT
A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGAAGCAGAA
NGAAGC----
A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGAAGCAGAA---
TCGAAACCGAAACT
A C G T A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF4/MA1419.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGAAGCAGAA----
CCGAAACCGAAACTA
A C G T A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

IRF9/MA0653.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGAAGCAGAA---
AACGAAACCGAAACT
A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

IRF5/MA1420.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGAAGCAGAA---
CCGAAACCGAAACT
A C G T A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGAAGCAGAA
NAGAAACAGNN
A C G T A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGAAGCAGAA---
ACGAAAGCGAAAGT
A C G T A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGAAGCAGAA---
-GAAACTGAAACT
A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

OSR2/MA1646.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGAAGCAGAA----
--AAACAGAAGCAG
A G T C A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G