Information for 4-CCTTAACACCTA (Motif 6)

A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.0 +/- 0.0bp
Average Position of motif in Background193.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CCTTAACACCTA
-ATTAACACCT-
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CCTTAACACCTA
-CTTCACACCTA
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CCTTAACACCTA
--TTVACACCTH
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CCTTAACACCTA
-TTTCACACCTN
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX6/MA1567.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCTTAACACCTA
--TTCACACCTN
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CCTTAACACCTA
---TCACACCT-
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CCTTAACACCTA
---TCACACCT-
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCTTAACACCTA
--TTMACACCTT
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTTAACACCTA
-TTTCACACCT-
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTTAACACCTA
-TTTCACACCT-
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T A C G T