Information for 9-AAGTARAGARGC (Motif 9)

C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
Reverse Opposite:
C T A G G T A C A G C T A C G T A G T C A C G T A G C T A C G T G T C A G T A C A C G T G A C T
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif98.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets132.5 +/- 54.8bp
Average Position of motif in Background88.5 +/- 53.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAGTARAGARGC--
--AAACAGAAGCAG
C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AAGTARAGARGC
------NGAAGC
C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGTARAGARGC
AAAGTAAACA---
A C G T C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTARAGARGC
AAAGTAAACA---
A C G T C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXK1/MA0852.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTARAGARGC-
AATGTAAACAAGGC
A C G T C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C A C G T
C G T A C T G A C A G T T C A G C G A T T G C A T G C A G T C A A G T C G T C A T C G A T A C G T A C G T G A C

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGTARAGARGC----
ATGTACAGTAGCAAAG
C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGTARAGARGC
ATGTAAACADGS
C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGTARAGARGC
TATGTAAACANG-
A C G T C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGTARAGARGC
AAATAAACA---
C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGTARAGARGC
AAGTAAACAAA-
C T G A C G T A C A T G C A G T C G T A T C G A C G T A A C T G C G T A C T G A A C T G A G T C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T