Information for 14-ACTATATTTAAA (Motif 17)

C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.876e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif35.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background96.3 +/- 68.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACTATATTTAAA-
----NATTCAAAT
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

MEF2A/MA0052.4/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTATATTTAAA-
NNTCTATTTTTAGNN
A C G T A C G T C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACTATATTTAAA--
---ATATTTACATA
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTATATTTAAA--
TGTATATATATACC
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACTATATTTAAA--
TTCTATTTTTAGNNN
A C G T C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACTATATTTAAA----
TCTTTATATATAAATA
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTATATTTAAA
KCTATTTTTRGH
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

LMX1B/MA0703.2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACTATATTTAAA--
---TTAATTAAANT
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTATATTTAAA
GCTATTTTTAGC
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACTATATTTAAA--
---ATATTTACATA
C G T A A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A