Information for 6-AGTGGAAGAT (Motif 13)

C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
Reverse Opposite:
T C G A A G C T A G T C G C A T A C G T A T G C G T A C G T C A G T A C G A C T
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.483
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif356.5
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets107.2 +/- 46.9bp
Average Position of motif in Background100.8 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTGGAAGAT
AATGGAAAAT
C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTGGAAGAT-
AGGTGHCAGACA
A C G T C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTGGAAGAT
--TGGAAAA-
C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTGGAAGAT
NATGGAAAAN
C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGTGGAAGAT--
AGGTGNCAGACAG
A C G T C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

NFATC4/MA1525.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTGGAAGAT
AATGGAAAAT
C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTGGAAGAT
-GTGGAT---
C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTGGAAGAT
AATGGAAAAT
C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

ZNF75D/MA1601.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTGGAAGAT
ATGTGGGAAA-
A C G T C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGAAGAT
GAAAGTGAAAGT-
A C G T A C G T A C G T C T G A C A T G C A G T C A T G T A C G T G C A C G T A T C A G T C G A A G C T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T