Information for 6-TGGCATACTGAG (Motif 11)

G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G
Reverse Opposite:
A G T C A C G T A T G C C G T A T C A G C A G T T C G A C A G T C T A G G A T C A G T C C T G A
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.758
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif208.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets114.9 +/- 49.8bp
Average Position of motif in Background99.9 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCATACTGAG--
----ATAATGAGGT
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

NR1D1/MA1531.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATACTGAG--
NTGACCTACTGACCC
A C G T G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGCATACTGAG-
---CCTGCTGAGH
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCATACTGAG---
NNTCCTGCTGTGNNN
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCATACTGAG----
TGACCCAGTGACCTAC
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCATACTGAG---
TCNCCTGCTGNGNNN
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCATACTGAG---
TNTCCTGCTGTGNNG
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGGCATACTGAG--
----NTAATGAGCT
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCATACTGAG-----
AAACATAATGAGGTTGC
G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATACTGAG
GGTTGGCAT------
A C G T A C G T A C G T G A C T A C T G C T A G G A T C G T C A A G C T G T C A A G T C A C G T A T C G C G T A C T A G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T