Information for 13-CTCCTTGCCG (Motif 20)

A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G C T A G G T A C C G T A C G T A A C T G A C T G C T G A A T C G
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets141.5 +/- 26.3bp
Average Position of motif in Background89.4 +/- 45.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFP57/MA1583.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCCTTGCCG----
-GCATTGCCGCAGT
A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTTGCCG
BNTGDCCTTG---
A C G T A C G T A C G T A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTTGCCG
NTGACCTTGAN-
A C G T A C G T A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCTTGCCG-
NNACTTGCCTT
A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCTTGCCG
GTGACCTTGRVN
A C G T A C G T A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

TFDP1/MA1122.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCTTGCCG---
--NNTTCCCGCCN
A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTTGCCG
TGACCTTGAN-
A C G T A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTTGCCG
TGACCTTGAV-
A C G T A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCTTGCCG--
--NANTGCSGCA
A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T
A C G T A C G T G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCCTTGCCG----
----TTCCCGCCWG
A T G C A G C T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G