Information for 10-CTAGCATC (Motif 34)

A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C T A G A G T C A C G T C G T A A C T G
p-value:1e-1
log p-value:-4.530e+00
Information Content per bp:1.944
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif631.1
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets89.9 +/- 49.2bp
Average Position of motif in Background98.3 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.70
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTAGCATC---
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTAGCATC--
SCCTAGCAACAG
A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTAGCATC---
TACCATAGCAACGGT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------CTAGCATC-------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTAGCATC-
TGTTKCCTAGCAACM
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTAGCATC--
ATTGCATCAK
A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTAGCATC--
ATTGCATCAT
A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTAGCATC
GGCTCYAKCAYC
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

RFX1/MA0509.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTAGCATC--
TNCCATAGCAACNN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

ATF4/MA0833.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTAGCATC----
NNATTGCATCATNN
A C G T A C G T A G T C A C G T C G T A A C T G A G T C G T C A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T